Gallus gallus (chicken): 417019
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Entry
417019 CDS
T01006
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
gga
Gallus gallus (chicken)
Pathway
gga03013
Nucleocytoplasmic transport
gga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
417019 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
417019 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
417019 (THOC5)
03041 Spliceosome [BR:
gga03041
]
417019 (THOC5)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
417019 (THOC5)
Spliceosome [BR:
gga03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
417019 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
417019
NCBI-ProteinID:
NP_001006195
CGNC:
6120
Ensembl:
ENSGALG00000029223
UniProt:
Q5ZJK1
LinkDB
All DBs
Position
15:11112857..11124406
Genome browser
AA seq
682 aa
AA seq
DB search
MSSDSKKRKPKVIRTDGGPQEGKRGKADGEQDARYYSEECEVDLRDPIKDYELYKETCQE
LQRLMAEIQELKSRGVKDNASEIDERRVQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQ
KVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYSEAPTEISRPDITLT
EPHQQTLARLDWELEQRKRLAERYKECQTIKEKILKEIEVKKEYLSSLQPRLNSIMQASL
PVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIEGSVEEAKALY
KPPEDSQDDESDSDMEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVTVDLKCKDENVLH
LTFYYLMNLNIMTVKTKVTTAAELTTAISAGDLLSPDSLLSCLYPGDHGKKTPNPANQFQ
FDKVGILTLSDYVTELGHPYVWVQKLGGLHFPKDQPQHTVTADNSLSASHMEMTMKLLRT
RLQSRLALHKQFASLEHGVVPVSSECQHLFPTKIVSRLVKWTAIPFEDYTELPYTKDVVE
AGLAEDTHLYYMALIERGTAKLQAAVVLNPGYSALPPIFSLCLNWKGERTGSNDDNIRAM
ESEVNVCYKELWGPKPGYQLLTNQLQRLCMVLDVYLETEPHDTTVEGPKEFPQEKMCLRL
VRGPMRLKPFKFNYPQGFFSHR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggacagcaagaagaggaagcccaaggtgatccgcacggacgggggcccgcag
gagggcaagcggggcaaggccgatggcgaacaggatgctcggtactacagtgaggagtgt
gaggtggatctccgggaccccatcaaggactatgagctttacaaagagacgtgccaggag
cttcagaggctcatggcagaaatccaggagctgaagagcagaggcgtcaaggacaatgcc
tccgagatagacgagcgacgcgttcagagctgtgtgcacttcatgaccctgaagaagctc
aaccggctggctcacattcggctgaagaagggccgtgatcagacccatgaggcaaagcag
aaggttgatgcctatcacctgcagctccagaatttgctttatgaagtgatgcatctacaa
aaagagatcaccaaatgcctggagttcaaatcaaagcatgaggagatcgaactggtgagc
ctggaggagttttacagtgaggctcccactgaaatcagtcgacctgacatcaccctgact
gaaccccaccagcagacccttgcccgcctggactgggaactggagcagcgtaagaggctg
gcagagaggtacaaggaatgccagaccatcaaggagaagatcctaaaggagattgaagtg
aaaaaggagtatctgagcagcctccagcctcgcctcaacagcattatgcaggcctccctg
cctgtccaggagtacctcttcatgcctttcgaccaagcacacaagcagtacgagacagcc
cgacacctgccaccgcctctctatgttctttttgttcaagccagtgcctatggtcaggcc
tgtgataagaagcttgttgtggccattgaaggcagtgtagaggaagccaaagccttgtac
aagccacctgaggactcgcaggatgatgagagtgattctgacatggaggaagagcagacc
acgaagcgacgcaggcccaccctgggtgtgcagctggatgacaaacgcaaggagatgctc
aagcggcacccactgtctgtcactgttgacctgaagtgcaaagatgagaatgtgcttcac
ctgaccttctactacttgatgaacctcaacatcatgacggtgaagaccaaggtgaccact
gctgctgaactgacaactgccatcagtgctggcgacttgctctccccagactcccttctg
agctgcctgtacccgggagaccatgggaagaaaacccccaatccagccaaccaattccag
tttgacaaagtgggcatcctgaccctgagtgactatgtgacagagctgggacatccctat
gtgtgggtgcagaagctgggaggcctgcatttccccaaggatcagcctcagcatacggtg
actgcagacaactcgctgagcgcgagccacatggagatgaccatgaagctgctgcggacg
aggctgcagtcccgcctggctctccacaagcagtttgcttctcttgagcatggcgtggtg
cccgtgtccagcgagtgccagcatctcttccctaccaagatcgtctcacgcctggtgaag
tggactgccatcccttttgaagattacacggagctgccctacactaaagacgtggtggag
gctgggctggctgaagacacccatctctattacatggcactgatagagaggggaacagcc
aagctccaggctgctgtggtcctgaatcccggttactccgcactgccacccatcttcagc
ctctgcctgaactggaaaggagagcgaaccggcagcaatgacgacaacattcgggctatg
gagagtgaagtcaacgtgtgctataaggagctgtgggggcccaaaccgggctaccagctc
ctcaccaatcagctgcagcgcctctgcatggtgctagacgtctacctggagacagagccc
cacgacaccactgtggagggacccaaagagttcccccaggagaagatgtgcctccgtctg
gtcaggggccccatgcgcttgaagccgttcaagttcaactaccctcaggggttcttcagc
caccgctga
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integrated database retrieval system
