KEGG   Gallus gallus (chicken): 417182
Entry
417182            CDS       T01006                                 
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
gga  Gallus gallus (chicken)
Pathway
gga03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    417182 (EXOSC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gga03019]
    417182 (EXOSC2)
Messenger RNA biogenesis [BR:gga03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     417182 (EXOSC2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     417182 (EXOSC2)
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N ECR1_N_2 EXOSC1 RRP40_S1
Other DBs
NCBI-GeneID: 417182
NCBI-ProteinID: NP_001012816
CGNC: 2847
Ensembl: ENSGALG00000040373
UniProt: A0A1L1RZU7 Q5ZHN8
LinkDB
Position
17:6263125..6267631
AA seq 294 aa
MAAVAMRLPVIRKAVGPSGPRGGEKHLVVPGDTITTDTGYMRGHGTYVDEEKLVASVAGA
VERVNKLVCVTPLKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGE
LRRRSAEDELAMRDYLQEGDLISAEVQSVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGFIWIYPTPEQKDEEAGGFTTNLEPVPLSDREVISRLRN
CVVALVTQKLMLFDTSILYCYEASLPHQIKDILKPEVMEEIVLETRQKLLDLEG
NT seq 885 nt   +upstreamnt  +downstreamnt
atggcggcggtggccatgaggctgccggtgatccgcaaagcggtggggccgagcgggccg
cggggcggcgagaagcacctggtggtgcccggagacaccatcactacggacacgggatac
atgaggggccacggcacgtacgtggacgaggagaagctcgtcgcctcggtcgccggtgct
gtggagagggtgaacaagctggtgtgcgtcacgccgctgaagaccagatacaacggcgag
gtcggagacatcgtggtcgggcggatcacggaggttcagcagaaacgatggaaagtggaa
accaattccaggctggattcagtcctgttgttgtcgtctatgaatttacctggtggggaa
ctgagaaggagatcggcagaagacgagcttgcgatgagggactatctgcaggaaggggac
ctcatcagtgcagaggtccagtctgtattttctgatggggctgtatcgctgcacaccagg
agtctgaaatacgggaagcttggccagggtgtgcttgttcaggtctctccctcccttgtg
aaacgccagaagactcacttccatgacttgccctgtggtgcatctgtgatcctcggcaac
aacggttttatctggatctacccaactccagaacagaaagatgaagaagcagggggcttt
acaaccaacttagagccagttcccctgtctgaccgggaggtgatctcacggctccgaaac
tgcgttgtagctctggttactcagaagttgatgctctttgacactagcatcctgtactgc
tatgaggcgtcccttcctcatcagatcaaagacattctcaaaccggaggtgatggaggag
atcgttctggaaacccgacagaaactgctggatctagagggatag

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