Gallus gallus (chicken): 416765
Help
Entry
416765 CDS
T01006
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X5
KO
K04646
clathrin heavy chain
Organism
gga
Gallus gallus (chicken)
Pathway
gga04142
Lysosome
gga04144
Endocytosis
gga05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
416765 (CLTCL1)
04142 Lysosome
416765 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
416765 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gga04131
]
416765 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gga04147
]
416765 (CLTCL1)
Membrane trafficking [BR:
gga04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
416765 (CLTCL1)
Exosome [BR:
gga04147
]
Exosomal proteins
Proteins found in most exosomes
416765 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
416765
NCBI-ProteinID:
XP_004945535
CGNC:
887
Ensembl:
ENSGALG00000041760
LinkDB
All DBs
Position
15:complement(336494..375994)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHFQLQSLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPAT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHVYDLESGVCIYMNRISA
DTIFVTASHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGSYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGHASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQDE
EPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNDNWEDLVKFLQMARKKARESYVETELIFAFAKTNRLSELEEFISGPNNAHIQQ
VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGREFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWREGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFS
KVNQLLLVKPYLRSVQNHNNKGVNEALNNLLTEEEDYQGLRASIDAYNNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDHLYKDAMQYAAESKDVELAEKLLQWFLEE
GKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFYKVDNL
DASESLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQTNFPYGFTAPGFTQPPVYGFNV
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccattcgcttccaggagcacttccagctccaaagtttgggtatt
aacccagcaaacattggattcagcaccctaacaatggaatctgacaagttcatttgcatc
agagagaaagtgggagagcaggcacaagtagtaataattgacatgagtgatccagcaaca
cccatcagacgtccaatttctgctgaaagtgccataatgaatccggcctctaaagtaatt
gcactaaaagctgggaaaacacttcagatctttaacattgagatgaaaagtaaaatgaaa
gcccacaccatggcagaggaggtgatcttctggaaatggatatctgtgaatacagttgcc
ttggtgacagagacagcagtttaccactggagcatggagggagaatctcagccccaaaag
atgtttgacagacacgctagtcttgcaggctgccaaatcatcaattatagaactgatgaa
catcaaaaatggctgttgctgataggaatttcagcacagcaaaatcgtgtggttggtgca
atgcagctgtactctgttgatagaaaagtctcccagcctatagagggccatgcagcagct
tttgcagaattcaaaatagagggaaatgccaaaccttccacactcttttgttttgctgtg
aggagtcctgcaggaggcaagcttcacataattgaagtgggtcaaccagctactggaaat
cagccatttgttaagaaagctgttgatgtatttttcccacctgaggcacagacggacttt
cctgtggcaatgcagattggaattaagcacggtgttatctacctgatcacaaaatatgga
tatattcacgtgtatgacttggagtctggagtttgcatctacatgaaccgtattagtgcc
gacactatttttgtcacagcttctcatgaacctacctcaggcattattggtgtcaacaaa
aaaggacaggtgctttctgtatgtgttgaggaagacaacattgtgaactatgctacaaat
gttctccagaatcctgacttgggcctgcgtatggctatacgtagtaatcttgctggtgca
gaggaattatttgccagaaagtttaacacgctgtttgctcaaggaagctatgcagatgct
gctaaagtagctgcatctgcaccaaagggaattctacgtaccagtgatacaatcaggaag
ttccagagtgtaccagctcagccagggcatgcgtctcccctgctccagtactttggaata
ttgcttgatcagggacagctgaacaaatttgagtctcttgagctctgtcgccctgttctg
cagcaaggccgcaagcagcttctggagaaatggctgaaggaagacaagctggagtgttca
gaggagctgggagacttggtgaagacagctgacccaacccttgcacttagtgtctatctt
cgtgctaatgtgccaaacaaagtgattcagtgctttgctgaaactggtcaattccagaaa
atagtactgtatgctaaaaaggttggatataccccagactggatcttcttgctgagaagt
gtgatgagagtcagtcctgagcagggtctgcagttttctcagatgctggtacaggatgag
