Gallus gallus (chicken): 418498
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Entry
418498 CDS
T01006
Symbol
SYNJ1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
gga
Gallus gallus (chicken)
Pathway
gga00562
Inositol phosphate metabolism
gga01100
Metabolic pathways
gga04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
418498 (SYNJ1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
418498 (SYNJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gga04131
]
418498 (SYNJ1)
Enzymes [BR:
gga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
418498 (SYNJ1)
Membrane trafficking [BR:
gga04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
418498 (SYNJ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
418498
NCBI-ProteinID:
XP_015155289
CGNC:
11868
Ensembl:
ENSGALG00000034317
LinkDB
All DBs
Position
1:complement(106350128..106412028)
Genome browser
AA seq
1586 aa
AA seq
DB search
MAFSKGYRVYHKLDPLPFSVIVEARNREECLMFESGAVAVLSSAEKDTIKNTYSKVMDAY
GLLGVLRLNLGDTLLHYLVLVTGCMSVGKIQDSEVFRVTSTEFVSLRIESTDEDRISEVR
KVLNSGNFYFAWSATGVSLDLSLNAHRSMQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIYLD
DSVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKNLYGKQIIVN
LLGAKEGEHMLSKAFQSHLKASEHSADIKMVNFDYHQMVKGGKAEKLHSVLKPQVQKFLE
CGFFYFDGKEVKRSQSGTVRTNCLDCLDRTNSVQAFFGLEMLTKQLEVLGLAEKPQLVTR
FQEVFRSMWSVNGDSVSKIYAGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAID
VLLLGNTLNSDLADKARALLTTSSLRVSEQSLQSASVKVLKSMCENFYKYAKPKKVRVCV
GTWNVNGGKQFRSIAFKNQTLTDWLLDAPSIAGIHEFQDRRSKPVDIFAIGFEEMVELNA
GNIVNASTTNQKLWAAELQKTISRDYKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDT
VKTGMGGATGNKGAVAIRMLFHTSSLCFVCSHFAAGQSQVKERNEDFIEIARKLSFPMGR
MLFSHDYIFWCGDFNYRIDIPNEEVKELIRQQNWDSLIAGDQLINQKNSGQIFRGFLEGK
INFAPTYKYDLFSDDYDTSEKCRTPAWTDRILWRRRKWPFDRSAEDLDLLNASFHDNSKV
PYTWNPGTLLHYGRAELKTSDHRPVVALIDIDIFEIEAEERQKVYKEVIATQGPPDGTVM
VSIKSSSAEENYFDDNLIDDLLQKFANYGEVILIRFVADKMWVTFLEGSSALNVMNLNGT
EILGRIINISLKNPDWIRSLEDEMNLEKINVGLPSSTSSTLLCEDAEVTADYDMEGDIDD
YSAEVEEILPQHLQPTSSSGLGTSPSSSPRSSPCQSPTLSDGPTLPVRPSRAPAKTPGPP
VSVHNETQLGTQQKDTSQTLEPKRPPPPRPVAPPARPAPPQRPPPPSGGRSPAPARKEFG
GLGAPPSPGVAKREVEAQKSPGTQRKDNLVRSQPPPSTGFSSAGTVGYAAARPTIPPRAG
VISAPQSHVRPSGGRPTPEPQTKPAEPPRGSPLLPEPLKPQAAPAQPVTQPPPALKMQEP
LIPVASHPPQTSAPPSLEPPPQPPPRSRSSHTLPSESAPSQQQIKTNGTYGTKLETQLNS
DPFEDLSFQLLVSKMQTSARTSAVPTLNQKETMQLPSATQRNDILNTVSCMPAMPPAPTL
NISQEHTRSSPNPFVTGLNSTNPFTERTLTAGNPFRTETREPEITSHLQEGHAAFNPFPS
LNPSSSNTSKPVFSVDAPENSFCLRSRSLMVKHVQPKGWVTFDEEDENFHVKLKPSKSVP
DFKQIGSRKSAGSPDLLGTEQNTFLGSDFTFGNDWNKSSTDCFYTMPARRPPAPPVPSRV
