Gallus gallus (chicken): 416570
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Entry
416570 CDS
T01006
Symbol
TNRC6A
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
416570 (TNRC6A)
03036 Chromosome and associated proteins [BR:
gga03036
]
416570 (TNRC6A)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
416570 (TNRC6A)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Gene silencing
piRNA pathway
416570 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
416570
NCBI-ProteinID:
XP_015149974
CGNC:
4550
Ensembl:
ENSGALG00000006068
LinkDB
All DBs
Position
14:7229155..7271243
Genome browser
AA seq
1944 aa
AA seq
DB search
MRELEAKATKEVERKLSRAFLPHLCGTERRDLVQEEEEQLMEERKKRKEDKKKKEAAQKK
AIEQKIKVPEQTKTSVSQPQPVTSNGTSTATSTNNNAKRATANNQQQQTLPRYPPREVPP
RFRHQEQKQLLKRGQQLPVIAANLGSTPKVLNGQSGGSTVTTKQPVTNGEVPNSSKKQPD
LNHSGLGSHYENSHWGPVSSNSDSSTNWDKVIVDGSDKEAWPSITGSDPELTSECMDTDS
ASSSGSERNLIIMASGSTGGENDGIRNGIGHGSQNKFVVGSNSNNVGNGSINGPWGLSHG
TIISTCQVSVDAPDSKSESSNNRMNAWGTINSSSNGGLNPSTLNSNGNHGAWPVLENNGH
ALKGSVGSGNSGTNIQCSTVGQISNSQSINSKVGGSAHGSWGSLQENCDSEVNGTRKVSF
SGQPQNLNTEMNGPNNTTNFMTSSLPNSAGSAQINELPNNTGHGAWRVSTMNHSQIQASP
VTNGTSISHLSNGEAKNGGSYGTTWGAYGSNYSGDKCSGPNSQANGDTVNATLMQSGISG
PGSTNFQINGNKGGGVWEAGTVNSQNMPWGSGNGASAGGSRRGWGNPAQNTGTNISNGEW
SKLPSNQHSNESVNGNTRKFTNGWKSTEEDDLNSQSSAVSQITEQNSAWAKTGTGDGEGS
TESTGCHEDRVATEGQNRERRKVDQHALLQSIVNRTDLDPRVLSNSGWGQTPIKQNTAWD
TETSPRGERKTDNGTEAWGGSVTQTSSSGGCVDRPSPNNNDTSSVSGWGDPKSATRWGDS
KGSNSQGGWEEDSAATVMVKSNQSWGSGKEEKSSWNDTQKMKQGWVEGQKASQGWAVSAS
DSWGENSRSNHWGETKKSSSGGSDSDRSVSGWNEPGKSNSVTWGGSNNTNPNNSSGWDEP
AKSNQSQGWGDPPKSNQPQGWGDSSKPINSPEWNKQDVGSWGAPSATNKPPGSGWLGGPM
PAPVKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNVPNSSSSSDQ
QAQVHQQLLSSSAMSSKESSSGSGWGEPSTPATTVDNGTSAWGKPMDTGTSWGEPISDAG
GTSGWGNASLGQQAPNKPGPKSMQDSWCGDDMPLTGSRQTSWEEEEDVEIGMWNSSSSQE
ANTSLNWPPYMKKMPTKGIMKGGNKQDEAWINPFIKQFTNLSFSRESPEETIQSNKMDVS
GGILQDKRMEIDKHGLNVGDYNRVVGKGPGSRPQISKESSMDRSPYFDKDGIVADESQNM
QFMSNQNMKLPPSNSALPNQALGSLAGLGMQNLNSVRQNGNPSVFGVGNIAAQPRSMQQP
PAQPLNSSQPNPRAQVPPPLLSPQVPVSLLKYAPNNGGLSPLFGPQQVAMLNQLSQLNQL
SQISQLQRLLAQQQKVQNQRSMPSGGRQQQEQQGRSISMQQQMMQQSRQLDPNLLMKQQT
PPSQQQSLHQPTMKSFLENVIPHATPELQKGPSPINSFSSFPIGFSPISTSEIPGMNSNL
NVNMDMSSIKEPPQSRLRKWTTVDSISVNTSLEQNSSKHGAISSGFRLEESPFVPYDFMN
SSTSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKGYPNIDPETDPYVTPGSVI
NNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASNYNVSLSSTAQSTSVARNS
DSKSTWSPGSVTNTSLAHELWKVPLPPKSITAPSRPPPGLTGQKPPLSTWDNSLRLGGGW
GNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTLCMQHGPLITFHLNLPHGN
ALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFFAQGQSLTPSPGWQSLGSS
QNRLGSIDGSHSFSNRNDLNHWNGAGLSGTSSGDLHGTSLWGSPNYSTSLWGTPSSNDTR
GISSPSPINAFLSVDHLGGGGESM
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atgagagagttggaagctaaagctaccaaagaagtcgaaagaaaactaagcagggctttc
ctgcctcacttatgtggaactgagagaagggatttagtgcaagaagaggaagaacagttg
atggaagaaaggaaaaagagaaaagaagacaagaagaagaaggaagctgctcaaaaaaag
