Gallus gallus (chicken): 417348
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Entry
417348 CDS
T01006
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X7
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
417348 (TNRC6C)
03036 Chromosome and associated proteins [BR:
gga03036
]
417348 (TNRC6C)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
417348 (TNRC6C)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Gene silencing
piRNA pathway
417348 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
417348
NCBI-ProteinID:
XP_004946161
CGNC:
1210
Ensembl:
ENSGALG00000001725
LinkDB
All DBs
Position
18:3972442..4061298
Genome browser
AA seq
1806 aa
AA seq
DB search
MVGRLLAPDLSHSGLGDHYENSHWGQQPTFRSEGNCSWDKVIIDRTDKEAWPSITGAETE
SASECTTDTDSASNCGSENSSMATGSAQGNFTGHTKKTNGNNGANGALVQSTSNQSALGA
GGANGNGSSARVWGMAAGSGSGLAHCSASGGDGKMDNMIGDGRSQNCWGASNSNAGINLN
LNPNANPAAWPVLGHEGTVGAGNPSSICSPVSAIGQNMGNQNGNPTGTLGAWGNLLPQES
TEPQTSTSQNVSFSVQPQNLNTDGPNNTNPMNSSPNPINAMQTNGLPNWGMAVGMGAIIP
PHLQGLPGANGTSVSQVSGGSGEGMGGSVWGMSPGNPATGNSNSGFSQGNGDTVNSALSA
KQNGSSSAVQKEGNGASAWDSGPPSGPGVLAWGRGGGNGGVGSMHSGAWGHPNRNASNGV
NGEWVKPPNQHSNSDINGKGSAGWDSSSVTSPNPAMQQGNEQMNSWAKAAASGTTASEGS
NDSGGSQNEGSSGREGAAEGRRRDKGMIDQGQVQLPRNDLDPRVLSNTGWGQTPVKQNTA
WEFEESPRSERKNDNGTEAWGCAATQSSNSGGKNDGSIMNSTNTSSVSGWVNSPPAAVPT
NTGWGDNNNKAPNGPGGWGESASSTTVNNAAAAKSGHTWSGTANQEDKSPTWGEPQKPKS
QNWGDGQKSNPSWTSGGGDWTDSSSVPGHLGDGKKNGSGWDSDNRSGSGWNDSTRSGTSG
WGNGTNSKANTGTSWGESLKPGPQQNWANKPQDNSVSNWGGAASVKQTGSGWVGGPVPAK
QKENCEATGWEEPSPPSIRRKMEIDDGTSAWGDPNYNNNKTVNMWDRNNPIIQSSTTTNT
TTTSTIINTNMVEPQPSHQSSAQPNRSPLLGPAGWGEMPNVHTKSEASWGEPSSPSAAVD
NGTSAWGKPPSSGTGWGESPAEPAGTYGRTAAPTAAPALCKPASKSMQEGWGSGGDEVNL
STSQWEDEEGDMWNNTASQESSSSCNSWGNAPKKGLQKGMKTSSKQDEAWIMNRLIKQLT
DMGFPREPAEEALKSNNMNLDQAMSALLEKKVEMDKRGMGVTDYNGMVTKPLGCRPPPIS
KESSMDRPTFLDKLTLSFSNQDGGLVEEPTTSPFLPSPSLKLPLSNSALPNQTLGGIASG
LGMQNLNSSRQIPSGNLGMFGNSGAAQARTMQQPQQPPVQPLNSSQPSLRAQVPQFLSPQ
VQAQLLQFAAKNIGLNPALLTSPINPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSG
PMRQQEQQVARTINNMQQQIQQHQRQLAQALLMKQQPPPPHLSLHPSAGKSAMDSFSPHP
QAPGLPDLQTKEQQSSPNTFAPYPLAGLNPNMNVNNMDITGGLSVKDTSQSQSRLPQWTH
PNSMDNLSSAASSLDQNSSKHGAIPGGLSIGPPGKSSIDDSYGRYDLIQNSESPASPPVA
VPHSWSRAKTDSDKISNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINT
TIQDVNRYLLKSGGSSPTSSQNATLPSSSAWPLSASGYSSSFSSIASAPSIAGKLSDIKS
TWSSGPISHTQASLSHELWKVPRNTTAPTRPPPGLTNTKPSSTWGASPLGWTSSYSSGSA
WSTDSSGRTSSWLVLRNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVVRYSSKEEAA
KAQKSLHMCVLGNTTILAEFAGEEEVNRFLAQGQPLPPTSSWQSNAGSTQPRLGSAGSHG
LVRGDTGHWNSPCLGGKGSSELLWGGVPQYSSSLWGPPSADDGRVIGSPTPLNTLLPGDL
LSGESI
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atggttgggcggctccttgctccagatctcagtcacagtggattgggagaccattatgaa
aattcccactggggacagcagcccactttcaggagtgaaggcaactgcagctgggataaa
