Gallus gallus (chicken): 418482
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Entry
418482 CDS
T01006
Symbol
LTN1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gga03009
]
418482 (LTN1)
04121 Ubiquitin system [BR:
gga04121
]
418482 (LTN1)
Enzymes [BR:
gga01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
418482 (LTN1)
Ribosome biogenesis [BR:
gga03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
418482 (LTN1)
Ubiquitin system [BR:
gga04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
418482 (LTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
LTN1_E3_ligase_5th
zf-RING_2
FANCL_C
zf-ANAPC11
zf-rbx1
RINGv
HEAT_GCN1
zf-RING-like
zf-RING_16
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
418482
NCBI-ProteinID:
NP_001292090
CGNC:
11789
Ensembl:
ENSGALG00000015804
UniProt:
A0A8V0Y5B5
LinkDB
All DBs
Position
1:complement(105298701..105326293)
Genome browser
AA seq
1770 aa
AA seq
DB search
MGGKNKQRTKGNVRPSSSGRAAELLAKERGTVPGFIGFGTSQSDLGYVPAVQGAEEIDSL
VDADFRMVLRKLSKRDIITKLKAMQEFGTMCKEREAEVVKGVLPYWPRIYCKISLDHDRR
VREATQQSFEQLILKVKKHLAPYLKSIMGYWLIAQCDTYSPAASAAKEAFEKAFPSSKQP
EALAFCKDEILNVLQDHLLKETPDTLSDPQTVPEEEREAKFFRILTCSLLALKKLLSMLP
KKEMHSLEEKLMSLLSQNKFWKYGKHSTPQVRSAFFELASAFCQFLPELVKAEAPRVCPA
VLLSIDDSDAVVCPALWEAVLHAIATIEDCWSHVNARKGVLPKLWTVLREGGRGLATVIY
PNILPFISKVPPGITEPKLEYFRTFFSSIIQGLSNERALASPSESSAIITTFMECLRFAI
LQKIDEDEQRQIHQMLIYDQLIPLTDAVLQEPRLQNGPLFYQIAETLSSWEAKAEVSSDD
NTNEVFQKLLSNFWDRLLKMCILHVDKLEADEKTLFAISDMLEVLQNPKTATKPNNRKSL
KVKFSDEDESERNTENGKITEVRSNSDSEIQADLQHSSILRKEPLENLVCNLAELSIVYV
NEQKSEQHLKFLSALLNFFSSNRVFQVLLEQGSNAGCPPAESQEDMKVHNENPSVQFLYM
NLITWLKEDWRKDMHFLVDILYSVLNCCNSDDERKVILDDLTKMDLKWIVFLQIIQKACS
STTKLSLISEWLKGDMLGERLVMLADDLCHLGLKPIATSPESSSSEKWTVLSLVLSQHIK
NESLIGETYVERIIDKLQAALSKAKDLSEAGNTEPSVSFICDVASSFFSSVKGCLLMPSS
EDLLLTIFQLCAQRQDATHLTDLLVCKLKHTWISGVNSLVRHLRSMQNQSTFLHKSALWI
KNQIQSSSLDVKSLQVLISAVSDLLSTLLEADRQSGCLVGAYVEHVMPNRTEWETLRESL
SAEWMHKPLLEGRLSMNCEHLGSCVKLCGTTKLPGHLCTSALLSKMVLLVLENDMVKGNE
DAERKKIDNIIAELLYSLQWIEELENPPYLLLEYLHMLEEMHITYEKFSALSNTTNLQQT
IFDRSEEHGRLWSLTMAKVIRGENAVSREMTKLFKTSEGFLPLTEGRLHTLQCLSPFLIE
EEKRELVFHCVAKLMTCTQTELSSTDGAFGCLAILNSSLNDKSFGCDHLLPGVLKIIISW
KNDNEDSFLFSCNLKETSAQLLGFNIEMIRYLPLLLKYSTAPLADNEWDFIMCSMLAWLE
TTSENYSLYHVPLVQIFACVSCDLASALSAYFEPAAPKTTENLPVNLVSEWKEFFSEGIH
NLLLPLFVKVTGETKTAAEGSFQNSVLTSLGEALTYISKDQLLNHKLPAKFVAGQKTNLP
DNLQTLLNTLSPLLLFWARSVQVSVYHMLSKLMPELPKFDDEDLKSYGDEEEELALSPPA
ALMSVLATQELLLENILECIPVGEFAVIQPLSDEFCLVLGYLLTWKLTLTFFKAASSQLR
VLYSQYLRRTKSLNKLLYHLFRLMPENPVFSGLTSEVPNKDTKTFFTEELHLDVKGTGAL
SSQIPHLACSVYHITLKDLPAMVRLWWNSCEKRVFNVVDKFTSKYVSSVLSSQEISSVQT
STQLFNGMTVKARSAAREVIATYSVDDIFIELIIQLPSNYPLGSITVESGKRVGVAVQQW
RNWMLQLSTYLTHQNGSIMEGLSLWKNNVDKRFEGIEDCMICFSVIHGSNYSLPKKACRT
CKKKFHSACLYKWFTSSNKSTCPLCRETFF
