Gallus gallus (chicken): 417598
Help
Entry
417598 CDS
T01006
Symbol
NCOR1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X2
KO
K04650
nuclear receptor co-repressor 1
Organism
gga
Gallus gallus (chicken)
Pathway
gga04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
417598 (NCOR1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gga01009
]
417598 (NCOR1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gga03036
]
417598 (NCOR1)
Protein phosphatases and associated proteins [BR:
gga01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
417598 (NCOR1)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
417598 (NCOR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
417598
NCBI-ProteinID:
XP_004946712
CGNC:
3303
Ensembl:
ENSGALG00000004477
LinkDB
All DBs
Position
19:complement(6611731..6668011)
Genome browser
AA seq
2528 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQSRYPTHSVQYTFPSTRHQQEFAVPDYRSSHLEVSQATQLLQQQ
QQQQQQLRRRPSLLSEFHPGSDRPQERRTGYEQQFHPGPSQTDHDSLESKRPRLEQVSDS
HFQRVSAATVLPLVHPLQEGLRSADIKKDPGFGGKHEGPSSPISGQPCGEDQNASPSKLS
KEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPERPVSPPPVEQKHRSIVQ
IIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRN
HARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQE
RFQRVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVKF
INMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERKNVPDCVLY
YYLTKKNENYKALVRRNYGKRRGRNQQQIARPSQEEKVEEKVEEEKAEKADKKDEEKKDE
EEKDEKEESKENTKEKDKTEVATEETEEREQATPRGRKTANSQGRRKGRITRSMTNEAAQ
ANAAAAAATEEPPPPLPPPPEPSSTEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVG
TKSEAQCKNFYFNYKRRHNLDSLLQQHKQKSSRRPREERDVSQCESVASTVSAQEDEDIE
ASNEEENPEDSEGAENSSDTESAPSPTPAETAKPTEETPSESAASKMTTEAAAEQESTVK
PAASTSPSLTSQGVSTAESQTSEPQVKEEINTEAEEPMEVDSRSHPVEAKPVLNLPVHTK
VEPVETEMRLPENIQVKIESDTKEREMEKPKEKSEPEEMDYSLSQQVNSARQESHSDNDS
SATCSADEEVDGEPDRQGIFRESKPSLLNPAGSILVSPTIKQGQMDLQQLHHRAAVIPPM
VSCSPCTVPVGTPVSGYALYQRHIKAMHESALLEEQRQRQEQLDMEYRSSVSPCGTSKSP
NVEWEGKPVAYMPYAEVKRAIEQEAQVQTTATRSASPYRLSPREVNKASPQPDMNAARYS
VPPVLQPAPHQVITNIPEGVRLPTTRPTRPPPPLIPSSKTSVPSEKPSFIMGGSISQGTP
GTYLTSHSQASYTQETAKPSVGSISLGLPRQQESAKSASLPYIKQEEFSPRSQNSQPEGL
LVRAQHEGVVRGTTTIQEGSITRGTPTNKVSVETIPSLRGSITQGTPALSQSGIAADALL
KGTITRLATEDSSPEKCREEASAKGHVIYEGKSGHILSYDAIKNVREGTRSPRTAHEISL
KRSYDTMEGNIKQGMSMRESPVSAPLEGLICRALPRGSPHAELKERTVLSGSIMQGTPRA
TSESFEEGLKYPKQIKRESPPIRAFEGAITKGKPYDGVTTIKEMGRSIHEIPRQDLLSQE
SRKTPEIVQTARPIIEGSISQGTPIKYESNSGQSAIKHNVKSLITGPSKLPRGMPQLEMV
PENVKVVERGKYEDVKTGDAVRSRHTSVVSSGPSVLRSTLHETPKSQLSPGIYDDTNARR
TPVNYQSPMSRSSPMMNRVSEAGISSGKSANHERKNTLTPTQRESVPAKSPVPGVDPVVA
HSPFDPHHRGATPEVYRSHLPPHLDPAMPFHRALDPAAAAYLFQRQLSPTPGYPSQYQLY
AMENTRQTILNDYITSQQMQVNLRPDVTRGLSPREQTLALPYAGARGIIDLNNMAPTILV
PHPGGTSTPPMERITYIPGTQLTFPPRPYNPASLSPGHPTHLAASAAANAEREREREREK
ERERERERERERERERERERERITSVPAELYLRPGAEQPGRPGSHGYVRSPSPSVRSQEN
