Gallus gallus (chicken): 418243
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Entry
418243 CDS
T01006
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
gga
Gallus gallus (chicken)
Pathway
gga04110
Cell cycle
gga04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
418243 (SMC1B)
04114 Oocyte meiosis
418243 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gga03036
]
418243 (SMC1B)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
418243 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
418243 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
DUF7491
Motif
Other DBs
NCBI-GeneID:
418243
NCBI-ProteinID:
XP_416467
CGNC:
10603
Ensembl:
ENSGALG00000014228
UniProt:
F1NX72
LinkDB
All DBs
Position
1:complement(70357832..70399034)
Genome browser
AA seq
1243 aa
AA seq
DB search
MASAPTATGLGYLKLLMVKDFKSWRGEQLIGPFMRFNCIIGPNGSGKSNIMDAVSFVLCE
KISNLRVKSVRELIHGAHVGKPVSSTASVKIVYCEEDGEEKTFSRVIRDGCSEYIFNDKS
ITRSAYISELEKIGILVKARNCLIFQGTVESIAMKKPKERTQLFEQISNSWQYAEEYERK
KKKMQQAEEDAHFNYNKKKNIAAERKQAKVEKEEAEHYQMLVRELNANRVQLQLFQLYHN
ERSIESLKESLDEKNMEARIKKDSLSTAEDTFRAKKKVLGVLNRDQQQMEREMKTLQASL
IQQKALYIKAKENTSYQIKKVEMSKRSLRDKEKYCDKEKQNIKELEMELHDTEKAWREFE
KEAEEEILLRVERVELRERQLERYKELKEIARRKVATLTQQLGKLRWEQKADEERMKLYQ
RKKKEVKETIVQTVEQIEEYKKRVEKLEEYTKKCTESLEEEKKKEEMLAKEIENSTTRIA
EVNEELNKIVGELQNARIDYHEGKRQQMRAEIVESLKRLYPDSVFGRLLDLCHPIHKKYQ
LAVTKVFSKYMTAIVVATEKTARDCIQFLKQERAEPETFLALDYLEVKPINERLREIKGA
KMIVDVVQTPFAPLKRVIQFVSGNGLVCDTVKEARQIAFEGPVRLKTVALDGTLFLKSGV
ISGGSSDLRVKARCWDDKEINRMKERRDALITELKDLMKIKRKEADLKQLQAQCHGTQTR
LKYSQSELDLIKKKHLPNVYMEKSKLESELVNTESQHDMIKEGVVQRKLKIEEFQKQINE
AEDAVFQEFCEEIGIENIRVYEQEHVRRQEEIDKRRLEFENQKTRLSVQLEYNREHLQKL
TDAVSKLRDTIHKDESEIAGLQKDEEKHLKRVNEIEEEEQHLKDRLSAQKSEIMKTQSEA
DELRKTLLTLNREAAKLQKEAAAIEASLEDKRLRRHNMLLECKVQDLKIRLLFGSLDDIS
EVELGTETEDTQTTGIYEREEAIKIDYSSLPKDLKDLESDKEIEAHLNQMQQEIKSKESI
LMKTAVPNLRAVEKLQIARNKFQESMEAFEASRKEARISKQEFEEVKKRRYELFSQCFEH
ASIVIDQVYKKLCRNSSAQAFLSPENPEEPYLEGIGFNCVAPGKRFMPMDSLSGGEKTVA
ALALIFAVHSFRPAPFFILDEIDAALDNTNIDKVSIFIREQAHKQFQMVVISLKEEFYSK
ADALIGVCPEHDDYMFSRVLTLDLTQYPEDEEAAENHKRTSLE
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcacccactgccacagggctgggctacctgaagctgctgatggtgaaggac
ttcaagtcctggcgtggggagcagcttatcggccccttcatgagattcaactgcataatt
gggcccaatggatcaggaaaatctaacataatggatgctgttagttttgtgctgtgtgaa
aagatatctaatttacgagttaaaagtgttcgagaactaattcacggagcacatgttgga
aaaccagtttcttctacagcaagtgtaaagatagtatactgtgaagaagatggggaagaa
aaaacattttcaagagttatccgtgatggttgttcagaatatattttcaatgataaatct
attacccggtctgcttacatatctgagcttgaaaaaataggcatacttgtcaaagctagg
aattgtcttatttttcagggaacagtagagtcaattgcaatgaagaagccgaaagaaaga
actcaactttttgaacaaatcagtaattcatggcaatatgctgaggaatatgaaaggaaa
aagaaaaaaatgcagcaagcagaggaggatgcacactttaattataacaagaaaaaaaat
attgcagcagaacgcaagcaagcgaaggtagagaaggaggaggcagagcattaccagatg
cttgtcagagaactgaatgcaaacagggtacagcttcaacttttccagctctatcacaat
gaaagaagcattgaatctctgaaagagagtttggatgaaaagaatatggaggctaggatc
aagaaagactccctttctacagcagaagataccttcagagcaaagaaaaaggtgcttggt