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atggggggcaagaacaagcagcggaccaagggcaacgtgcggccttccagcagcggccgg
gctgcggagctcctcgccaaagaacgcgggacagtgcctgggtttatcggctttggaaca
tcgcagagcgatctgggttatgttcctgcagttcagggtgcagaggaaatagacagcctc
gtggatgctgattttcgaatggtcctgcgaaaactctctaaaagggatatcataacaaaa
ttaaaagctatgcaagagtttggtacaatgtgcaaagaaagagaagcggaagttgttaaa
ggtgttcttccttactggccaagaatttattgtaaaatctcactggatcatgatcgccgt
gttcgagaagcaactcagcaatcttttgagcaactgattcttaaagtgaagaaacacttg
gcgccttacttaaaaagtatcatgggatactggttaattgcacaatgtgacacttactcc
cctgctgcttctgctgcaaaagaagcttttgaaaaagcttttccttcaagcaaacaaccc
gaagccttagcgttctgtaaggacgaaattcttaatgttcttcaagatcaccttctgaaa
gaaacacctgacacgctcagtgatcctcaaactgtaccagaggaagaaagagaagccaaa
tttttccggattttgacctgttccttgttagctttaaaaaagttgcttagcatgctgcca
aagaaagagatgcattcattggaggaaaaattaatgtcacttctgtctcaaaacaaattt
tggaaatatggtaaacacagcacaccacaggttcgttcagctttctttgagctggcttct
gctttttgccagttcttgcctgagctggtgaaagctgaagcaccgagagtttgtcctgct
gttcttctcagtatcgatgacagtgatgcagtggtgtgtcctgctctttgggaagctgtc
cttcatgctattgccactattgaggactgttggagtcatgtaaatgccagaaaaggagtt
ctaccaaaactgtggacagtacttcgagaaggtggacgaggactagctactgttatatac
ccaaatatcttgccgttcattagcaaggtacctcctggcatcacagaaccaaagctggag
tatttcagaacgtttttcagctcaataattcaagggttgtcaaatgagcgagcactagcc
agtccttcagaaagttcagcaattataactacttttatggaatgtctgcgctttgccata
ctacagaagatagatgaagatgaacaaagacaaatacatcaaatgctaatatatgaccag
ctaattcctctaactgatgctgtacttcaggagcccaggttacaaaacggaccattattt
tatcaaatagcagaaacactaagctcctgggaagcaaaagctgaagtctccagtgatgat
aatacaaatgaagttttccaaaaactactgtcaaatttttgggaccgtcttttaaaaatg
tgtatacttcatgttgataagttggaggctgacgagaagacactgtttgccatatctgat
atgctggaagttcttcagaatccaaagactgctacaaaaccaaacaatagaaaatctctg
aaagtaaaattttcggatgaggatgaatctgaaaggaacacagagaatggaaagatcaca
gaagtgaggagtaatagtgactctgaaatacaagctgacctacagcatagttcaattctg
aggaaagaacctttagaaaacttagtctgcaaccttgctgagctgagtattgtgtatgtc
aatgaacagaagtcagagcagcatttgaaattcctttctgccctcctcaacttcttttct
tcaaacagagtttttcaagtacttttagaacagggaagcaacgcaggctgtcctccagct
gaatcccaagaagacatgaaagttcataatgaaaatccatctgtacaatttctgtatatg
aatttaataacttggcttaaagaagactggaggaaagacatgcattttctggttgatatt
ttgtacagtgtgcttaactgttgcaacagtgatgatgaaaggaaagtcattcttgatgat
ttaacgaagatggatctgaaatggattgtttttctccagataattcagaaggcatgctct
agcacaacaaaactttcattaatatctgagtggctgaaaggagatatgcttggagaaaga
ctggtaatgctggcagatgatctgtgtcacctgggtttaaaaccaatagcaacctcacca
gaatcatcctcttcagaaaaatggactgtcctgagcttggtattgtcacaacacattaaa
aatgaatctttgattggtgaaacttatgtcgaaaggattatcgataaacttcaggcagct
ctgtctaaagctaaggatctttcagaagctggaaataccgaaccgtcagtgtcttttatc
tgtgatgtagcctcaagctttttcagttcagttaaagggtgtttactgatgccatcctca
gaagacttgctgcttaccatcttccaactgtgcgctcagaggcaggatgctacacatcta
acagatttgcttgtatgcaagttaaaacacacttggatatctggtgtaaactcactcgtc
