Gallus gallus (chicken): 417461
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Entry
417461 CDS
T01006
Symbol
TRIM50
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gga04121
]
417461 (TRIM50)
Ubiquitin system [BR:
gga04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
417461 (TRIM50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
PRY
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
TRIM_CC
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
zf-Nse
zf-RING_4
Sina_RING
U-box
ATG17_like
Vps53_N
DUF7615
Dynactin_p22
Rotamase
Motif
Other DBs
NCBI-GeneID:
417461
NCBI-ProteinID:
XP_015151390
CGNC:
50515
Ensembl:
ENSGALG00000021696
UniProt:
A0A8V1AML5
LinkDB
All DBs
Position
19:832515..838161
Genome browser
AA seq
492 aa
AA seq
DB search
MARKMSIDNLEDQLLCPICLEVFKEPLMLQCGHSYCKSCVLSLSGELDEQLLCPVCRKSV
DCSASPPNVTLARIIEALQSRGETEPTPESCPTHDNPLSLFCEADREVICGLCGTIGNHK
QHKITPISTAYCRMKEELSVLLTDVHRCKRNLDELFSKLINNKIRIANEADVFKWVIRKE
FEELHRYIDEEKATFLESVEGKAAQLITSIESQVKQTSDTLQRLKEMQSILETLGNESQL
DFIRKYSSYQFRSELPSLHPGDTIFSPVSFKPCFHQDDIKMTVWKRLHRHVLPAPEMLKL
DPVTAHPLLELFKGDTVVQCGLYQRRDSNPKRFDSSNCILTCKGFSCGQHYWEVIVGTRN
HWRVGIIKGTVSRKGKLSKSPENGVWLIGLKEGKVYEAFSTPRATLPLTARPQRIGIYLH
YEKGELTFYNADSPDELSPIYTFQAEFQGQLYPIVDLCWPERGPFSPPIILPAPAAGRHS
QGPPAAEEPTKL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaagatgagcattgacaatctggaggaccagctgctctgccccatctgcttg
gaggtcttcaaggagcccctgatgctgcagtgtgggcattcctactgcaagtcctgtgta
ctgtcactgtctggagagctggatgagcagttactgtgccctgtgtgccgtaaatctgtg
gactgcagtgcttcaccacccaacgtcacgctggcccgtatcattgaggcactgcagagc
cggggcgagacagagcccaccccagaatcctgcccaacgcacgacaatccactgagcctc
ttctgcgaggctgaccgagaggtgatctgtgggctgtgcggcacaattggcaaccacaag
cagcacaagatcacccctatttctaccgcatactgccggatgaaggaggagctgtctgtg
ctgctaaccgatgtccaccggtgcaagaggaacctggatgaactgttcagcaagctcatc
aacaacaaaatccgcattgcgaatgaggcagatgtcttcaagtgggtgatccggaaggag
tttgaggagctgcacaggtacatcgatgaggagaaggccaccttcctggagagcgtggag
gggaaggcagcccagctcatcacctccattgagtctcaggtcaagcagacatcagacacc
ctgcagaggctgaaggagatgcagagcattctggagacactcggcaacgaaagtcagctt
gatttcatccgtaaatacagctcctaccagttcaggtcagagcttcctagcctacaccca
ggtgataccatcttcagtcccgtatccttcaagccttgtttccaccaagatgacatcaag
atgactgtgtggaagcggctgcaccgccacgtcctgccagctccagagatgctgaaactg
gacccggtgacagcacatcccctgctggaactcttcaagggtgacacggtggtgcagtgc
gggctgtaccagcgccgggacagcaaccccaagcgttttgactccagcaactgcatcctc
acctgcaagggcttctcctgcggccagcactactgggaggtgatcgtgggcaccaggaac
cactggcgcgtgggcatcatcaagggcacagtcagccgcaaagggaagctcagcaagtct
cccgagaacggcgtgtggctcatcggcctcaaggaagggaaagtctatgaggccttcagc
accccacgggccacgctgccgctgaccgcccggccgcagcgcatcgggatctacctgcac
tacgagaagggcgagctgaccttttacaacgccgacagccccgacgagctcagccccatc
tacaccttccaggcggagttccagggccagctctaccccatcgtggacctgtgctggccg
gagcgagggcccttctcccctcccatcatcctgcccgcgcccgctgccggccggcactcc
caggggccccccgcggcggaggagcccaccaagctgtag
DBGET
integrated database retrieval system