TSNRSPADPFTSLAPKVSPTQDFTER
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atggctttcagtaaaggatatcgtgtctatcacaagctggatccactcccgttcagcgtg
atagtggaagccagaaacagagaagaatgtctcatgtttgaatctggagctgtggctgtc
ctctcatctgcggaaaaagatacaatcaagaatacctactccaaagtaatggatgcatat
gggcttctgggagtattaagattaaacctgggagacacgttgctacattatttggttcta
gtaacaggatgcatgtctgtgggaaagattcaagactctgaagtctttcgagttacctcc
actgaattcgtatcgttacgaatcgaatcaacagacgaagatcgtatttcagaagtgcgc
aaagttttgaattcaggcaacttttattttgcatggtctgccactggtgtcagcttagat
cttagtctcaatgctcaccgcagcatgcaagagcacaccactgacaacaggtttttctgg
aatcagtcactgcatttacatctgaagcactacggtgtgaattgtgatgactggttgtta
cgtctcatgtgtggaggagtggagataaggacaatttatgcagctcacaagcaggcaaaa
gcttgtctcatttcacgactaagctgtgagcgagctgggaccaggtttaacgtccgggga
accaacgatgatggccacgttgctaattttgttgaaacagagcaggtgatatatttagat
gattctgtgtcatctttcatccagattcgagggtctgttcctttgttttgggagcaacca
ggcctgcaggtggggtcccatcgtgtcagaatgtcaagaggtttcgaggcgaatgcacca
gcttttgacaggcatttccgaactcttaaaaacttatatggcaaacaaattattgtgaat
ttacttggggcaaaagaaggggagcacatgctcagcaaagcttttcagagccacttaaaa
gcatctgaacattcagctgatatcaaaatggtgaactttgactatcatcaaatggttaaa
ggtggaaaggcagaaaaactacacagtgtgcttaagcctcaagtccagaaattcttagaa
tgtggatttttttattttgatggaaaggaagttaaaagatctcaaagtggtactgtcaga
acaaactgcttggactgtctggatagaacaaacagcgtgcaggctttctttggcttagag
atgctaacaaaacaactggaggtgttaggattagctgagaagcctcagctggttactcgc
tttcaggaagttttccgatccatgtggtctgtgaatggagattctgtcagtaaaatttat
gctgggactggagcccttgaaggaaaagctaaggctggaaagctgaaggatggtgctcgt
tctgtgaccagaacgattcaaaataacttttttgatagctccaagcaggaggccattgat
gttttgttattgggaaataccttaaatagtgatttagcagataaagcacgggctctctta
accaccagcagtttacgcgtttcagagcagtcattacaatcagcatctgtaaaagtgctg
aagagtatgtgtgaaaacttttataagtatgcgaaacccaaaaaagttcgagtctgcgtt
gggacgtggaacgtcaatggggggaagcagtttcgaagtattgcctttaaaaatcagacc
ctcactgactggcttctagatgcaccaagcatagctggtattcatgaattccaagatcga
agaagcaaacctgtagacatatttgccattggatttgaagaaatggtggagttaaatgca
ggaaacattgtgaatgcaagcacaaccaatcagaagctctgggctgcagaactgcagaag
accatatcgagagattacaagtatgtgctgctggcttccgagcagttagtgggtgtctgc
ctctttgtgttcatcaggccccagcatgctccctttatcagggacgttgctgttgatact
gtaaagactggcatgggaggagccactggtaataaaggtgcagtagcaattcggatgctg
tttcatacatccagtctttgctttgtctgcagccattttgctgcagggcaatcacaagtt
aaagaaagaaatgaagacttcatagaaatagctcgcaagctcagttttccaatgggaagg
atgcttttttcccatgactacatcttttggtgtggtgactttaattaccgaatagatatt
cctaatgaggaggttaaggagctaatccgacagcaaaactgggattcccttatagcagga
gaccagcttatcaatcagaaaaattctggacagatttttaggggatttttagaggggaaa
ataaattttgctcctacatacaagtatgatctgttttctgatgactatgacaccagtgaa
