Gallus gallus (chicken): 416633
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Entry
416633 CDS
T01006
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
gga
Gallus gallus (chicken)
Pathway
gga05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
416633 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gga01001
]
416633 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gga04054
]
416633 (CIITA)
Enzymes [BR:
gga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
416633 (CIITA)
Protein kinases [BR:
gga01001
]
Serine/threonine kinases: Other
TAF1 family
416633 (CIITA)
Pattern recognition receptors [BR:
gga04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
416633 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
NB-ARC
LRR_14
LRR_9
nSTAND_NTPase5
RsgA_GTPase
NPHP3_N
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
416633
NCBI-ProteinID:
XP_004945373
CGNC:
50302
Ensembl:
ENSGALG00000007171
UniProt:
A0A8V0ZB38
LinkDB
All DBs
Position
14:complement(9466518..9505133)
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AA seq
1171 aa
AA seq
DB search
MMPKKLSVNLHIQEAEIGSASLPQAAELSLTFAVRVSSSQFSGGQTFSICSSAPQDDNKI
QIMDSTSVSENGYLDLLLCDIDPMHLFAFSDPKSSGNEGEFFADPEIDTYNYEQFNNMDF
LCAVENDENEDELYLSSNAKDAYARIAELAEYVLKDPHEKQVEDEFAGNLILDEMALENT
EKFTDVKMQKCHKRTFSGSAENCSDASEPKYKKIVDAPAVSTGNGCFLTMSLNSHSSDCT
SLTHQHMSFSVPTINAPGSFVIPGSSLPLIPECLPVGMKDNRENVDFVDPAQQKINYFLG
NGTSNAIRYPELTSSTELMVSPSFQVNLNGLEMFKEVQVPEILSEESSRRPRSVEAFCTS
LMDYFRDVCKSVSVEREMSLDHMYIDGTLRQSQIETKPGKNSVKSVERDSVTYSQQEKEE
AVIERSQIFQMPGGKELETKVIVVLGKAGMGKSVLVQKICQDWSNGEFPQFEFVFWFDCK
QISLPEKWYSLKDLLLDFFVRPQEGSKEIFEYILQNSTKVLLVFDGLEGLHGHENSPHCS
ASQPNKDLCRVKELLSGLIQKKILNGCTLLLTARTKEKVCQYVSKVDKTIEIVGFSPWQR
ELYISKYFEGLPSCDNALNLIKEHEYLFSHCYSPVMCRFVCFLCETILEMGDQGLPSTLT
TLFLKFVQQKIMPTQTDVTDVTLAQNQENLATLACIAWYLGEKHLSAMKSDLLPSKEVKE
FALKNGFFLPFAFPKHSDTGEEEYGTMFSDFVIQNFLGALHLILTEGIKNKSLIKYLSFP
SKKKKPYNWLHFVPRFLAGLLFLQDDTYFCSLSNKGVKKSTKKQKMLLKYIKRLQIDNLC
PERLLELLHCIYETQNSYLLQHVALRLKPDLSFLGIVLTPPDVHVLSSTLKRSRKEFSLD
LQNSSIDTHGLKDLVGLKNVVSFRASLSDTIRLWKYLEQTKDYELLRVSTEKFVLDPFKA
KTMRDIIDLSDLVEMQEIIINRVQDDSGCSSYQIPAIKNLRKLEFALGPACGLQGFLKLV
EILAAFPSLQHLDLDALSENGIGDEGAKSLSEVFPTLTSLETLNLSQNKITDVGAEKLAT
ALPSLSSLTTLSLYNNSICDFGAENLAKVLPAMASLRVLDIQYNKITDVGAQQLTDSLRK
CPHIKNLVMWNPTIPYGVLEHLQQLDSRISV
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaaaaaaactctctgtaaacctccatatccaagaagctgagattgggtctgcc
tctcttccccaagctgcagaactctcactgacgtttgctgtgagagtaagcagttcccag
ttttctggagggcagaccttcagcatatgctcttctgctccacaagatgacaacaagata
caaatcatggattcaacatctgtgtctgaaaatggctatcttgatttgctgctctgtgat
attgatccaatgcatctatttgcattctcagatcctaagtcatctggaaatgaaggtgaa
ttctttgcagatcctgaaattgatacctacaactatgaacaattcaataatatggatttc
ctgtgtgcagtggaaaatgatgaaaatgaggatgaattgtatctctcttccaatgccaaa
gatgcttatgctagaatagctgaattagcagaatatgtgctcaaggatcctcatgagaag
caggtggaagatgaatttgcagggaaccttattttggatgaaatggctcttgaaaacact
gagaaattcactgatgtaaagatgcagaaatgtcacaaaagaaccttttcaggctctgca
gagaattgctctgatgcttctgaacctaaatacaagaaaattgtggatgcccctgcagta