gtgataatagacaggactgacaaggaagcgtggccttccatcacaggagctgagactgaa
tctgcctcagaatgtactacagacactgactctgcctccaactgtggctcagagaacagt
agcatggctacagggagtgcccaaggcaacttcactggacatacaaagaaaactaatggc
aataatggcgccaacggagcactcgtccaaagcacttctaaccagagtgcccttggagct
ggtggagccaacggtaacggcagctcggccagagtgtggggcatggctgcaggctctggc
tctggcctagctcactgctctgccagcggtggggatggcaagatggacaacatgattgga
gatggtagaagtcaaaactgctggggtgcttccaactcaaatgctggcattaatcttaac
cttaaccctaatgccaatccagctgcctggcctgtacttggacatgagggaactgtggga
gcaggcaacccttccagtatttgcagtccggtcagtgccataggtcagaacatgggcaac
cagaatgggaacccgacaggcactttaggtgcttggggaaacttgctgccgcaagagagc
acagaaccacaaacgtccacttctcagaatgtgtctttcagcgtacaacctcagaacctt
aacactgatggaccaaataacactaaccccatgaactcttcaccaaaccctatcaatgca
atgcagacaaatggactgccgaactgggggatggctgttggtatgggggccatcatcccg
ccccacctgcaaggccttcctggtgctaatggaacatcagtttctcaagtcagtgggggc
agtggtgaaggaatgggcggttcagtttgggggatgtccccaggtaatcctgccacagga
aacagcaattctgggttcagtcaggggaatggagacactgtgaactcagcattaagtgct
aaacaaaacggatccagcagtgctgtgcaaaaggaaggaaatggagcgagcgcgtgggat
tcggggcctccgtctggccctggggtgctggcgtggggcaggggcggtggcaacggcggt
gttggtagcatgcattctggagcttggggccaccccaaccgtaacgccagtaacggtgtc
aatggcgaatgggtcaagcccccgaaccagcattccaatagcgacatcaatgggaaagga
tcagcggggtgggatagctctagtgttaccagcccgaatcctgccatgcagcagggcaac
gaacaaatgaactcttgggccaaagctgcagcgtctggcaccacagctagcgaaggaagc
aatgacagcggtggaagtcaaaatgaaggcagtagtgggagggaaggggctgcggaaggc
aggaggagagacaaagggatgatagaccaagggcaagttcagttgccaagaaatgacctt
gaccccagggtcctgtccaatacagggtggggacagacccctgtaaagcaaaacactgcc
tgggaatttgaagagtccccgaggtccgaacgaaagaatgacaatggaacggaggcctgg
ggttgtgcagctactcaatcttcaaactcaggggggaagaacgatgggtccatcatgaac
agtacaaatacctcttcagtatctgggtgggtcaactctccacctgcagctgttccaaca
aatacaggttggggagacaataacaacaaagcaccaaatggcccaggggggtggggagag
tcagcaagctctactactgttaataatgctgctgctgccaaaagcggccacacttggagt
gggaccgcaaatcaggaggacaaatcacctacctggggtgaacctcagaaacccaaatct
caaaactggggagacggacagaaatcaaatccaagctggacttcgggaggtggagattgg
acagattcatcgtctgttcctggacacttgggtgatgggaagaagaatggatctggatgg
gattctgacaataggtcagggtctggatggaatgattccacgaggtctgggaccagtggg
tggggaaatggcacaaacagcaaggctaatacaggtacaagttggggggaatctttaaag
ccaggcccccaacaaaactgggctaataaaccccaggacaacagtgtgagtaactgggga
ggagctgcttctgtaaaacagacgggctcggggtgggttggtgggccagtgccagccaaa
caaaaagagaactgtgaggcaactggctgggaagagccatctccaccgtccattcgccgc
aagatggagatcgatgatggtacctcagcttggggcgacccaaattacaacaacaacaag
actgtaaacatgtgggatagaaataatcctatcatccagagcagtaccacaaccaatacc
accaccactagcaccattatcaacaccaacatggttgaacctcagccatcgcaccagtca
agtgcccagccgaaccggtccccgctgcttggtccagcaggctggggagaaatgcctaac
gtccacacgaagagcgaagcttcttggggagagccgtcctccccttctgctgcggtcgat
aacggcacgtcggcgtgggggaaaccccccagcagtgggacggggtggggagagagccct
gccgagccggcggggacctacggcagaacggccgctccaactgctgccccagcactgtgc