ILQQRPSIFQGTNGTSVITPLDPAAQLRIMQLTPGAPSITQGLPASRYNTAADALAALVD
AAASAPQMEVAKGKDTKHEGTRIEENVGRRSAVVTEQQQMEQKTLEVEKRAVQCPYTSAN
FSGGKSQGQSSTVVYSEAGKEKGPPPKSRYEEELRTRGKTTITAANFIDVIITRQIASDK
DARDRGSQSSDSSSSSPGDAIEVISPANSPIPTQEKLQPYQQETPKPSQAESDPNRQYEG
PIHRYRAQQEPPPSPQQPPPPSSQAEGMAHVPRTHRLITLADHICQIITQDFARNQAASQ
ASLQPPTTTFQNSTPAPTPVSTRAKTSNRYSPEAQSQPVHHQRPGARVSPENLSDKSRGR
PGKSPERSHVSSEPYEPISPPQVPVVHEKQENVLLLSQRAEPTEQRTDSRSPGSISYLPS
FFTKLENTSPMVKSKKQEIFRKLNSSGGGDSDMATAQPGTEIFNLPAVTTSGAVSSRGHS
FADPASNLGLEDIIRKALMGNFDDKSEDHGVVMSQSIAVAPGNSSAVVSASNETRREEAN
PSPNSGGAVSKQKLIGKSNSRKSKSPIPGQGYLGTERPSSVSSVHSEGDYHRQTPVWAWE
DRPSSTGSTQFPYNPLTMRMLSSTPPTSIACAPPSMSQATTHQQNRIWEREPAPLLSAQY
ETLSDSDD
NT seq
7587 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcaggctaccctcctaaccaaggagcattcagcacagaacagagtcgttac
cctacccactctgtccagtacaccttccctagcacccgacaccagcaggaatttgcagtt
cccgattatcgttcgtctcacctggaagtcagtcaggcaacccaactcttgcagcagcag
cagcaacagcagcagcagcttcggcgccggccttctttgctttcagaatttcacccaggc
tctgacaggcctcaggaaaggagaactggatatgaacagcagtttcatccaggtccatct
cagacagatcatgattcactggaatctaagcgaccacgtcttgaacaagtttctgattcc
cattttcagcgtgtcagtgctgctactgtcttgcctttagtacatcctctgcaggaaggg
ttgagatctgcagatattaagaaggacccaggttttggaggaaagcatgagggaccatct
tctccaatttctggtcaaccgtgtggggaggaccagaatgcttcaccttcaaagctgtca
aaggaagaactgatacagagcatggaccgcgtggatcgtgaaattgcaaaggttgaacag
caaatccttaaactgaagaaaaagcaacaacaactcgaagaagaagctgctaaaccacca
gagccagagaggcctgtctcccctcctccagtggaacagaagcaccgcagtattgtccaa
attatttatgatgaaaatcggaaaaaagcagaagaagctcacaagatttttgaaggtctt
ggtcccaaagttgaactgccgctttacaaccaaccatcagacacaaaggtctaccacgaa
aacatcaaaacaaaccaggtgatgaggaaaaagctaatactattttttaaaagaagaaat
catgcaagaaagcaacgggaacagaaaatctgccaacgttacgatcagctgatggaagca
tgggagaaaaaggttgacaggatagaaaataatccacgcaggaaagctaaggagagcaaa
acaagggaatactatgagaaacaatttccagaaatccggaagcaaagagaacagcaagag
cgatttcagagagttggtcaaagaggtgctggactttcagcaactattgctagaagcgaa
catgagatttctgaaatcattgatgggctttctgagcaggagaataatgaaaaacaaatg
cgtcagctctcagtcattcctcccatgatgtttgatgcagaacagagacgagtgaagttt
attaatatgaatggtctgatggaggatcccatgaaagtttataaagacagacaattcatg
aatgtctggaccgaccacgagaaagagatttttaaagaaaagtttgtccaacatcccaag
aactttggtctaattgcttcctacctggaacgaaagaacgttcctgactgtgtactctat
tattatttgactaagaaaaatgaaaactataaagcccttgtgcgaaggaattatggtaaa
cgcagagggagaaaccagcaacaaattgctcgtccttctcaagaggaaaaagtagaagaa
aaggtagaagaggaaaaagcagaaaaagcagacaaaaaagacgaggaaaagaaagatgag
gaggaaaaggatgagaaggaagaatctaaagagaataccaaagaaaaggacaaaactgaa
gttgccacagaggaaacggaggaaagggagcaggccactcctaggggccgaaaaactgcc
aatagtcaaggtcgtcgtaagggcagaatcaccagatcaatgacaaatgaagctgcacaa
gcaaatgctgctgcagctgcagccactgaagagccaccaccgccgcttccacccccacca
gaaccttcttctacagagcctgtggagacatcccgctggacagaagaagaaatggaagtt
gctaaaaaaggccttgtggaacatggacgcaactgggcagcaattgccaaaatggttggg
acgaaaagtgaagctcagtgtaaaaacttctacttcaactataaaaggagacataacctg
gatagtctccttcaacagcacaaacagaagtcttcacgaaggccccgtgaggagcgagat
