KEGG   Gallus gallus (chicken): 417212
Entry
417212            CDS       T01006                                 
Symbol
GLE1
Name
(RefSeq) nucleoporin GLE1 isoform X1
  KO
K18723  nucleoporin GLE1
Organism
gga  Gallus gallus (chicken)
Pathway
gga03013  Nucleocytoplasmic transport
gga03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    417212 (GLE1)
   03015 mRNA surveillance pathway
    417212 (GLE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gga03019]
    417212 (GLE1)
Messenger RNA biogenesis [BR:gga03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     417212 (GLE1)
SSDB
Motif
Pfam: GLE1 DUF1488 SBB_T7
Other DBs
NCBI-GeneID: 417212
NCBI-ProteinID: XP_004945891
CGNC: 3512
Ensembl: ENSGALG00000004738
LinkDB
Position
17:5499430..5509921
AA seq 750 aa
MAAPLGKRKSLCARRGSGAAYEGAGSAMQARELRWETLEALRASSKGRLKYFRHSDKDED
ILEGCISPLTLTSYAGWVLDRMTASSAQAAAPSSSAPGGAAPHTDPTAQESSASACEGPA
KPSAAARSEAKGSSDPGVLEVNQEVLPIPPVSKMAKVEGCIQMYEEIYRMKGRLCLCFLL
VDSGATLWCFWHLCILQERLRQRQEQQEQLVRAAYDMAREQLKRFDEMKELKRRQEIQEL
REVMEKSLKETQGQQEKLKEEHRHRAKILNLKLREAEQQRQRQEEQERLRREEGQERLRR
LYSIQEELLQLNQQIDPNYKHKDLPKIDLSAYSNRGNQICGLVSGLIRTTSERGFPSQMD
VANTEQALKEMRGLISRMQQEIAAAVEEKKRRDEQEKKQKQEELLKKQQAEAQTPAPAQP
SGGKQQKEALSVKAREGTMKWYQQLQDAAAQCAAAFSAMSSSKDSEVRKIRMELQKAVTI
PVSQISTIAGSQLRQIFDKLNNLLSGKPVQSVGETVLVTQLPQGLDFVYYKLAEKFVKQG
EEEVASHRESAFPIALVISGIWEMHPRVGDLFLAHLHRVCPYSVPFYPAYKEGASMEEYQ
RMLGYLVQDSKMEEEDHFLKRMSGLIRLYAALIQLRWPYGNKQGTHPHGLSYGWCWLAQM
LNMEPLVVVTATLLYDFLEVCGNALMKHYHVQFWKLLLLMQEEYIPRIEAITNVGQKASL
TRFKQFLEESLQKKDIPLPKGFLQPSFWRS
NT seq 2253 nt   +upstreamnt  +downstreamnt
atggcggcgccgctggggaagcggaagtcgctgtgcgcccggcggggcagcggcgcggcc
tatgaaggcgcggggtcggccatgcaggcgagggagctccgctgggagacgctggaagcc
ctgcgcgcctccagcaaaggccggctgaagtacttccgccactcggacaaagacgaggat
atcttggaaggatgtatttctcctctgacgctgacctcttatgccggctgggtcctggat
cggatgaccgcttcgtcagcccaggcagcggcaccttccagctctgcgcccggaggtgcg
gcccctcacacagatccgactgctcaggagagctcagcgtccgcctgcgagggccccgcg
aagccctcagccgcagcacggagcgaagcgaagggaagcagtgatcccggtgtgctggaa
gtgaatcaagaagtccttccgatacctcctgtatctaaaatggcaaaagttgaaggctgc
attcagatgtacgaagagatatacaggatgaaaggaaggctttgtctgtgtttccttctg
gtggattcgggtgctacattgtggtgcttctggcacctgtgcatcctgcaggagaggctc
cggcagcggcaggagcagcaggagcagctggtgagggcagcgtacgacatggcgagagaa
cagctgaaacgttttgatgaaatgaaggagctgaagcggcgtcaggagatccaagagctg
cgggaggtgatggagaagagtttaaaggaaactcaggggcagcaagagaagctgaaagaa
gagcaccgacacagagcgaagatactgaacctaaagctgcgtgaggcagagcagcagagg
cagcgccaggaagagcaggagcgactgcgtagggaagaaggccaggaaagattacgtcgc
ctttattcaattcaggaggaactgctgcagctgaaccagcagattgatcccaattacaag
cacaaggacttgccaaaaattgacctttctgcatacagtaatcgaggcaaccagatctgc
gggctggtgtcaggactcatccgcaccactagtgagagaggtttcccttctcaaatggat
gtggccaatactgaacaagccctgaaggaaatgcgagggctgatctccagaatgcagcaa
gaaatcgctgcagctgtggaagaaaagaagaggagagatgagcaggaaaagaaacagaag
caggaggagttactgaagaagcagcaggcagaagctcagactcctgcccctgcgcagcca
tcgggaggaaagcagcagaaggaagccctctcggttaaggcgagggaaggcaccatgaag
tggtaccaacagcttcaagatgctgcagcccaatgtgctgctgctttcagtgcaatgagc
agctccaaagacagcgaggttaggaagataagaatggaactgcagaaagcagttaccatc
cctgtgagccagatctctaccattgcaggctctcagctaagacagatatttgacaagctc
aataacttgctctctggaaagcctgttcagagcgtaggggaaactgtattggtgactcag
ctcccacaaggcctggattttgtttattacaagcttgcagagaaatttgtgaaacaagga
gaagaagaagtagcttctcaccgtgagtcagctttcccaattgcactggtgatatcagga
atctgggaaatgcaccctcgagtcggagatctctttttagctcatctgcaccgggtgtgc
ccctattctgtgccgttctaccctgcatacaaggagggggcttctatggaagaatatcag
aggatgctcgggtatctagttcaggattctaagatggaagaggaagatcattttcttaaa
cggatgtcaggactgattcgtctgtatgccgctctcattcagctccgctggccttatggg
aacaaacaagggacacacccccatgggctgagctatgggtggtgctggcttgctcagatg
ctgaacatggagcctctggtggttgtgacagccacacttctgtatgattttctggaggtg
tgtggcaatgctctcatgaaacactaccacgttcagttctggaaactgttgttgctgatg
caagaagaatatatcccacggattgaagccattaccaacgttggacagaaggcctcttta
acacgtttcaagcaattcctggaggaaagtctgcagaagaaagacatcccattaccaaag
ggctttctgcagccttccttctggaggtcctga

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