gccattgaacaaaaaatcaaagtgccagaacaaaccaagacaagtgtaagccagcctcag
cctgtcacctctaacggcacttccacagcaaccagcactaataataatgccaagcgggcc
acagccaacaatcagcagcagcaaaccttgcctcgataccctcctcgtgaagtaccaccg
cgatttcgacaccaggaacagaaacagcttctgaaacgaggtcagcagttaccagttata
gctgcaaacctgggatctactcctaaagtattaaacggccagtcaggaggcagcactgtc
acaaccaaacagccggtgaccaacggagaagtaccgaacagcagcaaaaaacagccagat
ctgaaccacagtggtctaggatcccattatgaaaattctcactggggaccagtctcttca
aatagtgactccagcacaaactgggataaagttattgtagacggctctgacaaagaagca
tggccatcaatcactggcagtgacccagagttgacatcagaatgtatggacactgactct
gcctctagctctgggtcagagagaaacctcattataatggcttcagggagcacaggtggt
gaaaatgatggcattcgaaatggcatcggacatggttctcaaaataagtttgtggttggt
agcaacagcaataatgtgggcaatggaagtattaatgggccttggggtttatcccatggg
accataataagcacatgtcaagtttctgtggatgctcctgacagcaaatctgaaagtagc
aacaatagaatgaatgcttggggcaccataaactcttcatcaaatggagggttaaatcca
agcactttgaattcaaatggcaaccatggtgcctggcctgtattggagaacaatggacat
gccctgaaagggtctgtagggagtggtaattctggcacaaatattcagtgcagtaccgta
ggtcagatatctaacagtcagagtattaactctaaagtgggtggttcagcccatggttcc
tggggaagccttcaggaaaattgtgattctgaagtaaatggtacaaggaaggtttcattc
agtgggcaacctcaaaaccttaacactgaaatgaatggaccaaataacactactaacttt
atgacctctagtttaccaaactctgctggttcagcgcagattaacgaactgcctaataat
acagggcatggggcctggcgtgtgagcacaatgaatcattctcagattcaggcctctcca
gttacaaatggcacttccatttctcaccttagcaatggtgaggcgaaaaatggtggatct
tatggtactacatggggtgcctatggttctaattactctggagacaaatgttcaggcccc
aacagccaagctaatggtgacactgtgaatgcaactctaatgcagtcaggcattagtggg
cctggcagcactaactttcaaatcaacgggaataaaggaggaggggtgtgggaagcaggg
acagtcaactcccagaatatgccatggggaagtggaaatggtgcaagtgctggcggaagt
agaagaggatggggcaaccctgcacaaaacactggcactaatatttcaaatggtgaatgg
agtaaactgcctagtaatcagcattccaatgaaagtgtaaatggaaataccaggaagttt
acaaatggatggaaatctactgaagaggatgaccttaacagccagagttctgctgtgtct
caaataactgagcagaatagtgcatgggccaaaacaggtacaggggacggtgaaggtagt
acagagagcactggatgccatgaagatagagtagctacagaaggccagaatcgagagaga
agaaaagttgaccagcatgcattactccaaagtatagtaaacagaactgacttagatcca
cgtgtcctttccaattctggttggggacagactccaatcaaacagaacactgcctgggat
accgaaacatcaccaagaggtgaaagaaaaactgacaatgggacagaggcctggggaggc
tctgtgacacagacttctagctcagggggatgtgtggatagacctagccctaataataat
gatacctcatctgtatcagggtggggagatccaaagtctgctacaaggtggggagactcc
aaagggtcaaatagccaaggggggtgggaagaggattctgctgctacagtaatggtcaag
agcaatcaatcatggggaagtggcaaagaggaaaagtcatcttggaatgacacgcagaag
atgaaacagggatgggtagaaggacaaaaggccagccagggttgggctgtttctgccagc
gacagctggggtgaaaattcaagaagtaaccattggggtgagactaagaaatccagttca
ggaggtagcgacagtgacagatcagtatctggttggaatgagccaggtaaatcaaattct
gttacttggggaggtagtaataatacaaacccaaataattcttcaggatgggatgagcct
gcaaagtctaatcagagccagggctggggagaccctcctaaatccaatcagcctcaaggc
tggggagattcatcaaagccaatcaactctccagaatggaacaaacaagacgttggatct
tggggagcaccgtctgccaccaataaaccaccgggctcaggctggctggggggaccgatg
ccagccccagtgaaggaggaggaacccactggctgggaggagccatcccctgaatcaata
cggcgcaaaatggaaattgatgatggaacttctgcttggggtgatccaagcaaatacaac
