Gallus gallus (chicken): 418752
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Entry
418752 CDS
T01006
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain precursor
KO
K06237
collagen type IV alpha
Organism
gga
Gallus gallus (chicken)
Pathway
gga04510
Focal adhesion
gga04512
ECM-receptor interaction
gga04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
418752 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
418752 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
418752 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gga04147
]
418752 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
gga00536
]
418752 (COL4A2)
Exosome [BR:
gga04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
418752 (COL4A2)
Glycosaminoglycan binding proteins [BR:
gga00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
418752 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
418752
NCBI-ProteinID:
NP_001155862
CGNC:
12638
Ensembl:
ENSGALG00000016843
UniProt:
A0A8V0YNS3
LinkDB
All DBs
Position
1:140249172..140391078
Genome browser
AA seq
1715 aa
AA seq
DB search
MDLSPLPGARVSVCQDVGLLLVLLEVVLSAGRVDAGGKSYTGPCGGRDCSGGCQCFPEKG
ARGQPGILGSQGFPGPPGLMGIPGLQGPKGHKGERGHPGISGPKGETGQRGVTGFPGADG
VPGHPGQPGSRGKPGHDGCNGTVGDPGDPGTPGHSGFPGTIGVQGPKGQKGEPYVLPPDI
ASRHRGDPGDPGFTGFPGAPGTLGIQGPIGPRGVPGRPGPPGSPGPQGPQGNRGLGFYGE
KGEQGSPGPPGPPGLPTRELIGVPTDKHKGERGEPGQKGEAGFPGVLLFAPEKGEEGVMG
FPGQRGLPGNDGFPGLSGERGFPGFDGQPGQYGPRGGKGEQGEMGPPGPPAYVPYRIPRK
GVRGDPGSPGASGLRGEQGEQGDRGLPGIPGFSDGDADKPGLPGEIGPKGEKGEEGSPAY
QAGPPGFPGKHGEPGIRGPPGPPGTPGSLFGLKGQEGTPGRPGVQGFPGPRGQRGPKGEE
GDCSKCLLSDELRRGSTGPRGPPGFPGTPGQPGRKGEPGDQGPHGIPGYAGAKGQSGQEG
LPGPKGEKGDSIYITTKGTKGIRGDPGLPGIRGEDGFPGRDGLDGLPGLPGLPGDGIRGL
PGDPGYPGELGPKGFPGEIGLPGEGYPGPKGYRGLPGDRGTDGHPGPPGLPGPPGEPGQL
DCGQVIEDFSRGEATDPIWSGGGCVRPPKGSQGNPGLPGATGTKGARGFPGDPGPVGFPG
LNGTRGDPGREGYPGPPGFIGPRGDRGPNGLPGLQGHPGLMGKSGAPGLAGQKGAPGDVL
GAAAGPRGDDGLPGFPGLKGAPGDQGIPGIRGADGNPGLPGPKGDPGLQGLPGLMGLPGT
PGTHGFPGPPGNRGPDGGPGSQGPLGPPGARGEDGEQGFPGPVGMKGLSGDKGETGFPGL
QGIPGVTGPPGISGMDGFPGDKGSRGSPGIDGFKGMPGLKGRPGIKGIKGEFGLLGTRGD
KGAQGARGFKGDRGEQGPPGEPPKLKPSMMMEVKGEKGDAGETGTKGFFGIKGSKGMPGL
PGKTGIPGSPGHPSYVPGVKGDIGAKGLTGLKGYPGPTGSPGIRGFPGSTGGRGDKGAPG
ISGHFGTPGSHGEIGEPGDTINLPGMPGLKGEVGVPGLTGLRGGPGQKGEGGDPGLPGIE
GLKGIQGVPGSLGQKGLPGLVGPPGQQGSPGTPGFQGEKGAPGWPGLPGQAGLPGLRGIS
GLHGLPGTKGLPGSPGPDGYGSAGFPGPVGDKGEAGEPSRVEGSQGPPGQKGDRGVPGVQ
GPFGIPGQDGLPGPPGISNISGYPGDTGSPGLDGVPGYPGLHGQPGIPAPPGSKGESGRA
GVSGQAGPKGTRGDPGLPGRPGIPGYPGPKGRKGEQGVIGFIGTVGFPGDLGPIGPKGDR
GLTGFQGPPGSPGLPPIPPRLVAEQGSPGPRGNAGPRGSPGDAGPQGPPGEPGLRGLPGE
PGLQGRGGIPAPPGSRGEQGAMGFQGPVGFEGQPGRPGSPGLPGMPGRSVSIGYLLVKHS
QSDQEPMCPIGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICY
YANRNDKSYWLSTTAPLPMMPVAEEEIRPYISRCSVCEAPAVAIAVHSQEASIPRCPEGW
RSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWL
TTIDQPFQSKPSADTLKAGLIRSHISRCQVCMKNL
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggacctttcaccgcttcccggcgcgcgtgtttctgtttgtcaggacgtggggcttctg
ctggtgctgctggaggtcgtgctgtcggccggcagagtcgatgccggtggaaagagttac
acaggaccatgtggaggaagagactgcagtggaggatgccaatgtttccctgaaaaagga
gcccgtggccagccaggaatccttggatcgcaggggttccctggaccaccaggattgatg
gggatcccaggactgcaaggccctaaaggtcacaagggtgaaagaggacatccaggaata
agtggacccaaaggagaaacggggcaaagaggagtcactggtttcccaggggcagatggc
gttcctggtcatccagggcagccaggatcaagggggaagccaggtcatgatggctgtaat
gggacagtaggtgacccaggtgacccaggaacaccaggacactctggtttccctggtacc
attggagttcaaggaccaaagggccagaagggggagccctatgtgctaccgccagacatc
gccagccgacatcggggggatcctggggacccaggattcactggttttccgggagctccg
ggtacattgggtattcaaggacctattggtccaagaggagtgccaggaagacctggacca
ccggggtccccaggaccgcaaggaccacaaggcaacagaggtcttggcttctatggcgaa
aaaggtgaacagggctccccaggtcctccaggtccacctggacttcccacaagagaactg
attggtgtccccactgacaaacacaaaggtgaaagaggagagcctggacaaaaaggggaa
gctggatttccaggtgtacttctcttcgctcctgaaaaaggtgaagaaggggtaatgggc
ttcccaggacaaaggggactgcctggtaacgatggttttccaggactcagtggagaaaga
ggttttccaggatttgatggtcaaccaggtcaatatggtcctagaggaggcaagggggag
cagggtgagatgggtcctccaggaccacctgcctatgttccttaccgcattccaagaaaa
ggtgtaagaggtgatccaggctctccaggtgcttctggactacggggagaacaaggagag
cagggtgatcgtgggctgcctggtattccaggattctctgatggagatgcagataagcca
ggcttacctggagaaataggaccaaaaggtgaaaaaggtgaagaaggatctcctgcttat
caagcaggcccgcctgggtttccaggtaaacacggtgaaccaggaatccgtggtccacct
ggtccccctggaactccaggttctctcttcggattaaaaggacaggaagggacaccaggt
agacctggtgtacaaggttttccagggccaagaggacaaagaggacctaaaggtgaagaa
ggtgactgcagtaaatgccttctgagtgatgaactcagaaggggctctactggcccccgt
ggtcctcctggttttccaggaacccctggccagcctgggagaaaaggagaacctggtgat
caaggtccacatggtattcctggctatgctggagcaaaaggacaatcgggccaagaagga
ttacctggaccaaaaggagaaaagggagattctatatacataactactaaaggcaccaaa
ggaatccgaggagatcctggacttcctggtatcagaggggaagatggtttcccaggcaga
gatggattagatggtttaccaggactgcctggccttccgggtgatggtatcagaggtctc
cccggggatcctggttatccaggagaattaggcccaaagggctttccaggagaaataggc
ctaccaggtgaaggatatcctggcccaaaaggataccgtggtcttccaggtgaccgtgga
acagatggacaccctgggcctccaggtctgcctggtccaccaggagagcctggccaatta
gactgcgggcaggtgattgaagatttttctagaggagaagcaactgatccaatatggtca
ggtggaggctgcgtgaggccaccaaagggatctcaaggcaacccagggctgccaggagcc
acaggtactaaaggtgcaagaggattcccgggtgatccaggcccagtgggattcccaggg
ctaaatggtacacgaggtgatccaggtcgggaaggatatccaggtcctccaggctttatt
gggccccggggagacagaggcccaaatggcctacctggactacagggacatccaggtctt
atgggaaagtctggtgctccaggacttgctggacagaagggtgctcctggtgacgttctg
ggagcagcagcaggtcctcgaggggatgatgggctgcctggcttccctggcttgaaaggt
gcaccaggagatcaaggaataccaggaattagaggagcggacggtaacccaggattgcca
ggccccaaaggtgacccagggctgcaaggtctccctggtttgatgggtttgccaggaaca