gtatcacagtgtgagagtgtagcttcaactgtgtcagctcaggaggatgaagacattgaa
gcatctaatgaagaagagaatccagaagacagtgaaggtgctgaaaatagttctgataca
gaaagtgctccatctccaactccagcagaaactgctaaaccaactgaagaaactccatct
gagagtgctgcttcaaaaatgaccactgaggcagcagcagaacaggaatctactgttaaa
cctgcagccagcacatctccctccttaacatcccaaggtgtatcaacagctgaaagtcag
acctctgagccacaggttaaggaagaaataaatactgaagcagaagaacctatggaggtt
gacagtagaagccatccagttgaagctaagcctgtgcttaatcttccagtacataccaaa
gttgaacctgtagagactgaaatgaggctaccagaaaatattcaagtgaaaatagaaagt
gataccaaagagagagagatggagaaacccaaggaaaagtcagaacctgaagaaatggac
tatagtctgtcacaacaggttaactcagcaagacaagaatcccattcagataatgattca
agtgccacctgtagtgctgatgaggaagttgatggagagcctgacagacaaggtatcttc
agggagtcgaagccctcattgttaaatccagctggatcaatactggtgtcacctacaata
aagcaagggcagatggacctacaacagcttcatcaccgagcagctgtcataccacctatg
gtttcttgcagtccctgtactgttcctgttggaacaccagtgagtggttatgcactctat
caaaggcacattaaagcaatgcatgagtcagcactgctggaagagcagcgccagaggcaa
gaacagctggacatggagtatcgaagctctgtaagcccgtgtggcacttccaaaagccct
aatgttgagtgggaaggaaaaccagtggcctatatgccctacgctgaggtcaagcgagca
atagaacaggaagcacaagtgcaaactacagcaacaaggtcagcatcaccatacaggcta
tctccaagagaagtcaataaagcctctcctcagcctgatatgaatgcagctcgctatagc
gtcccaccagttctccagcctgctcctcaccaagtaataactaatatccctgaaggagtt
cgccttcctacaaccagacctaccagaccaccaccaccactcattccatcctccaaaaca
agtgtgccatcagaaaaaccttctttcattatgggaggctcaatctcacagggaacacct
ggcacttacttaacatctcacagtcaagcttcctatacacaagaaacggcaaagccatca
gtgggttccatatcacttgggctgccaaggcagcaggaatcagccaaatctgcttccctg
ccttatatcaaacaagaagaattttctcccagaagtcagaattcccagcctgagggactc
ctggtcagggcacagcatgaaggtgttgtgcgaggtaccacaaccatacaggagggaagt
ataacacgaggaactccaaccaataaagtttctgttgagaccattccttctttgagaggc
tccataactcagggtacaccagctctgtcccagtctggcatagcagctgatgcattattg
aaggggactattacccggctagctacagaagacagcagcccagaaaagtgccgagaggaa
gcttcagccaaaggccatgttatttatgaaggcaaaagtgggcatattttatcttatgat
gctattaaaaatgttcgtgaaggaacaaggagcccaagaactgctcatgaaattagctta
aaaagaagttacgatacaatggaaggaaatataaagcaaggaatgtcaatgcgggaatct
ccagtatctgcaccactggaaggtttaatatgccgtgcactgcctaggggtagcccacat
gctgaacttaaagaaagaacagtgttgtctggctctataatgcaaggcacaccaagagca
acatctgaaagtttcgaggaaggcttgaaataccctaaacagattaagagagagtcacct
cccataagggcattcgaaggagccatcactaaagggaagccgtatgatggagtcactacc
atcaaagaaatgggccgttccatccatgagatcccaagacaggacctgttaagccaggag
agtcgcaagactcccgaaatcgtgcagacagccaggccaatcatagaaggctccatatct
cagggtacacccataaaatatgaaagcaattctggccagtctgccatcaaacacaatgta
aaatcattaatcactggaccaagcaagctaccccgtggaatgcctcagctggaaatggtg
ccagaaaatgtgaaggtggtggagcgaggaaaatacgaagatgtgaagaccggggatgca
gtacgttcccgtcacacgtcagtagtcagctctggtccctctgttctcaggtcaactctt
catgaaactcctaaatcacaactgagccctgggatttatgatgataccaatgcacggaga
acacctgtgaactatcagagtccaatgtccaggagttcacctatgatgaatagagttagt
gaggctggaatatcttctgggaagtcagcaaatcacgaaaggaaaaacacacttactccc
acacagagagagagcgtgccagcaaaatctccagtcccaggggttgatcctgtagtggct
