Gallus gallus (chicken): 418940
Help
Entry
418940 CDS
T01006
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
gga
Gallus gallus (chicken)
Pathway
gga04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
418940 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gga04131
]
418940 (SPATA13)
Membrane trafficking [BR:
gga04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
418940 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
418940
NCBI-ProteinID:
XP_015134594
CGNC:
66327
Ensembl:
ENSGALG00000034674
LinkDB
All DBs
Position
1:178578943..178727840
Genome browser
AA seq
1391 aa
AA seq
DB search
MGRAVLTLTQLFLPPSLGAAAPGQHRRAGSLEEVAAPLLSSVPCALSGCFWGKDLSVLHF
RLVRREAVQPEELSSAGERGSKRSSSAADVGQAARAAAGDGGVAVSCPSLQLHAYSIEGM
TTFQNGCGNSNAIACIVMDNKEAPNLTTSVSHNGGYSTGGGCEEETQDEKISPSKIMRFF
STPRKRANSSSDRPRSLILMGNSSTWNALSSIRKMGSFKKLKSSVLQGIQARECPDILNE
NGVGKHSSNGAVVRVQTNRYSYSGPLQDFQSAVDGLASDCSDAEESDESFLRNTHRSRSI
RRAYGAGRINLLDTDKAQSHHNGTRPTSPVLAEPKICEILVKDSENNRIIYRRSKSSDNL
NFLKKSSFKRKSTSNLTDLKAANEKQMPARTVSVTSADSDKTNGNPERRSKRWKSPIRAK
DFDRVLKLVSNVTDVAWKKDGPKSAAPSPSEQSQRTRSNSRLHDDYSRRVSSSTDHDRKR
CTSSASSLDSSSPGTPCLQSPVAAQDKEAEMNVARAEDKNLRTSSGIAESDSLSPTLSDI
GPFPNEVFDTDSDEPKAPQQFVCDAEHPHIPVRPTAPKPQSPNTEKVMCNMDFQCSNHHS
TLSLSSTESEERGEVGSKLGRNPVCFQDAVQTVYYDDGNEDSGISSHSQLSLNLAPGAEE
KKEEVVSDDHWKKSPSQDEEKTDTQRVTPRRWGSGKRSRPRPLSDYGQMSIRSISIPEDA
VAVESQKTDCTDGENQPGLASVGSVIQSNTVGYSRGRKRRPISVIGGVNFYGSGPAEEIE
GLLTQPTTRPPVPAHQVPPYKAVSARFRPLTFSQSTPIGLDRVGRRRQMRTSNAAADGGT
ESSALVDDNGSEEDYSYEELCQATPRYLQPGGEQLAINELISDGSIVYAEALWDHVTMDD
QELGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEELPENCNSIQDEEQD
ADISKHRQKIAENKDQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTTAQLS
TIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPSACI
ELSKLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSD
YNNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIVDWEGPDVLARSSELIHSGELT
KISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRIDMDEMELVDTEDGRDKDFNIN
VKNAFKIINRATEEVHLFCAKKQEDKKRWMEACESERRRVREDKEMGMEISENQKKQAMQ
NARKSRHGKMKGVSYNGCPVPPLHQSLHPIHQRHITVPTSIPQQQVFALAEPKRKPSLFW
HTFNKLTPFKK
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtgcggtgctgacactcacgcagctgtttctcccacccagcctgggggctgcg
gctcctgggcagcacagaagggctgggagtttggaggaagtcgcagcacctctgctgtcc
tctgtgccgtgtgctctgtccggctgtttctgggggaaagatttgtctgtgctgcacttt
cgactggtccgcagggaggcggtgcagccggaggagctcagctcagctggtgaacgtggg
agcaagaggagctcgagtgcagcagatgtgggccaggcagcgagggcagctgctggggac
ggcggtgtggctgtgagctgccccagcctccagctccatgcctacagcatcgagggcatg
accacatttcagaatggctgtgggaacagcaacgccatcgcttgtatcgtgatggataat
aaggaggctccgaacctgacgacctctgtcagtcataatggggggtacagcaccggtggc
ggttgtgaagaggaaacacaggatgagaaaatcagcccttccaaaatcatgcgcttcttc
tccacccctcggaaacgagcgaattccagctctgacaggcctcgctctctcattttgatg
ggcaactcttccacgtggaatgctttatcttccatcaggaaaatggggtctttcaagaag
ctgaaatcatctgttctgcaagggattcaagcaagggagtgccccgatatcctaaatgag
aacggtgtaggcaaacacagttcaaatggggcagtggtgagagttcagactaacaggtat
tcctattcggggcctttgcaggatttccagagtgcagtggatggtttggcgtccgactgt
tctgatgctgaggaaagcgatgagtccttcctgaggaacacgcaccgctcacgcagcatc
cgacgggcttatggtgccggccgcatcaacctgctcgacacggataaggctcagagccac
cacaacggcaccaggccaacatctccggtcctcgcagagccaaagatctgtgagattttg
gtgaaggactctgaaaacaacaggatcatctatcggagaagcaaaagttcggataatttg
