Gallus gallus (chicken): 418752
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Entry
418752 CDS
T01006
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain precursor
KO
K06237
collagen type IV alpha
Organism
gga
Gallus gallus (chicken)
Pathway
gga04382
Cornified envelope formation
gga04510
Focal adhesion
gga04512
ECM-receptor interaction
gga04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
418752 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
418752 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
418752 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
418752 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gga04147
]
418752 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
gga00536
]
418752 (COL4A2)
Exosome [BR:
gga04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
418752 (COL4A2)
Glycosaminoglycan binding proteins [BR:
gga00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
418752 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
418752
NCBI-ProteinID:
NP_001155862
CGNC:
12638
Ensembl:
ENSGALG00000016843
UniProt:
A0A8V0YNS3
LinkDB
All DBs
Position
1:140249172..140391078
Genome browser
AA seq
1715 aa
AA seq
DB search
MDLSPLPGARVSVCQDVGLLLVLLEVVLSAGRVDAGGKSYTGPCGGRDCSGGCQCFPEKG
ARGQPGILGSQGFPGPPGLMGIPGLQGPKGHKGERGHPGISGPKGETGQRGVTGFPGADG
VPGHPGQPGSRGKPGHDGCNGTVGDPGDPGTPGHSGFPGTIGVQGPKGQKGEPYVLPPDI
ASRHRGDPGDPGFTGFPGAPGTLGIQGPIGPRGVPGRPGPPGSPGPQGPQGNRGLGFYGE
KGEQGSPGPPGPPGLPTRELIGVPTDKHKGERGEPGQKGEAGFPGVLLFAPEKGEEGVMG
FPGQRGLPGNDGFPGLSGERGFPGFDGQPGQYGPRGGKGEQGEMGPPGPPAYVPYRIPRK
GVRGDPGSPGASGLRGEQGEQGDRGLPGIPGFSDGDADKPGLPGEIGPKGEKGEEGSPAY
QAGPPGFPGKHGEPGIRGPPGPPGTPGSLFGLKGQEGTPGRPGVQGFPGPRGQRGPKGEE
GDCSKCLLSDELRRGSTGPRGPPGFPGTPGQPGRKGEPGDQGPHGIPGYAGAKGQSGQEG
LPGPKGEKGDSIYITTKGTKGIRGDPGLPGIRGEDGFPGRDGLDGLPGLPGLPGDGIRGL
PGDPGYPGELGPKGFPGEIGLPGEGYPGPKGYRGLPGDRGTDGHPGPPGLPGPPGEPGQL
DCGQVIEDFSRGEATDPIWSGGGCVRPPKGSQGNPGLPGATGTKGARGFPGDPGPVGFPG
LNGTRGDPGREGYPGPPGFIGPRGDRGPNGLPGLQGHPGLMGKSGAPGLAGQKGAPGDVL
GAAAGPRGDDGLPGFPGLKGAPGDQGIPGIRGADGNPGLPGPKGDPGLQGLPGLMGLPGT
PGTHGFPGPPGNRGPDGGPGSQGPLGPPGARGEDGEQGFPGPVGMKGLSGDKGETGFPGL
QGIPGVTGPPGISGMDGFPGDKGSRGSPGIDGFKGMPGLKGRPGIKGIKGEFGLLGTRGD
KGAQGARGFKGDRGEQGPPGEPPKLKPSMMMEVKGEKGDAGETGTKGFFGIKGSKGMPGL
PGKTGIPGSPGHPSYVPGVKGDIGAKGLTGLKGYPGPTGSPGIRGFPGSTGGRGDKGAPG
ISGHFGTPGSHGEIGEPGDTINLPGMPGLKGEVGVPGLTGLRGGPGQKGEGGDPGLPGIE
GLKGIQGVPGSLGQKGLPGLVGPPGQQGSPGTPGFQGEKGAPGWPGLPGQAGLPGLRGIS
GLHGLPGTKGLPGSPGPDGYGSAGFPGPVGDKGEAGEPSRVEGSQGPPGQKGDRGVPGVQ
GPFGIPGQDGLPGPPGISNISGYPGDTGSPGLDGVPGYPGLHGQPGIPAPPGSKGESGRA
GVSGQAGPKGTRGDPGLPGRPGIPGYPGPKGRKGEQGVIGFIGTVGFPGDLGPIGPKGDR
GLTGFQGPPGSPGLPPIPPRLVAEQGSPGPRGNAGPRGSPGDAGPQGPPGEPGLRGLPGE
PGLQGRGGIPAPPGSRGEQGAMGFQGPVGFEGQPGRPGSPGLPGMPGRSVSIGYLLVKHS
QSDQEPMCPIGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDICY
YANRNDKSYWLSTTAPLPMMPVAEEEIRPYISRCSVCEAPAVAIAVHSQEASIPRCPEGW
RSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWL
TTIDQPFQSKPSADTLKAGLIRSHISRCQVCMKNL
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggacctttcaccgcttcccggcgcgcgtgtttctgtttgtcaggacgtggggcttctg
ctggtgctgctggaggtcgtgctgtcggccggcagagtcgatgccggtggaaagagttac
acaggaccatgtggaggaagagactgcagtggaggatgccaatgtttccctgaaaaagga
gcccgtggccagccaggaatccttggatcgcaggggttccctggaccaccaggattgatg
gggatcccaggactgcaaggccctaaaggtcacaagggtgaaagaggacatccaggaata
agtggacccaaaggagaaacggggcaaagaggagtcactggtttcccaggggcagatggc
gttcctggtcatccagggcagccaggatcaagggggaagccaggtcatgatggctgtaat
gggacagtaggtgacccaggtgacccaggaacaccaggacactctggtttccctggtacc
attggagttcaaggaccaaagggccagaagggggagccctatgtgctaccgccagacatc
gccagccgacatcggggggatcctggggacccaggattcactggttttccgggagctccg
ggtacattgggtattcaaggacctattggtccaagaggagtgccaggaagacctggacca
ccggggtccccaggaccgcaaggaccacaaggcaacagaggtcttggcttctatggcgaa
aaaggtgaacagggctccccaggtcctccaggtccacctggacttcccacaagagaactg
attggtgtccccactgacaaacacaaaggtgaaagaggagagcctggacaaaaaggggaa
gctggatttccaggtgtacttctcttcgctcctgaaaaaggtgaagaaggggtaatgggc
ttcccaggacaaaggggactgcctggtaacgatggttttccaggactcagtggagaaaga
ggttttccaggatttgatggtcaaccaggtcaatatggtcctagaggaggcaagggggag
cagggtgagatgggtcctccaggaccacctgcctatgttccttaccgcattccaagaaaa
ggtgtaagaggtgatccaggctctccaggtgcttctggactacggggagaacaaggagag
cagggtgatcgtgggctgcctggtattccaggattctctgatggagatgcagataagcca
ggcttacctggagaaataggaccaaaaggtgaaaaaggtgaagaaggatctcctgcttat
caagcaggcccgcctgggtttccaggtaaacacggtgaaccaggaatccgtggtccacct
ggtccccctggaactccaggttctctcttcggattaaaaggacaggaagggacaccaggt
agacctggtgtacaaggttttccagggccaagaggacaaagaggacctaaaggtgaagaa
ggtgactgcagtaaatgccttctgagtgatgaactcagaaggggctctactggcccccgt
ggtcctcctggttttccaggaacccctggccagcctgggagaaaaggagaacctggtgat
caaggtccacatggtattcctggctatgctggagcaaaaggacaatcgggccaagaagga
ttacctggaccaaaaggagaaaagggagattctatatacataactactaaaggcaccaaa
ggaatccgaggagatcctggacttcctggtatcagaggggaagatggtttcccaggcaga
gatggattagatggtttaccaggactgcctggccttccgggtgatggtatcagaggtctc
cccggggatcctggttatccaggagaattaggcccaaagggctttccaggagaaataggc
ctaccaggtgaaggatatcctggcccaaaaggataccgtggtcttccaggtgaccgtgga
acagatggacaccctgggcctccaggtctgcctggtccaccaggagagcctggccaatta
gactgcgggcaggtgattgaagatttttctagaggagaagcaactgatccaatatggtca
ggtggaggctgcgtgaggccaccaaagggatctcaaggcaacccagggctgccaggagcc
acaggtactaaaggtgcaagaggattcccgggtgatccaggcccagtgggattcccaggg
ctaaatggtacacgaggtgatccaggtcgggaaggatatccaggtcctccaggctttatt
gggccccggggagacagaggcccaaatggcctacctggactacagggacatccaggtctt
atgggaaagtctggtgctccaggacttgctggacagaagggtgctcctggtgacgttctg
ggagcagcagcaggtcctcgaggggatgatgggctgcctggcttccctggcttgaaaggt
gcaccaggagatcaaggaataccaggaattagaggagcggacggtaacccaggattgcca
ggccccaaaggtgacccagggctgcaaggtctccctggtttgatgggtttgccaggaaca