tacaaaaatgtgaacatgtggaataaaaatgtcccaaacagtagcagcagttcagaccag
caagcacaggtacatcagcagctactgtcttcaagtgccatgtctagcaaggagagcagt
tcgggttctggttggggagagccttctactccagccactactgtagataatggaacttca
gcgtggggtaagcccatggatactggtactagctggggagaacccatcagcgatgcagga
ggcacctctggctggggaaacgcttctcttggtcaacaggctccaaataaacctgggcct
aaatctatgcaagatagttggtgtggagatgatatgccattgacaggcagtcgtcagacc
agctgggaggaagaagaggatgtagagattggaatgtggaacagcagttcttcacaagaa
gctaacacatctttgaactggccaccctatatgaagaaaatgcccacaaagggaataatg
aaaggtggaaataagcaagatgaagcatggatcaatccattcattaagcaattcacaaat
ctcagtttttcaagagaatcaccagaagaaaccatacagagcaataagatggacgtgtct
ggagggatattgcaagataagagaatggagattgataagcatggcctcaatgttggagat
tacaatcgtgtggttggaaaaggccctggttctcgtcctcagatttccaaagagtcttcc
atggatcgcagtccttattttgataaggatggcattgtagcagacgagtcccaaaacatg
cagtttatgtccaatcaaaacatgaagcttcccccttcaaatagtgcactacctaaccaa
gcccttggctctctggcagggctgggtatgcaaaacttgaattctgttagacagaatggc
aatcccagtgtgtttggtgttggtaatatagcagcacagcccaggagcatgcagcagcct
ccagcacaacctcttaattcatctcagcctaatccacgtgctcaagtgcctcctccatta
ctatcccctcaggttccggtatcattactgaagtatgcaccaaacaacggtggcctgagc
ccactttttggcccacaacaggtagccatgttgaatcaactgtcccagttaaaccagctt
tctcagatctcccagttacagcggttgttggctcagcagcaaaaagtgcagaatcaaaga
agcatgccttctggtggtcgtcaacagcaggagcaacagggtcgatctattagtatgcag
caacagatgatgcaacagtcccgtcagcttgatccaaacctgttaatgaagcagcaaact
ccaccctctcaacagcagtcactccatcaacccaccatgaaatctttccttgagaatgtc
ataccccatgctactcctgagctacagaaagggccatcaccaataaattcattcagcagc
tttcctataggcttcagtccaatttctacttcagaaattccaggaatgaactcaaacttg
aatgtaaacatggatatgagcagtattaaagagccaccacaatctcgattgaggaaatgg
actacagtagacagcatttctgtgaacacatccttagagcaaaactccagcaaacatggt
gctatttcaagtggttttaggctggaagagtctccgtttgttccatatgactttatgaac
agcagtacttcaccagccagtcctcctggatctattggagatggctggccccgtgccaaa
tcgcctaatggctctagcagtgttaactggccaccagaatttcgtcctggtgagccatgg
aaaggttatccaaacatcgaccctgaaactgacccttacgtcactcctggcagtgtcata
aacaatctttcaattaatactgtgcgggaagttgaccacctcagggacaggaacagtggg
tcatcctcatctttgaacaccacgctgccttcaactagtgcctggtcatccattcgtgcc
tccaactacaatgtttccctcagcagtacagcacaaagcacttcagtagccagaaacagt
gattccaaatcaacatggtctcctggatcagtcactaacacctctctggctcatgagctg
tggaaggtccctttgccacctaaaagcatcactgctccgtcccgcccacctccagggcta
acaggccagaaaccacctttgtccacttgggataattcccttcgtttgggtggaggatgg
ggaaattctgatgccagatatacccctggttcaagctggggtgagagcagctcagggaga
ataacaaattggcttgttctaaaaaaccttacacctcagatcgatggctcaaccctgcgt
actctgtgcatgcagcacggtccactaataacattccaccttaacctcccacatggtaat
gctttggtccgttacagttcaaaagaagaggtagtgaaggcacaaaaatctctgcacatg
tgtgttttagggaacactactattcttgctgagtttgccagtgaagaggagattagtcgc
ttctttgcacaaggccagtctctgactccgtctcctggctggcaatctcttggatccagc
cagaaccgactcggatccattgatggttcccattcgttctcaaaccgtaatgatctaaat
cactggaatggtgctgggctgtcgggaactagcagtggagaccttcatggcacttcactt
tgggggagccccaactattccacgagcctgtggggcaccccgagcagcaatgacaccagg
ggaattagcagcccatcccccatcaacgctttcctttctgttgaccacctaggtggaggt
ggagagtccatgtaa
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