Gallus gallus (chicken): 419125
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Entry
419125 CDS
T01006
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
gga
Gallus gallus (chicken)
Pathway
gga03250
Viral life cycle - HIV-1
gga04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
419125 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
419125 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gga03400
]
419125 (SAMHD1)
DNA repair and recombination proteins [BR:
gga03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
419125 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
419125
NCBI-ProteinID:
NP_001026016
CGNC:
839
Ensembl:
ENSGALG00000001231
UniProt:
Q5ZJL9
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Position
20:complement(630014..655765)
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AA seq
614 aa
AA seq
DB search
MGSPAAGWGAAPAKRARREGSAESSCGSPADRDPRLWDTERLCQHLSRNGVGEPGLLRRF
RESGVTGAMLLDLPACALRITHACLPDERLEVLACLNQLRQTADIMKVFNDPVHGHIEIH
PLLVRIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSLGVGYLAGCLVRELKERQPEL
DITQRDILCVEIAGLCHDLGHGPFSHMFDGRFIPLARQGLNWKHETASVEMFEHLITSNK
LEEIMESYGLILEEDIAFIKEQIGGPIDETACEESWPYRGRPKEKSFLYEIVANKKNGID
VDKWDYFARDCHHLGIQNNFDYRRLIKFTRVCEAGNQKHICARDKEVGNLYDMFHTRNCL
HRRAYQHKVGNIIEIMITEAFQKADCFFQIEGSKGKLYHISTAMEDMEAYTKLTDNIYLE
ILHSSRPELSEAREILHKIERRELYKFLGETQPEKVNEIPKDEYDGLAGDIANSKPEKDP
PDVELTAEDFIVDVVNMDYGMKDQNPIDNVLFYCKADPSKAIKVSKEQVSRLLPGTFSEQ
VIRVYCKRQDPIIVSAAKQYFVQWCIKRDFTKPQDGDVVAPHLTPLKQSWNNRSKTEYTT
ASEPSCKQKLSFNK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcccggcggcgggttggggcgcggctcccgccaagcgcgcgcggcgggagggc
tccgccgagagctcctgcggctccccggccgaccgcgacccgcggctgtgggacacggag
cggctctgccagcacctctcgcgcaacggcgtgggcgagcccggcctgctgcgccgcttc
cgagagagcggcgtcaccggggccatgctgctcgacctgcccgcctgcgcgctgcggatc
acccacgcctgcctcccagatgagagactggaagtgctcgcctgcctgaaccagctgaga
cagacagcagacatcatgaaggtttttaatgatccagttcatgggcacattgagatacac
cctcttcttgttcgcatcattgacacgcctcagtttcagcgcctgcgatacattaagcag
ctgggtggcacttactttgtttttccaggagcctctcacaaccggttcgaacactcctta
ggggtgggctaccttgcaggatgtctggttcgtgaactgaaggagcggcaaccagaactg
gatataacccaacgagacatcctctgtgtggaaattgctgggctttgtcatgatctgggt
catgggccgttttcacacatgtttgatgggagatttattccgcttgctcgtcaaggtttg
aactggaagcatgaaactgcttctgttgaaatgtttgagcacctgatcacatccaacaaa
ctggaagaaatcatggaatcgtatggtctcatcctggaggaggacatagccttcatcaag
gaacagataggaggccctatagatgagacagcttgtgaggagtcgtggccctaccgagga
cggccaaaggagaagagtttcctatatgagatagtagccaacaagaagaatggcattgac
gtggacaaatgggattattttgcaagggattgccaccacctagggatccagaataatttt
gattataggcgcttaattaaattcactcgtgtttgcgaagcaggaaaccagaagcatatc
tgtgcccgtgataaggaagttgggaatttgtatgatatgttccacactcggaattgcctg
caccggcgagcgtaccagcataaggttggcaacatcattgagataatgattacagaagcc
tttcaaaaagcagactgtttttttcaaatagaaggctctaaaggaaaattgtaccacatc
tctacagcgatggaggacatggaagcctacactaagctaactgataatatctacctggaa
attctgcactcaagtcgtccagaactgagtgaggcacgagaaattttgcataaaatagaa
cggcgtgaattatacaagtttttaggagagactcaacccgaaaaagtgaatgaaattcca
aaggatgaatacgatggcctggcaggggacattgctaactccaagccagaaaaagatcct
ccagatgtggagctgactgctgaagacttcatagttgatgttgtcaatatggattatgga
atgaaagatcagaaccctattgataatgttctcttctactgcaaggctgacccgtccaag
gccatcaaggtcagtaaagaacaggtttcaaggcttttaccagggaccttttcagagcag
gttatccgggtttactgcaaacgtcaggatccaattattgtttcagctgcaaagcagtat
tttgttcagtggtgtataaagagggatttcaccaaaccacaggatggtgatgtggttgcc
cctcatctaactccactgaaacaaagctggaataacagaagcaagactgaatacacgaca
gcttcagaacccagctgcaagcagaagctctctttcaataagtaa
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