tcaacagggaatggatgtttccttacgatgtctctcaacagccattcatctgactgcacc
tcactaactcaccagcacatgtccttttctgttcccactatcaatgcaccgggaagtttt
gtaattcctgggtcttcactgcctttgattccagagtgtctgccagtaggcatgaaagac
aacagagagaatgtagactttgtggatcctgctcagcagaaaattaattattttcttgga
aatggcacatctaatgctataagatatccagaactgacttcctccactgaattaatggta
tccccaagttttcaagttaatttaaatggcttagaaatgttcaaagaagtccaagttcca
gaaattctttctgaagaatcttcaagaagaccaagatcagtggaagctttctgtacatca
cttatggattacttccgagacgtatgcaaatctgtgtctgtggagcgtgaaatgtctctt
gatcacatgtatattgatggtacgcttaggcaaagccaaattgaaaccaagcctgggaag
aacagtgtaaaatcagtggaaagagattcagtaacttacagtcagcaagagaaggaagag
gcagtaattgaaagaagccaaatatttcaaatgccaggaggtaaagagttagagactaaa
gtgattgtggtgctgggaaaagcaggaatgggcaaaagcgttcttgttcagaagatctgc
caggactggtccaatggagagtttcctcagtttgaatttgtcttttggtttgactgcaaa
caaataagcttgcctgagaagtggtacagcttgaaggatctacttcttgattttttcgta
agacctcaggagggaagcaaagagatcttcgagtacatacttcaaaattctactaaagtc
cttctggtttttgatggtttggaagggttgcatggccatgagaattctcctcactgctca
gccagccagcctaacaaagacctgtgccgcgtgaaggagctgctttcaggactcatccaa
aagaagatactcaatggctgtactttattacttacagcaagaacaaaagaaaaggtgtgc
cagtatgtgtccaaagtagataagactattgaaatagtaggattctccccttggcagaga
gaactgtacatatccaaatactttgaaggattaccctcgtgcgataatgcactgaattta
atcaaagagcatgaatacctcttcagtcattgttacagccctgttatgtgtagatttgtt
tgttttctctgtgagacaatacttgaaatgggagatcaaggccttccttcaactcttact
acactcttcctgaaatttgttcagcaaaaaataatgcctacacaaacagatgttacagat
gttacacttgctcaaaaccaagagaatcttgctacactagcctgtatagcctggtatctt
ggagaaaagcacctaagtgccatgaaaagtgatcttcttccttctaaagaagttaaagag
tttgctctgaaaaatggatttttcctgccatttgcattccccaaacattcagatacggga
gaagaggaatatgggaccatgttctctgattttgtcatccagaatttcttgggtgcactt
caccttatattaacagaaggcatcaagaacaaaagtctaataaagtacctctcttttcca
tccaaaaagaagaaaccttataactggctacatttcgtgcctcgatttttggctggattg
ttattcctccaggatgacacctacttctgctccctttcaaacaagggtgtaaaaaaatca
accaagaagcagaaaatgctcctgaaatatattaaaaggttgcaaatagacaacctctgt
ccagagaggttacttgagcttttgcactgtatttatgaaacacaaaacagttatctcttg
cagcatgtggccttacggctcaagccagacctgtcctttctgggcattgttcttacacca
cctgatgtccatgtactgtcctctactttaaaaaggtcaagaaaagaattttccttggat
ttgcaaaacagcagtattgacacacacgggctaaaagacttggttggcctgaagaatgtg
gtgtcattcagggcctccctcagtgatacaatcaggctatggaaatacttagaacagaca
aaagactatgaactgctgagagtgtcaacagaaaaatttgttcttgatccctttaaggca
aaaacaatgagagacatcattgacctttctgaccttgtagaaatgcaggagataataatc
aatcgtgtgcaagatgactctggttgcagcagctatcaaattcctgccataaaaaacttg
agaaaactagaatttgctctgggtccagcgtgtggccttcaaggattcctaaaactcgtg
gaaattcttgcagcatttccatcactgcagcatttagaccttgatgctctgagtgaaaat
ggcataggagatgaaggagcaaagagtctgtctgaagtctttccaacactgacatcactg
gaaacattaaacttgtcacagaataagataacagatgtgggtgcagagaaactggctaca
gctcttccctccttgtcttcattaacaacactaagcttatacaataatagcatttgtgat
tttggagcggaaaaccttgcaaaagtccttcctgcaatggcttctttaagagtgctagac
attcagtataacaaaataactgatgttggagcccaacagctgactgacagcctaagaaaa
tgtccccatataaaaaatttggtgatgtggaatcctacaattccatatggagttcttgaa
caccttcagcagctggactctaggatcagcgtgtag
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integrated database retrieval system