aaatgtcgcacgccagcttggacggatcgtattctttggagaagaagaaaatggcccttt
gaccgatcagctgaagacctggatcttctgaatgctagctttcacgataacagtaaagtc
ccttatacgtggaatcctggtactttgttgcactacggaagagcagagctgaagacatct
gaccacagacctgtggtggcgttgattgacattgacatatttgaaatcgaagcagaagag
agacagaaagtttataaagaggtgattgcaacacagggaccacctgatggcacagtaatg
gtctccatcaaaagttcttcagcagaagaaaactactttgatgataacttgattgatgat
cttcttcaaaaatttgcaaactacggagaggttatacttataagattcgtggcagacaag
atgtgggtaacgtttttggaaggaagctctgctttgaatgttatgaatttgaacggtact
gagatactaggaaggattataaacataagcttaaaaaatccagactggatcagaagtttg
gaggatgaaatgaatctagagaagattaacgttgggctgccttcgtcaacaagctctact
ttgctttgtgaagatgctgaggttactgcagactatgatatggaaggtgacattgatgac
tatagtgctgaagtagaagaaatccttcctcagcacctgcagccaacctcaagctctggc
ctcggaacctccccaagctcctcaccacgttccagtccctgtcagtcccctacgctgtca
gatggacccacgctcccagtgagaccgagccgagccccagcaaaaactcctggaccacca
gtttccgtgcacaatgaaactcaacttggtacccaacagaaagatacttctcagaccttg
gagcccaagcgccctccaccgcctcgccctgttgctcctcctgcacgtcctgctccacca
cagagaccgcctccaccatcaggcggtaggagtcctgcacctgctagaaaggagtttgga
ggtcttggagctcctcccagtcctggggtagctaagagagaagtagaagcacaaaaaagt
cctggaacacaaagaaaagataacttagttcgtagtcagcctccaccttcaactggattt
tcaagtgcaggaactgttggatatgctgctgctcgtccgactattccacctcgagctgga
gttattagcgcaccacaaagccatgtccgcccctctggtggaagaccaacacctgaacct
caaaccaaaccagctgaaccaccaaggggctccccgttgcttcctgaaccactaaagcct
caggctgctcctgcccagcccgtgactcagccaccacctgcgctaaagatgcaagagcct
ttgatacccgtggcatcacatccacctcagacaagtgccccaccaagtctggaaccgccc
ccacaaccacctcctcgtagccgatcatcccacactttgccttctgaatctgctccttca
cagcagcaaattaaaacaaatggaacctatggcactaaacttgaaacacagttaaatagc
gacccttttgaagatttgtcatttcagctgcttgtgtcaaagatgcagacatctgctcga
acatcagctgttccaaccttaaaccaaaaggaaacgatgcagttgccttccgcaacacaa
agaaatgatattttgaatactgtaagttgcatgccagcaatgcctcctgctccaaccctt
aacatatcccaggaacacacgcgcagctctccaaatccatttgttactgggctgaacagc
acaaatccattcactgaaagaacgcttactgctggaaacccatttagaacagaaactcga
gaacctgaaataacttcacatttacaggaaggacacgccgctttcaatcccttcccttct
ctaaatccctccagttctaatacaagcaagcctgtattttctgttgatgcacctgaaaac
agtttttgcttgcgaagtagatctctcatggtaaaacatgtacagccaaaaggatgggta
acttttgacgaggaggatgagaatttccacgtaaagctaaagccatctaaaagtgttcca
gattttaagcaaatcggttccaggaagtcagctggatctccagatttgctgggcactgaa
caaaatacttttcttggttcagactttacctttggtaatgactggaataaaagttctact
gattgtttctatacgatgccagcaagaagaccgcctgcacctcctgtcccatcgagagta
accagcaacagatcccctgcagatcctttcacttctttggcacctaaggtgtcgccaacg
caagattttacagaaagatag
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integrated database retrieval system
