Gallus gallus (chicken): 417559
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Entry
417559 CDS
T01006
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
gga
Gallus gallus (chicken)
Pathway
gga03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
417559 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gga03041
]
417559 (PRPF8)
Spliceosome [BR:
gga03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
417559 (PRPF8)
Complex C
U5 SnRNP specific factors
417559 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
417559
NCBI-ProteinID:
XP_415805
CGNC:
2126
Ensembl:
ENSGALG00000002943
UniProt:
E1BZT5
LinkDB
All DBs
Position
19:complement(5829850..5847858)
Genome browser
AA seq
2335 aa
AA seq
DB search
MAAVFPYRGGCAPVPTPMAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgtcttcccgtaccgcggcggctgcgcgccggtgccgaccccgatggcgccg
ctgcccgactatatgtctgaggagaagctgcaggagaaagcccgcaagtggcaacagctg
caggccaagcgctatgcggagaagaggaaattcggcttcgtggacgcgcagaaggaggac
atgccccctgagcacgtccggaaaatcatccgcgaccacggtgacatgaccaacaggaag
ttccgccacgataagcgcgtctacctgggtgctttgaagtacatgcctcatgccgttctg
aagctcttggagaacatgcctatgccttgggaacaaatcagagatgttccagtcctgtat
cacatcacgggagccatctcttttgtgaatgagattccctgggttatagagccagtgtac
attgcacagtgggggtccatgtggattatgatgaggcgagagaagagggacagacgtcac
ttcaagaggatgagattccccccatttgatgatgaagaaccccctctggattatgctgat
aacattctagatgtggaacccctggaagcgattcagcttgagctggatccggaggaagat
gccccagtgctggactggttctacgaccaccagcctctgaaagacaacagaaaatacgtg
aatggttctacctaccagcgctggcagttcactctgcctatgatgtccacgctgtatcgg
ctggccaatcagctgctcactgaccttgtggatgacaactatttctatttgtttgatctg
aaagcgttcttcacctccaaggccctgaacatggctattcctggaggtcccaagtttgag
cctcttgttagagacatcaatttgcaggatgaagactggaatgagtttaacgacatcaac
aaaattatcatcaggcagccaatcaggacagagtacaaaattgctttcccatacctgtac
aataacctcccccaccacgtccacctgacctggtatcatactccaaacgttgttttcatt
aaaacagaagatcctgatctcccagctttttatttcgatccactgatcaaccccatttca
cacagacattctgttaagagtcaggaaccgctacctgatgatgatgaagagtttgagtta
ccagagtttgtggaacctttcttgaaggataccccactctacacagacaacacagccaat
ggcattgccttgctgtgggccccacggccattcaatctgaggtctgggaggactcggaga
gctcttgacatcccactggtcaagaactggtatcgtgagcactgcccagctggccagcca
gtgaaagtgcgagtctcctatcagaagctgctgaaatactatgttctaaatgccctcaag
cacagaccccctaaggcccagaagaagaggtacctattccgctccttcaaggctacaaag
tttttccagtcaacaaagctggactgggtggaagtaggcctgcaggtgtgtcgccagggc
tacaatatgctgaacttgctgatccacagaaagaacctgaactaccttcacttggattac
aactttaacctgaagccagtaaagaccctcaccactaaggaaaggaaaaaatcccgtttt
ggtaatgctttccatctgtgccgagaggttctgcggctgactaaattggtggtggacagc
cacgtccagtacagacttggaaatgtagatgcatttcagttggcagatggcttgcagtac
atctttgcccatgtcggtcagctgacagggatgtacagatacaagtacaaactgatgagg
cagattcgtatgtgcaaggacctgaaacatctcatctactacaggtttaacacaggacct