gtactaaacagagaccagcaacagatggaaagagaaatgaagactcttcaggcatccctg
attcagcagaaagccctctatataaaagcgaaagaaaatacttcctaccaaatcaagaaa
gtagaaatgtctaaaagatctctaagggacaaggagaaatactgtgataaggaaaaacag
aacataaaagaactagagatggaattgcatgatactgagaaggcatggagagaatttgag
aaggaagctgaagaggagatattgctgagagtagaacgtgttgagctgagagagcgtcag
ctggagcgctataaagaactgaaggaaatagcaagaaggaaagtagctacactaacgcag
cagctaggtaaacttcgttgggaacaaaaagcagatgaagaaaggatgaaactttatcag
aggaagaaaaaagaagttaaggaaaccattgtacagactgtggaacagatagaggagtat
aaaaaacgagtagagaagttggaagaatataccaagaaatgcactgagtcactggaagaa
gaaaaaaagaaggaggaaatgctagctaaggaaatagagaattcaacaacacgaatagct
gaagtgaatgaagaattgaacaaaatagttggtgaactacagaatgccagaattgattac
catgagggaaagcgtcagcaaatgagagcagagattgttgaaagtctaaaaagactgtat
ccagattctgtgtttggaagattgcttgacctgtgccatcctattcataagaaatatcag
cttgctgttaccaaagtattcagcaaatatatgactgctattgttgttgccactgaaaaa
acagcaagagattgcattcagttcctaaaacaagaacgagctgaacctgaaacattcctt
gctttggattaccttgaggtcaagcccatcaacgagaggttaagagagataaaaggagct
aaaatgattgtggatgttgtgcaaactccatttgctccattgaaaagagtgattcagttt
gtgagtgggaatggcttggtctgtgacacagttaaagaagcaagacaaatagcatttgag
ggaccagtgagattgaagacggtggcacttgatggaacattatttctgaaatctggagtg
atttctggaggatctagtgatttaagagttaaagctagatgttgggatgataaagagata
aatagaatgaaagaaagaagagatgcattgattaccgagctgaaggacttaatgaagatc
aaacgcaaggaggctgatttgaaacagttgcaagctcaatgccatggaactcagacacga
cttaaatattcacagagtgaattagatcttattaaaaagaaacatcttcctaatgtctat
atggaaaagtcaaagctggaaagtgaactagtaaatactgagtctcagcatgatatgata
aaggaaggagtagtacaaagaaaattaaaaatagaagaatttcagaagcagattaatgag
gctgaagatgccgttttccaggaattctgtgaagaaattggtattgaaaatatacgtgtg
tatgaacaagaacacgtgagaagacaagaagagattgataagagaagattggagtttgaa
aatcagaagacgcgactaagtgttcagctggaatataatcgtgagcatctacagaaacta
acagatgcagtcagcaagttaagggataccattcataaagatgaatctgagattgcagga
ctacagaaggatgaggaaaagcatctaaaaagggtgaacgaaattgaagaggaggagcag
catcttaaagatagattaagtgctcagaaatctgagattatgaaaacccaaagcgaagca
gatgagttgagaaaaacgcttttaactcttaatagggaggctgcaaaattacaaaaggaa
gctgcagctatagaagcttctctggaagataagagattaagaagacataatatgcttcta
gaatgcaaggtgcaggacttgaaaatacgtctcctgtttggatcgttggatgacatcagt
gaagtagagctaggaactgaaacagaagacactcagactacaggtatctatgaaagagaa
gaggcaattaaaatagactacagtagcctacctaaagacctgaaggacctagagtctgat
aaagagatagaggctcatctgaaccagatgcagcaggaaataaaatctaaagagagtatc
ttaatgaagacagctgttccaaacctgagagcagtagagaagttacagatagctcggaac
aaattccaggaatcaatggaagcttttgaggccagcagaaaggaggccagaatatccaag
caagaatttgaagaggtgaaaaaaaggagatatgaactttttagccagtgctttgagcat
gcgtccatagttattgatcaggtctacaagaaactttgcagaaacagtagtgctcaggca
ttccttagccctgagaatcctgaggagccttatctggaaggcataggctttaattgtgtg
gcacccggaaagcgctttatgccaatggacagtttgtcaggaggagaaaaaactgtggcc
gctctggctctaatatttgctgtacacagttttcggcctgcaccattttttatattagat
gagatagatgctgccctggataacacaaacattgataaagtatcaattttcattagggaa
caggcacataaacagtttcaaatggttgttatttccctaaaggaagagttttattccaaa
gcagatgcattgattggagtgtgtccagagcatgatgactatatgtttagtcgagtactg
actttggatcttacccagtatccagaggatgaagaagcagcagagaatcacaaacgtact
tctttagaataa
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