aactttctgaagaaaagctccttcaaacggaagtccacctcaaaccttaccgacctcaag
gccgcgaatgaaaaacaaatgccagcaaggactgtgagcgttacttctgccgactcagac
aaaacaaatgggaaccccgagaggagatccaagcgatggaagagccccatcagggcaaag
gattttgaccgagttctgaagcttgtcagtaacgttacagacgttgcgtggaagaaggat
ggccctaagagcgcggctccttctcccagcgagcagtcccagagaacaaggtcaaacagc
agactgcatgatgactactcccgcagggtttccagtagcacggatcatgacagaaagagg
tgcacctcctcagcgtctagtctagattcttcttcaccgggaacaccttgtctacaaagc
cctgtggctgctcaggataaagaggctgaaatgaatgtagctcgtgctgaagacaaaaac
ctcaggacatcttcgggtatcgcagaatccgatagcttgtcccctactctgagtgacatc
gggccatttcccaacgaagtgtttgatacggactcggatgaaccgaaagccccccagcag
tttgtatgtgatgctgaacatcctcacatccctgtcaggccgactgctccaaaacctcaa
agccccaacacggagaaagtgatgtgcaatatggatttccagtgctcaaaccatcatagc
acactgtcgctgagctccacggagagtgaggagagaggtgaggttgggtcaaagctgggc
aggaatcccgtctgcttccaggacgctgtgcaaaccgtgtactatgatgatggaaatgaa
gacagtggcatcagcagtcactctcagctgagcctcaatttagcccctggtgcagaagaa
aaaaaggaagaggttgtttctgatgaccattggaagaagtccccatcccaggatgaagaa
aagacagacacgcaaagggtcacgcccaggagatggggctctggaaaaaggtctcggccc
agaccactctcagactatggccaaatgtcaatcagaagtatctccatacctgaagatgca
gttgctgtggagtcacagaagacagactgcacggatggagaaaatcagccaggactggct
tctgttgggtctgtgatccaaagcaatacagtaggctactccagagggcgaaaaagaaga
cccatctctgtaataggtggggtcaatttctatggaagcggtccggcagaagaaattgaa
ggtctgctgacacaacccaccacgcggccgcccgtcccggcacaccaggtgcccccctac
aaagctgtctctgccaggttccggcccctcaccttttcacagagcactcccattggcctg
gaccgcgttgggcgacggcggcagatgagaacatctaatgctgctgcagatggcgggact
gaatcttcggcattggtggatgacaatggcagcgaggaagattacagctatgaggagctc
tgccaagccacaccgaggtacctgcagcctggaggggaacagctcgccattaatgagctg
ataagcgatggcagcattgtctatgcagaagctctctgggaccatgtcactatggatgat
caagagctgggcttcaaagctggagatgtcattagagtcttggaagcttccaacaaagac
tggtggtggggaagaaatgaggacaaagaagcctggtttccagctagctttgtcaggctg
cgagttaatcaggaagaactgccagaaaattgcaatagtatccaggatgaagaacaagac
gcagatattagcaagcatcgtcagaagatagctgagaacaaggatcagatgagaaccaac
gttatacaggaaatcatgaacacagaacgagtctatatcaagcatctcaaggacatctgt
gagggttacattcggcagtgtcgcaaacatacaggaatgttcaccacggcccagctaagc
accatttttggaaatattgaggatatttacaaattccaaagaaagtttctgaaggatctt
gagaaacagtacaacaaagaggaacctcatctgagtgagatagggtcatgctttctccaa
catcaagaaggctttgctatttattcagagtattgtaacaatcatcccagtgcctgcatt
gaactttccaaactaatgaaacagggcaaataccgtcacttctttgaggcctgtcgcttg
cttcagcagatgattgacattgccattgatggttttcttctcacacctgttcagaaaatc
tgcaaataccctctgcagcttgcagaactgctcaaatacaccacgcaggagcacagtgat
tataacaacataaaagctgcttatgaggctatgaagaatgtggcatgcctaatcaatgag
cgaaaacgaagattggaaagcatagacaagattgcgcgttggcaagtgtctatagtagat
tgggagggaccagatgtgttagccagaagctcggaactgatccactcaggagaactgacc
aaaatatcaaagcaaggcaaaagccagcagaggactttcttcctctttgaccatcaactt
gtgttctgtaagaaggacctactgagaagggacatcttgtattataaggatcgtatcgac
atggatgagatggaacttgtggacactgaggatggcagagacaaagactttaacattaat
gttaagaatgcttttaagataataaacagagcaacagaagaggttcatttgttctgtgca
aaaaagcaagaggataagaagagatggatggaggcgtgtgaaagtgaaaggagaagagtt
cgagaagataaggaaatgggaatggaaatctcagaaaaccagaagaagcaagccatgcag
aacgcccgtaaatcaaggcatgggaaaatgaaaggtgtgagctataatgggtgtcctgtg
cctcctctacaccagagcttgcatcccatccatcagcgccacatcaccgtgcccaccagc
atcccacagcagcaggtctttgccctggcagaacccaagcggaagccatccctcttctgg
cataccttcaacaaactcaccccgttcaaaaagtga
DBGET
integrated database retrieval system