gtgggcaaaggtcctggctgtggcttctgggctccaggctggagagtgtggctgttcttc
atgaggggcatcacgccactgctggaacgctggctggggaatctgctggccaggcagttt
gaaggccgtcactcgaagggtgtagcaaagactgtcacaaagcagcgtgtggagtctcac
tttgacctggagctgagggcagctgtaatgcatgacattctggacatgatgccagaaggg
atcaaacagaacaaagccagaaccatcctgcagcatcttagtgaggcttggcggtgctgg
aaggccaatatcccctggaaggttcctgggctgccaactcctattgagaacatgatcctg
aggtatgtgaaggcaaaagctgattggtggacaaatacagctcactacaacagagagcgt
atccgtcggggtgccactgtggacaagactgtctgtaagaagaatctgggccggctgacc
agactctacttaaaagctgagcaggagcggcagcataattacttgaaggatgggccttac
atcaccgcagaagaggctgttgctgtgtacacaaccacagtgcactggctggaaagcagg
aggttctcacccattccattccccccattgtcctacaagcacgataccaagttgctcata
ctggccctggagaggctgaaggaagcttacagtgtgaaatctcgcctgaatcagtcacag
agggaggagctgggcttgattgaacaggcttatgataatcctcatgaagctctgtccaga
atcaaacgacaccttttaactcagagagcgttcaaggaggttggcattgagttcatggat
ctctacagccacctggttcctgtttatgatgttgagcccttggagaaaatcacagatgct
tatctggatcagtacttgtggtatgaggctgataaaagaagactcttccctccttggatc
aagcctgctgacactgaacctcctccactgttagtgtacaagtggtgccaaggcattaat
aatctgcaagacgtttgggaaacaagtgaaggtgaatgcaatgtgatgctggaatctcga
tttgagaagatgtatgagaagattgacctgacgttactcaacaggctgttgcgtcttatt
gttgatcacaacattgctgactacatgacagccaaaaacaacgtggtgatcaactacaag
gacatgaatcacacaaactcctacgggattattcgtggtctgcagtttgcttccttcatc
gtccagtattatgggcttgtgatggacctgctggtgctgggtctgcaccgtgccagtgaa
atggctgggcctccccagatgccaaatgacttcctcagcttccaagacattgcaactgag
gtggcccatcccattcgccttttctgcagatacatcgatcgcattcacatcttcttcagg
tttacagcagatgaggcaagggacttgattcaacggtacctgacagagcatccagatccc
aacaacgagaacattgtaggctacaacaataagaagtgctggcctcgggatgctcggatg
cgcctcatgaagcatgatgtcaaccttggccgtgctgtattctgggatatcaagaaccgc
ctgcctcgatccgtcaccacggtgcagtgggagaacagcttcgtgtctgtttacagcaag
gataaccccaatttgctgtttaacatgtgtggttttgagtgccgcattctgcccaaatgc
cgcaccagctatgaggagttcacccacaaggatggtgtctggaacctgcagaatgaggtc
accaaggaacgcacagctcagtgcttcctgcgtgttgatgatgagtctatgcagagattt
cacaacagagtgaggcagatcctcatggcgtctggctctacaaccttcactaagattgtc
aataaatggaatacagctctgattggcctgatgacatatttccgggaagctgttgtaaat
actcaggagctgcttgacttgctggtgaagtgtgagaataaaatccagactcgaatcaaa
attggtctgaattccaaaatgcctagccgttttccacctgtggtgttctacacccctaaa
gagctgggaggtctggggatgctctccatgggacacgttctcatcccacagtctgacctg
aggtggtccaagcagaccgatgttggcattactcatttccgctcagggatgagtcacgag
gaggaccagctcatcccaaatctgtatcgttacatccagccgtgggagagtgaattcatt
gactctcagagagtgtgggcagaatatgctctcaaacgacaagaggctatagcccagaac
aggcgtctgacgctggaagatctggaggactcgtgggacagaggaattcctcgtattaac
acccttttccagaaggaccggcataccctggcttatgataaaggatggagagtcaggact
gacttcaagcagtatcaggtcctgaaacagaacccattctggtggacacatcagcgccac
gatgggaagctgtggaacctgaacaactaccgcactgatatgatccaagcactgggtgga
gtggaggggatcctggagcacactctcttcaagggcacttacttccctacatgggagggt