aaaccagcttcaaaatctatgcaagaaggctggggcagtggtggggatgaagtgaatctc
agtactagtcagtgggaagatgaagaaggagatatgtggaataatactgcttcacaagaa
agcagctcctcctgtaattcctgggggaacgccccaaagaaaggacttcagaagggcatg
aagacatctagcaagcaagatgaggcctggatcatgaaccgcctgataaaacagctcaca
gatatgggcttccctagagaaccagcggaagaggccttgaagagcaacaatatgaatctc
gatcaggccatgagtgctctgctggaaaagaaggtggaaatggacaagcgtggaatggga
gtgaccgactataatggaatggtcaccaaaccccttggctgccgcccaccaccaatctcc
aaagagtcttccatggaccgccccaccttccttgacaagctcaccctttctttctccaat
caggatggcggcctagtggaagagcccactacttcaccatttttgccttcaccaagcctg
aagctccccctttcaaacagtgcactccctaatcagaccctgggcgggattgcctcaggg
ctgggcatgcaaaacttgaattcttctcgacagataccgagtggcaatctgggtatgttt
ggcaatagcggagcagcacaagccaggaccatgcaacagccgcagcaaccgccagtgcaa
cctcttaattcatcccagcctagtcttcgtgctcaagtgcctcagtttctatcccctcag
gttcaagcacagcttttgcagtttgcagcaaaaaacattggtctcaaccctgcactatta
acctcgccaattaatcctcagcatatgacgatgttgaaccagctctatcagctgcagctg
gcgtaccaacgtttacaaatccagcagcagatgttacaggctcagcgtaatgtttccgga
cccatgagacaacaggagcagcaagttgcacgtacaatcaataacatgcagcagcagatc
cagcagcaccagcgccagctggcccaggccctgcttatgaagcagcagcctccccctcca
catctatctttgcacccctctgcaggcaaatcagccatggatagcttttcaccccatccc
caggctcccggccttcctgacctgcagaccaaagagcaacagtcttcaccgaacaccttt
gctccttaccctcttgctggactgaacccgaacatgaatgtaaataacatggacattact
ggtggtttgtcagtgaaggacacttctcagtcccagtctcgccttcctcagtggacacac
cccaactcaatggataatctgtctagtgctgcttcttctcttgaccagaactccagcaag
cacggtgctatacctggaggtttaagtattggtcctccgggaaagtcctccattgatgac
tcttacggccggtatgatctgattcagaacagtgagtcgcccgccagcccacccgtagct
gttcctcacagctggtcacgtgccaaaaccgatagtgataagatctccaacggctccagc
ataaactggccaccagaatttcatccaggagtgccatggaaaggactacagaatattgat
cctgaaaatgaccctgatgttactcctggaagtgttccaaccgggcccaccataaacacc
acgatacaggatgttaatcgctatctcctcaagagtggagggtcatccccaacatcatct
cagaatgccacgctgccttcatcgagtgcctggccgcttagtgcctccggctacagtagc
tctttcagcagcattgcatccgcacctagcattgcaggtaaactgtcagacatcaagtct
acgtggtcctccggcccaatctcccacacacaagcctctctgtcccatgaactatggaag
gtacccagaaacactacggctcctaccagaccacctccgggcttaaccaacaccaagcca
tcatcgacgtggggtgccagtcccctgggctggaccagctcttactcctctggttctgca
tggagtactgacagctcagggaggacgagcagctggctggttcttcgcaacctcacgccc
cagattgatggctccacactgcggacgttgtgtttgcagcatggccctctaataacattc
cacctgaacctgacacaagggaatgctgtggtccgatacagttccaaggaagaagcagcc
aaggcccaaaagtctctgcatatgtgtgtcctgggaaacactaccatcctggctgagttc
gccggcgaggaggaggtgaaccgcttcctagcgcagggccagccgctgccgcccacctcc
agctggcagtccaacgccggcagcacgcagccacgcctgggctcggccggctcccacggg
ctggtgaggggcgacacggggcactggaacagcccctgcctggggggcaagggcagcagc
gagctgctgtggggcggcgtgccccagtactccagcagcctctggggaccccccagcgcc
gacgacggccgagtgatcgggagccccacgcctctgaatactcttcttccgggggatctt
ctcagcggggagtccatctag
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integrated database retrieval system