cacagtccttttgaccctcatcacagaggggctacgcctgaagtctataggagtcacctc
cctcctcacttagatcctgctatgccatttcacagggctctggatcctgctgctgctgct
tacctgttccagaggcagctctcacccaccccaggctacccgagtcagtatcagctttac
gcaatggagaatacacgacagacaatcctaaatgactacattacctcacagcaaatgcaa
gtcaatttacgtcctgatgtaaccagaggattatctcccagagagcaaactttagctctc
ccatatgcaggagcaagaggaattattgacctgaacaatatggctcctactatcttagtg
cctcatcctggaggaacgagcacaccacccatggagagaatcacttacatccctggtact
cagcttacattcccccctaggccttacaatcctgcttctctgtcaccaggacaccctacg
cacctggcagcttctgcagctgcaaatgctgaaagggaacgggaaagagagagggagaag
gagagggaaagggagagggaacgagaacgagagcgggaaagagaacgtgagcgagaaagg
gagagaataacttcagtccctgctgaactttatcttcgaccaggagcagagcagcctggc
agacctggcagtcatggatatgttcggtccccatccccttcagttagaagccaggaaaac
atactgcagcaaagacctagtatttttcaaggaaccaatgggacaagcgtaatcacacct
ttggatcctgctgctcagcttcgtatcatgcagctcactcctggagctccctccataact
caaggtttacctgcttcccgctacaatacggctgctgatgcccttgctgcactagtagat
gctgcagcctctgctcctcagatggaagttgccaaagggaaagacaccaagcacgaagga
accaggatagaggagaacgtgggacgcagatcagctgtggttactgagcagcagcagatg
gaacagaaaacactggaggtagaaaagagggctgtccagtgcccctatacatctgcaaat
ttttctggtggcaaatcccagggacagtcttcaacagtagtctattcagaggctggtaaa
gagaaaggacctcctcctaaatccaggtacgaggaagagctgagaactcgaggaaagacc
acaattactgctgctaacttcatagatgtgatcatcactcgacagattgcttcagacaag
gatgcacgagataggggctctcaaagttcagattcttccagtagttctcctggagatgcc
attgaggtgatcagtcctgcaaattcacctataccaactcaagaaaagctacagccctat
caacaagagacacctaaaccaagccaggcagagagtgacccaaacaggcagtatgagggg
ccgattcaccgttacagggcacaacaggaacctcctccttcaccccagcaacctccacct
ccttcctcccaggcagaagggatggcacacgtgcccaggacccaccgacttatcaccctt
gctgatcacatctgtcaaatcattacacaagactttgctcgaaaccaggcagcttctcag
gcctctttgcagcctcccaccactacattccagaactctacccctgctccaacacctgtt
tctacccgagcaaaaacatctaatcgctacagccctgaggcacagtcacagcctgtccac
catcagcggccaggtgccagagtgtcacctgaaaatctgtctgacaagtcccggggaaga
cctggaaaatctccggagaggagtcatgtttcctcagagccctatgagccaatctcaccc
cctcaggtccccgttgtacatgagaaacaggaaaacgttctattgctttcccaaagagct
gagcctactgaacagaggactgactctcgctctccgggcagtataagctacctgccttcg
tttttcaccaagcttgagaacacttcacccatggtaaagtccaagaaacaagagatattt
cgaaagctgaactcatctggtggaggcgactctgacatggcaactgctcagccagggact
gaaatattcaatttgccagcagtcactacctcaggtgcagtcagttctaggggtcattcc
tttgcagatcctgccagtaatctgggtctagaagacattattaggaaagcattgatggga
aactttgacgacaagagcgaggatcatggagttgtaatgtcacaatccattgcagtagca
cctggcaattccagtgctgtggtatcagcaagcaatgagacacgtagggaagaagccaat
ccatcaccaaattcaggaggggcagtcagcaagcagaagttaattggcaaatcaaacagt
aggaagtcaaagtctccgattcctggacagggatatttaggaaccgaacgaccttcttct
gtctcatctgtacattcagaaggggactaccacagacagactccggtgtgggcctgggaa
gacaggccttcatcaacaggttcaacacagtttccttacaacccattgacaatgcggatg
ctcagcagtacaccgccaacatcgatcgcatgcgccccgccgtccatgagccaagcaacc
actcaccaacagaacaggatatgggagcgagagccagcaccactgctttcagcacaatac
gagactctgtctgacagtgatgactga
DBGET
integrated database retrieval system