ctcttctgggagaaggccagtggctttgaggagtccatgaagtggaagaagctgacaaat
gcccagagatcgggtttgaatcagattccaaacagaagatttactttgtggtggtctcct
accattaacagagccaacgtatatgttggctttcaggtgcagctggatttgacaggtata
tttatgcatggcaagatccccacgctgaagatttctctcattcagattttccgagctcac
ttgtggcaaaagatccacgagagcattgtaatggatttgtgtcaggtgtttgatcaggag
ctggatgctctagagattgaaacagtgcagaaggagacaatccatcccaggaaatcgtac
aagatgaattcttcatgtgcagatatccttctctttgcttcctacaagtggaatgtgtca
cgtccatcattgcttgcagattccaaagatgtgatggacagcaccaccactcagaagtac
tggatagatatccagctgcgctggggagattatgattcccatgacattgaacgctatgca
agagccaagttcctggactacactacagacaacatgagtatctatccatctcccactggt
gtgctcattgccatcgatctggcctataatttacacagtgcatatgggaactggttccct
ggtagcaaacctctgatccagcaggctatggccaaaatcatgaaagcaaatcctgcgctg
tatgtgctgagagaacgaatccgtaagggcttgcagctgtactcatctgagcccacagaa
ccctacctttcctctcagaactatggagagctcttctccaaccagatcatctggtttgtg
gatgacaccaatgtgtacagagtgaccattcataagacttttgaagggaatttgaccaca
aaacctatcaatggagccattttcatcttcaaccctaggactggtcagctcttcctgaag
atcatccacacatctgtgtgggcaggacaaaagcgtctcggacagctggccaagtggaag
actgctgaagaagtggctgccttgatccgctcacttcctgtggaggagcagcctaagcag
atcatagtgactcgaaagggcatgctggacccacttgaggtgcacttgctggatttcccc
aatattgtgatcaaaggctccgagttgcagctgcctttccaggcctgtctgaaagtggag
aagtttggtgatctcattctgaaggctactgaacctcagatggttctcttcaatctctac
gatgactggctgaaaaccatctcttcctacacggcattctcacgtctgattctgattctc
cgggcactgcatgtgaataatgatagagccaaagttattctgaaaccagacaagacgacc
ataacagagcctcaccacatctggccaaccctgacagatgaggaatggatcaaggtggag
gtgcagctgaaagatctgatccttgctgactatggcaagaagaacaatgtgaatgttgca
tccctgacacaatcagagatccgagacattatcctgggcatggagatctctgctccctct
cagcagagacagcagattgcagaaattgagaagcaaaccaaggagcagtcgcagctgaca
gccacacagacccgcactgttaacaaacatggagatgaaatcatcacctccacaaccagc
aactatgaaacccagactttctcctccaagactgagtggcgagtcagagccatttctgct
gccaacctccacctgagaacaaaccacatttatgtttcatcagatgacataaaggaaacg
ggctatacgtacattcttcccaagaatgtgttgaagaaattcatctgcatctcagatctg
cgagcccagattgcaggttacctgtatggagtgagccctcctgataatccccaagtgaag
gagatccggtgcattgtgatggtaccccagtggggaacacaccagactgtgcatctccca
gggcagctgcctcagcatgagtacctcaaggaaatggaacctctggggtggattcatacc
caaccaaatgagtccccgcagctgtcaccacaggatgtcaccacccatgccaaagtcatg
gctgacaacccctcctgggatggggagaaaactatcatcatcacctgcagttttacacca
ggttcctgcacgctgacagcctacaaactgaccccaagtggctacgagtggggcaggcag
aacacggacaaagggaacaaccccaagggctacctgccatcccattatgagagggtgcag
atgctgctgtcagatcgcttccttggcttcttcatggttccagcacagggatcctggaac
tacaacttcatgggtgttcgccacgaccccaacatgaaatacgagctgcagctcgccaac
cccaaggagttttaccacgaggtccatcgcccttctcacttcctcaacttcgccctgctg
caggagggggaggtttactccgccgacagggaggacctctacgcctaa
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integrated database retrieval system
