Gallus gallus (chicken): 417270
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Entry
417270 CDS
T01006
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
gga
Gallus gallus (chicken)
Pathway
gga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
417270 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gga03041
]
417270 (PRPF4)
Spliceosome [BR:
gga03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
417270 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_Aladin
NBCH_WD40
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
417270
NCBI-ProteinID:
XP_415544
CGNC:
6724
Ensembl:
ENSGALG00000008857
UniProt:
F1NNQ9
LinkDB
All DBs
Position
17:complement(1836501..1844582)
Genome browser
AA seq
537 aa
AA seq
DB search
MASVRAPVARGGARPAPVRAPAPPEPTKSKPSEEGDAPPAKRAPIFYGSLEEKERERLAK
GESGLLGKEGMKAALEAGNINISSGEVFELEDHMSERQAEVLAEFERRKRARQINVSTDD
SEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDALKKTRKDDDRSKKSKEEYQQT
WYHEGPRSLKTARLWLANYSLPRAVKRLEEARLLKEIPEATRTSQRQELHKSLRSLNNFC
SQIGDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNLVHTLRGHSTNVGAIVFHPKA
TVSLDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMRVARVMWHPSGRFLGTTCYDH
SWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGLDAFGRVWDLRTGRCIMFLEG
HLKEIYGLNFSPNGYHVATGSGDNTCKVWDLRQRKCIYTIPAHQNLVTGVKFEPNHGNFL
LTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQLIATCSYDRTFKLWTAE
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgtgcgggcaccggtggcgcgcggcggggctcggccagctcctgtgagggct
cccgcgccgcctgagcccacaaagagcaaaccatcagaagagggcgatgctccccctgct
aagagagcgcccatattctatggcagcctggaggagaaggagcgggagcggctggcgaag
ggggagtccgggctgctggggaaggaagggatgaaggctgccctcgaggccggcaacatc
aacatcagcagtggtgaggtcttcgaattggaggatcacatgagcgagcggcaggcggaa
gtcttggctgagtttgagcgcaggaagcgagcccggcaaatcaacgtctccacggatgat
tctgaagtgaaagcctgcctgagagccctcggggagcccataacgctctttggagaaggt
cctgcagagaggagggagagattaagaaatatcctctcagtggtcggcacagatgcatta
aaaaagacgaggaaagatgatgacaggtctaaaaagtctaaagaagagtatcagcaaaca
tggtaccatgaaggaccacgtagtttgaaaacagcaaggctgtggcttgctaactattcg
cttcccagggcagtgaagcgtctagaagaagcccggctgctcaaagagattccagaggca
accaggacatcgcagagacaagaactacacaaatccttacgatccttgaataacttctgt
agtcagattggggatgatcgcccactgtcctactgccacttcagccccaattccaaactc
ttggctactgcctgttggagtggactgtgcaagctgtggtctgtgcctgactgcaacctt
gttcacaccttacgaggacatagcaccaatgtaggagccatagtcttccatcccaaagcc
actgtctccctcgacaagaaggacgttaacttggcctcatgtgcagctgatggttctgtc
aaactctggagtcttgaaagtgatgagccagtggcagatattgaaggacacagcatgaga
gtggctcgtgtgatgtggcacccttctgggaggttcctgggcactacctgttatgatcac
tcatggcgcttgtgggacttggaagcccaggaagagattctccatcaggaggggcacagc
aaaggggtctatgacattgcctttcacacggatgggtctcttgctgggactggtgggctg
gatgcttttggccgagtgtgggatttgcgcactggacgttgtatcatgtttctggaaggc
cacctgaaggagatctatggacttaacttctccccaaatggataccacgttgcaactggc
agtggtgacaatacttgcaaggtatgggacctccgccagaggaagtgcatctacaccatt
cctgcccatcagaacctggtgactggggtgaaatttgaacccaatcatggtaacttcctg
ctgacaggcgcttatgataacaccgcaaagatctggactcaccctggctggtcccctctg
aaaacactggctggtcatgagggaaaggtgatgggactggatatctccctcgatggccag
ctgatagcaacatgctcctatgacagaaccttcaagttgtggacagcagagtag
DBGET
integrated database retrieval system