ccaggaactcatggattcccagggccaccaggaaaccgcggccctgacggtggacccggc
tctcaaggaccccttggtccaccaggtgcaaggggagaagatggcgagcaaggctttcct
ggtcccgtgggcatgaaaggtctgtctggtgacaaaggtgaaacaggtttcccaggatta
caaggtatccctggtgtgaccggtccccctggcattagtgggatggatggcttcccagga
gacaaaggctcaagaggttcacctggcattgatggtttcaaaggcatgccaggcctgaaa
ggaagaccaggaatcaaaggaatcaaaggagaatttggcttacttgggactcggggtgat
aaaggcgcacagggtgcacgaggctttaaaggtgaccgtggagagcaaggtcccccagga
gagcccccgaagctgaagcctagcatgatgatggaagttaaaggtgaaaaaggagatgct
ggagaaactggcaccaagggattctttggcataaaaggtagcaagggaatgccaggcctc
cccggtaagacaggaattcctgggtccccagggcaccccagttatgtgcctggtgtgaag
ggggacatcggtgcaaaagggctgacgggtctgaaagggtatcctggtccgactggctct
ccaggcatcagaggcttccctggcagcacaggaggcaggggagataagggtgccccagga
atttcgggccattttggtactcctggctcccatggtgaaattggtgagccgggcgatact
ataaacttaccaggaatgccaggcctcaaaggggaagttggtgtgccgggtcttacaggc
ttaagaggaggccctggacaaaaaggtgaaggaggtgatcctggtttacctggcattgaa
ggcctcaagggcatacagggtgtacctggctccttgggacagaaaggtttgcctggactg
gtcggccctccagggcagcaaggaagccccgggacgcctggattccaaggagaaaaagga
gctcccggctggcctggcttaccaggacaagcaggcttgcctggcttaagaggaatcagt
ggactgcatggtttaccgggcaccaagggcttaccaggatcaccaggtccagacggctat
ggctctgcgggcttcccaggccctgtgggtgacaaaggagaagcaggagagcccagcaga
gtggagggcagccaaggcccgccgggtcagaagggagacagaggtgttccaggagtccaa
ggaccctttggcattcctgggcaggatggacttccagggcctcctgggatttccaatata
tcaggatatccaggcgatacaggttccccaggtctagatggagtgccaggctatccagga
ctacatgggcagcctggaataccagctccaccgggaagcaagggagaaagtggacgagca
ggtgtgagcggacaagctggccccaaagggacaagaggtgatcctggattaccagggaga
cctgggattcctggttatcctggaccaaaaggtcgtaagggtgaacaaggtgtcattggc
tttattggcacagtaggatttccaggtgatttgggacccatcggacccaagggggataga
gggcttactggctttcagggccctccaggctctcctgggttgccaccaattcctccaagg
ctggttgctgagcaaggttcaccaggtccccgtggaaatgcagggcctcggggaagtccg
ggtgatgcaggacctcaaggtccaccaggagaaccaggtctcagaggcttacctggagaa
ccaggactccagggcagaggtggcattccagctcctcctggatccagaggtgaacaagga
gcaatggggtttcaaggtccagtgggatttgaaggccagccaggtcgtcctggtagccct
gggctgccaggcatgccgggtcgcagcgttagcatcggctacctgctggtgaagcacagc
cagtccgaccaagagccaatgtgcccgattggcatgaacaaactctggagtggctacagc
ctcctgtactttgagggacaagagaaagcacacaaccaggacctagggctggctggctca
tgcttggctcgtttcagtacaatgccattcctctactgtaaccctggggatatttgttat
tatgcaaatcgaaatgacaaatcctactggctctcaactacagcacctcttccaatgatg
cctgtggcagaagaagaaattaggccatatatcagccgctgctctgtgtgtgaggcccca
gctgtggcaattgctgtccatagccaagaagcttctattcctcgctgccctgaaggctgg
cgcagtttatggattggatattccttccttatgcacactgcggctggtgatgaaggcgga
ggacagtcgctggtctctcctgggagctgcctggaagatttcagggctactcctttcatc
gagtgcaatggggcccgtggaacctgtcattactttgccaataagtacagcttctggctc
actacgattgaccagcccttccaaagcaagccatcggcagacacactcaaggcaggactc
atccgaagccacatcagcagatgtcaagtctgtatgaaaaatttatag
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integrated database retrieval system