ccaggaactcatggattcccagggccaccaggaaaccgcggccctgacggtggacccggc
tctcaaggaccccttggtccaccaggtgcaaggggagaagatggcgagcaaggctttcct
ggtcccgtgggcatgaaaggtctgtctggtgacaaaggtgaaacaggtttcccaggatta
caaggtatccctggtgtgaccggtccccctggcattagtgggatggatggcttcccagga
gacaaaggctcaagaggttcacctggcattgatggtttcaaaggcatgccaggcctgaaa
ggaagaccaggaatcaaaggaatcaaaggagaatttggcttacttgggactcggggtgat
aaaggcgcacagggtgcacgaggctttaaaggtgaccgtggagagcaaggtcccccagga
gagcccccgaagctgaagcctagcatgatgatggaagttaaaggtgaaaaaggagatgct
ggagaaactggcaccaagggattctttggcataaaaggtagcaagggaatgccaggcctc
cccggtaagacaggaattcctgggtccccagggcaccccagttatgtgcctggtgtgaag
ggggacatcggtgcaaaagggctgacgggtctgaaagggtatcctggtccgactggctct
ccaggcatcagaggcttccctggcagcacaggaggcaggggagataagggtgccccagga
atttcgggccattttggtactcctggctcccatggtgaaattggtgagccgggcgatact
ataaacttaccaggaatgccaggcctcaaaggggaagttggtgtgccgggtcttacaggc
ttaagaggaggccctggacaaaaaggtgaaggaggtgatcctggtttacctggcattgaa
ggcctcaagggcatacagggtgtacctggctccttgggacagaaaggtttgcctggactg
gtcggccctccagggcagcaaggaagccccgggacgcctggattccaaggagaaaaagga
gctcccggctggcctggcttaccaggacaagcaggcttgcctggcttaagaggaatcagt
ggactgcatggtttaccgggcaccaagggcttaccaggatcaccaggtccagacggctat
ggctctgcgggcttcccaggccctgtgggtgacaaaggagaagcaggagagcccagcaga
gtggagggcagccaaggcccgccgggtcagaagggagacagaggtgttccaggagtccaa
ggaccctttggcattcctgggcaggatggacttccagggcctcctgggatttccaatata
tcaggatatccaggcgatacaggttccccaggtctagatggagtgccaggctatccagga
ctacatgggcagcctggaataccagctccaccgggaagcaagggagaaagtggacgagca
ggtgtgagcggacaagctggccccaaagggacaagaggtgatcctggattaccagggaga
cctgggattcctggttatcctggaccaaaaggtcgtaagggtgaacaaggtgtcattggc
tttattggcacagtaggatttccaggtgatttgggacccatcggacccaagggggataga
gggcttactggctttcagggccctccaggctctcctgggttgccaccaattcctccaagg
ctggttgctgagcaaggttcaccaggtccccgtggaaatgcagggcctcggggaagtccg
ggtgatgcaggacctcaaggtccaccaggagaaccaggtctcagaggcttacctggagaa
ccaggactccagggcagaggtggcattccagctcctcctggatccagaggtgaacaagga
gcaatggggtttcaaggtccagtgggatttgaaggccagccaggtcgtcctggtagccct
gggctgccaggcatgccgggtcgcagcgttagcatcggctacctgctggtgaagcacagc
cagtccgaccaagagccaatgtgcccgattggcatgaacaaactctggagtggctacagc
ctcctgtactttgagggacaagagaaagcacacaaccaggacctagggctggctggctca
tgcttggctcgtttcagtacaatgccattcctctactgtaaccctggggatatttgttat
tatgcaaatcgaaatgacaaatcctactggctctcaactacagcacctcttccaatgatg
cctgtggcagaagaagaaattaggccatatatcagccgctgctctgtgtgtgaggcccca
gctgtggcaattgctgtccatagccaagaagcttctattcctcgctgccctgaaggctgg
cgcagtttatggattggatattccttccttatgcacactgcggctggtgatgaaggcgga
ggacagtcgctggtctctcctgggagctgcctggaagatttcagggctactcctttcatc
gagtgcaatggggcccgtggaacctgtcattactttgccaataagtacagcttctggctc
actacgattgaccagcccttccaaagcaagccatcggcagacacactcaaggcaggactc
atccgaagccacatcagcagatgtcaagtctgtatgaaaaatttatag
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integrated database retrieval system
