Gallus gallus (chicken): 418734
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Entry
418734 CDS
T01006
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X2
KO
K14328
regulator of nonsense transcripts 3
Organism
gga
Gallus gallus (chicken)
Pathway
gga03013
Nucleocytoplasmic transport
gga03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
418734 (UPF3A)
03015 mRNA surveillance pathway
418734 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
418734 (UPF3A)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
418734 (UPF3A)
mRNA cycle factors
P-body specific factors
418734 (UPF3A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
418734
NCBI-ProteinID:
XP_025002460
CGNC:
12615
Ensembl:
ENSGALG00000016815
LinkDB
All DBs
Position
1:complement(136926882..136949804)
Genome browser
AA seq
437 aa
AA seq
DB search
MRSEREPGLGLVRGGGGGREKRSMEVPLRRESPRREPDTTTNPPSSPAPPLPPAPVKQRD
EKKTALSKVVIRRLPPCLTKEQLEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFRNP
EDILLFRDRFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFL
ESYCADEEKICANPETLLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRR
RELEKKRLREEEKRKRREEERRKRKEAEKHKKISEKEIRIKLLKKPEKGDEPASEKHKEK
DEEADTEENKWDKSPGPGSIRSKSLEGSLKELKEKSQNDSDKEQRDLERRFREKEPERQR
IAQPCSCTSQGLASEHIRDPRVKPTTAVGSLLKMLLTRSMRWITQWEVALRRVRKQNKTN
RRKDLWKGMNFRFNITT
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcggagcgggagcctgggctggggctggtgaggggcggcggcggtggccgcgag
aagcggtcgatggaggtccctctgcggcgggagtctccgcgccgggagccggacaccacg
accaacccgccgtcgtccccggcgccaccgcttcctccggcgccggttaaacagcgagat
gagaaaaaaacggcgctgagcaaagtagttattcgacggcttcctccttgtctaaccaag
gagcagctggaggagcagctccaccctctccctgctcatgattattttgagttttgcact
gctgatcccagcctttatcctcatctctactcaagagcatacattaactttagaaatcct
gaggacatccttctttttagagatcgctttgatggctatgtcttcattgataataaaggc
ttggagtaccctgcagtggttgaatttgctccatttcagaagatttcgaaaaagaaatta
aaaaagaaagatgccaaagctgggagcattgaagatgatccagaatataggaaattttta
gaaagctactgtgctgatgaagagaaaatctgtgccaatcctgagactcttttgggagag
attgaggccaaaacaagggaactcattgctagaagaacaacaccccttttggaatatatt
aaaaatagaaaattagaaaagcagagaatccgagaagagaaaagggaagagcgaaggcgg
agggaattggagaagaagcggctgagagaagaagagaaaaggaaacgcagagaagaggaa
agacgtaaaaggaaagaggcagagaaacacaagaaaatatctgaaaaagaaataaggatc
aagcttcttaagaagcctgaaaaaggagatgagccagccagtgagaagcacaaagaaaaa
gatgaagaagctgacactgaagaaaacaaatgggataagtctcctggacctgggagcata
agatccaaatcattggaaggttcactaaaagagcttaaggagaagtcacaaaatgatagt
gacaaagagcaaagagacttggagagaagatttcgagaaaaagaacctgaaaggcaaagg
atcgcccagccatgcagctgtaccagccaggggctcgcatccgaacacatacgggatcca
cgagtaaagcctacgactgcagtgggaagtcttctgaagatgctcttgacaagaagtatg
aggtggataactcagtgggaggtggctctgagaagagtgaggaagcagaataaaacaaac
cggaggaaagacttgtggaaagggatgaacttcagattcaacatcaccacgtag
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