gagccactggctaacattaaccagattgtggatgtgttcatggagaacagtcttattcag
caatgcacatcctttctgttggatgctttgaaaaataaccgcccagcagaaggccacctt
cagactcgtctgctggaaatgaatttgattcatgccccacaggttgcagatgccatcctt
ggaaaccaaatgtttacgcactatgatcgtgctcatattgcccagttatgtgaaaaggca
ggcttgctccagcgagctttggagcactacactgatctctatgatattaaacgtgctgtc
gttcatactcatctcttgaatcctgagtggcttgtgaatttctttggctctctctctgtt
gaagactctgtagaatgcttgcgtgctatgctgtcagccaacattaggcaaaacctacaa
ctctgtgtacaggttgcttctaagtaccatgagcagcttggcacccagtctcttgtggag
ctttttgaatctttcaaaagctatgaaggactgttctatttcttgggttccattgtaaac
ttcagtcaggatccagatgttcacttcaaatatatccaggcagcttgcaagactggtcag
ataaaggaagtagaaagaatctgccgtgaaagtaactgctataacccagaaagggtgaaa
aactttctgaaggaggcaaagctgacagaccagcttcctctgatcattgtctgtgatcga
ttcgactttgttcatgacctggtgctctacttatatcgcaatagcctgcagaagtatata
gagatctatgtacagaaggtgaaccccagccgcataccagcagtggttggagggcttctt
gatgtggattgttctgaagatgtcattaagaacttgatcatggtggttagaggccagttc
tcaacagatgagctggtggctgaagtggaaaaaagaaatcggcttaaattgctgttgcca
tggcttgaatcaaggattcatgaaggctgtgaagaacctgcgactcataatgccttggcc
aaaatctacattgacagtaataataatccagagcggttccttcgtgagaatccgtactat
gacagtcgtgtagttggcaaatactgtgaaaagagagaccctcatctggcctgcgttgca
tatgagaggggccagtgtgatctggaactcataaaggtttgcaatgagaactcactattt
aagagtgaggctcgctacctagtacgcaggaaggaccctgaactctgggcaaatgttcta
gaagaaaacaacccattcaggcgccagcttattgaccaggttgtccaaacagctttatca
gagacacaggatccagaggaggtttctgtcactgtgaaagctttcatgactgcagacctg
ccgaatgaattaattgagttattggaaaaaattgtcttggataattctgtattcagcgaa
cacaggaatctccagaatctgctgatcctgactgccattaaggctgaccgcactcgtgta
atggaatacattaatcgactggataactatgatgccccagatattgcaaacattgccatc
agtaatgagctgtatgaagaagcctttgctatattcagaaaatttgatgttaatacttca
gcagttcaggtgctgattgagcacattgggaatttagaccgtgcttatgaatttgcagag
agatgtaatgagccagcagtatggagccagctagccagagcacagctgcagaaagacttg
gtaaaagaagctattgactcctatataaaggcagatgacccatctgcctacatggaagtt
gttcaagcagctaatagaaacgacaactgggaggacctagtcaagttcttgcagatggcc
aggaagaaggctagagagtcttatgtagagacagaacttatttttgcctttgcgaaaact
aatcgtctctcagaactggaggaatttattagcggccctaataatgcccatatacagcag
gttggtgatcgttgttatgaagagggtatgtatgaagcagcaaaactactctataacaat
gtatccaactttgctcgcttggcatctacattggtgcaccttggggagtatcaggcagca
gtggacagtggccgtaaggccaacagcacaaggacttggaaggaggtatgttttgcctgt
gtggatggaagagaattccgcttggcacagatatgtggcttgcacatagtcatccatgct
gatgaacttgaagagctgattagttactatcaggatcgtggctactttgaagagctgatt
gcccttctggaagctgctttgggcctagagcgtgctcacatgggaatgtttactgaactt
gccatcttatactccaaatttaagcctcagaaaatgagggaacatctggaactcttctgg
tctagagttaatattccaaaggtgctcagagctgcagaacaggctcatctctgggcagaa
cttgtattcctctatgacaaatatgaggagtatgacaatgcaataattactatgatgaat
catcccactgatgcctggagggaaggacagtttaaagacataattgccaaggtggcgaac
gtggagctatattacaaagccttgcagttctacttagactacaaacctctgctgatcaat
gatcttctgcttgtattatctccacgactggatcacaccaggacagtcaattttttctcg
aaggttaatcagctgcttctagtaaagccttatttgcgttcagtgcaaaaccacaataat
aaaggagttaatgaagctctaaacaaccttttaacagaggaggaggactaccagggtttg
agagcttccattgatgcctacaacaactttgataacataactttggctcagcgtctggaa
aagcatgagctaattgaatttaggcgtattgcagcatacttgtataagggtaacaatcgc
tggaagcagagtgtggaactatgcaagaaagaccatctgtataaggatgctatgcagtat
gctgcagagtccaaagatgtagaactagcagaaaagctgcttcagtggttcctggaagaa
ggcaagcaggagtgttttgcagcctgccttttcacatgttacgacttgctgcacccagat
gtagtccttgaattggcatggaggcataatatcatggacttcgcaatgccttatttcatc
caagtgatgagagagtacctcaccaaagttgatgggctgttctataaggtggataatctt
gatgcttctgaaagcctaagaaaagaagaggaacaagtaactgaacctactccaatagta
tttggccagcagttgatgttaacagcaggccccagtgcagtaccgccccagacaaacttt
ccatatggattcacagcaccaggattcacccagccacctgtttatggtttcaatgtgtaa
DBGET
integrated database retrieval system