cgtcatcttcggagtatgcagaatcagagcacctttttgcataaatctgcactgtggatc
aagaatcagattcagtcttcctctttggatgtcaaaagccttcaggttttgatctctgca
gttagcgatttattgtctacacttctggaagctgacaggcaatctggatgtcttgtggga
gcttatgttgagcacgttatgcccaacagaactgaatgggagacattgcgtgagtctctg
tctgctgagtggatgcacaaacctcttttggaaggaaggctgagtatgaattgtgaacat
ttgggatcatgtgttaagctatgtggcacaactaaacttccaggacatctgtgtacttca
gccttattaagtaaaatggtgctacttgtactggaaaatgatatggtgaagggaaatgag
gatgctgaaagaaagaaaattgacaatataattgcagaactgttgtattcattacaatgg
attgaagaattggaaaatcctccttatctgcttctggaatatcttcatatgttagaagaa
atgcacatcacatatgagaagttcagtgcactcagtaatacaactaaccttcagcaaaca
atatttgatagatcagaggaacatggaagactctggtccttaaccatggccaaagtgatt
cgtggagaaaatgctgtatcccgtgagatgacaaagctttttaagacaagcgaagggttt
ctgccattaacagagggcagattgcatacccttcagtgcctatcaccctttttaattgag
gaagaaaagagagaacttgttttccactgcgtggccaaacttatgacatgtacacagaca
gagctctccagtactgatggagcttttggatgtctcgccattttgaattcctccttgaat
gacaaaagttttggctgtgatcacctcttacccggagtactaaaaatcataatatcttgg
aaaaatgataatgaggacagcttcctcttcagctgcaatctgaaagaaacaagtgctcag
ttgcttggtttcaacatagagatgatccgctaccttcccttattgctgaagtattctaca
gctcctttggctgataatgaatgggactttatcatgtgctccatgctggcttggttggag
acaacatcagaaaactattcgctctatcatgtcccactcgtgcagatttttgcctgtgtc
agttgtgacctggcatctgccctcagcgcttactttgaacctgcagctcctaagactact
gaaaaccttcctgtgaacttggtcagtgaatggaaagaattcttttctgaaggaattcac
aatttgctgttacctctgtttgtgaaagtcacaggagaaacaaaaactgcagctgaaggc
tcttttcagaactctgtattaacatctttgggtgaagctctaacttacatctcgaaggac
cagttgttaaaccataagctaccagcaaagtttgttgcaggccagaaaacaaatcttccg
gataatctacagactctgttaaatacattatctccgttgctgcttttctgggctagatct
gtacaggtttcagtctaccacatgttgtctaagttaatgcctgaattgcctaaatttgat
gatgaagatctcaagtcctatggtgatgaagaggaggagttagcattatcacctccagca
gctcttatgtccgtccttgccactcaagagctcttgctagaaaacatcctagaatgcatt
ccagttggggagtttgcagttattcagcccctgagcgatgagttctgccttgttctagga
taccttctcacttggaagttgacattaaccttcttcaaagcagcttcttctcagctgcga
gttctctattcacaataccttagaagaactaaaagcttgaacaaactgctttatcacttg
ttcaggcttatgcctgaaaaccctgtcttttctgggctgacttcagaagttccaaacaag
gatacaaaaaccttcttcaccgaagagcttcatttagatgtcaaagggacaggagccctg
tcatcccagatcccccatttggcttgttctgtgtatcatataacactgaaagacttgcca
gccatggttaggctttggtggaatagctgtgagaaacgtgtcttcaatgttgtggataaa
tttacaagcaagtatgtcagcagcgtgctttcttcacaggaaatatcttctgttcagact
agcacacagctatttaatggcatgacggtaaaagctcgatctgctgcacgagaagtcatt
gctacctattcagttgatgatatatttattgagctaataatacagcttccatcaaattac
ccactggggtctataacagttgagagtggaaagagagttggtgtggctgttcagcaatgg
cgcaactggatgctgcagttaagcacatatcttacacatcagaatggaagtattatggaa
ggcctatctctgtggaaaaataatgtggataaacgttttgagggcatcgaagattgcatg
atctgtttttcagtcattcatggttccaactattctctgcccaaaaaagcttgcagaaca
tgcaagaaaaagtttcattcagcttgcttgtacaaatggttcacatccagtaacaaatcc
acctgtccactttgtcgagagacattcttctga
DBGET
integrated database retrieval system
