KEGG   Gallus gallus (chicken): 417254
Entry
417254            CDS       T01006                                 
Symbol
NELFB
Name
(RefSeq) negative elongation factor B
  KO
K15180  negative elongation factor B
Organism
gga  Gallus gallus (chicken)
Pathway
gga03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    417254 (NELFB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gga03021]
    417254 (NELFB)
Transcription machinery [BR:gga03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     417254 (NELFB)
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 417254
NCBI-ProteinID: NP_001006202
CGNC: 50465
Ensembl: ENSGALG00000008532
UniProt: Q5ZLK9
LinkDB
Position
17:2266800..2277936
AA seq 577 aa
MYAGLQELGVANGEDLKETLTNCTEPLKAIEQFQTENGVLLPSLQSALPFLDLHGTPRLE
FHQSVFDELREKLLERVSAIALEGKVEERYKKLEDLLEKSFSLVKMPSIQPVVMCVMKHL
PKVPEKKLKLVMADKDLYKACAVEVKRQIWQDNQALFGDEVSPLLKQYILEKENILFSND
ISVLHNFFSPSPKARRQGEVVQKLTQMIGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAE
LLMSLHDLEISEICTVDPCHKFTWCLDACIREKFVDNKRARELQGFLDGVKKGQEQVLGD
LSMILCDPFAINTLALSTIRHLQDLVGQDTLPRESPDLLLLLRMLSLGQGAWDMIDSQVF
KEPKMEAELITKFLPMLMSFVVDDHTFNVDQKLPSEEKGPIPYPSTIPEAFTKFLQENRI
ACEIGLYYILHITKQRNKNAFLRLLPALVETFSDLAFSDIFLHLLTGNLTLLGDEFAVEE
FCTSLFDGFFLTACSRKENVHRHVLRLLLHLHHKVVPAKLESLQKALEPTKQSGEAVKEL
HNQLTEKLELRKPSPAEVTETPSMELPLPTVPTPASR
NT seq 1734 nt   +upstreamnt  +downstreamnt
atgtacgcggggctgcaggagctgggggtggccaacggcgaggatctcaaggagacgctg
accaactgcacggagccgctgaaggccatcgagcagttccagacagaaaatggggtcctg
ctgccctcgctgcagtcggccctgcccttcctggacctgcacggcactccccggctggag
ttccaccagtcggtgtttgacgagctgagggagaagctgctggagcgggtctcggccatc
gccttggaagggaaggtggaggaaaggtacaagaagctggaagatctcctggagaaaagc
ttttccttggtcaagatgccttccatacagcctgtggtaatgtgtgtcatgaagcacttg
cccaaggtgcctgagaagaagctgaagttagtaatggctgataaggatttgtataaagca
tgtgcagtggaggtgaagcgccagatttggcaggataaccaggctctgtttggtgatgag
gtatctccactgctgaagcagtatatcctggagaaagaaaatattctgttcagcaatgat
atttctgtcctgcacaacttcttcagtccatctcccaaagcaagacgtcagggagaggtg
gttcagaagctgactcagatgattgggaagaatgtgaagctctatgacatggtgttgcag
ttcctgagaactttattcctccggacaaggaatgtgcattactgcacgctgcgggcagag
ctcctgatgtcactgcatgatctggaaatcagtgaaatctgcactgttgacccctgtcat
aagttcacgtggtgccttgatgcctgcattcgggagaagtttgtggacaacaagagagct
cgggaattgcaaggctttctggatggagtgaagaaaggacaagagcaagttttgggggac
ttatcgatgatcttgtgtgatccctttgccattaacaccttagccctgagtaccataagg
cacctgcaggacctagttgggcaggacaccttacccagggaaagcccagatctgctgctg
ctccttaggatgctgtctttaggacagggagcctgggacatgattgacagtcaagtcttc
aaggaaccaaaaatggaagctgagttgatcacgaagttcttgcctatgctgatgtccttt
gtggtggatgatcacacgttcaatgtagatcagaaactgccctcggaggaaaaggggccg
attccctaccccagcaccattcctgaggctttcaccaaattcttgcaggagaacagaata
gcttgtgagattgggctatactatatccttcacataactaaacagaggaacaagaatgct
ttcctcagactcctgccagcactagtcgagacattcagcgacttggccttcagtgatata
tttctgcatctgctcactggtaacctcacactgctgggtgatgaatttgcagttgaagag
ttctgcaccagtctctttgatggcttctttctcactgcatgctcaagaaaggagaatgta
cacagacatgtgctaagattgctgcttcatctgcatcacaaagtggtgcctgccaaatta
gagtctctccagaaggctttggaacccaccaaacagagtggggaggctgtgaaggagctt
cataaccagctcactgagaaactggagcttcgcaagcccagccctgccgaagtgaccgag
accccctccatggaactgcccttgcccactgtgcccacaccagcctcacgctga

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