Gallus gallus (chicken): 419331
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Entry
419331 CDS
T01006
Symbol
CSTF1
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
gga
Gallus gallus (chicken)
Pathway
gga03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
419331 (CSTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
419331 (CSTF1)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
419331 (CSTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
CSTF1_dimer
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_VPS8
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_DCAF12
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_2nd
VPS8_N
PROPPIN
Beta-prop_WDR11_1st
Beta-prop_HPS5
Frtz
DUF7099
Motif
Other DBs
NCBI-GeneID:
419331
NCBI-ProteinID:
XP_024998199
CGNC:
5864
Ensembl:
ENSGALG00000007757
LinkDB
All DBs
Position
20:complement(12011422..12018869)
Genome browser
AA seq
487 aa
AA seq
DB search
MQQPSRRSILRSRPPPPPPPLPPPPIDALRAPVAILGGERGRQKEGSAPPRHSLLTMYRT
KVSLKDRQQLYKLIISQLLYDGYINIANGLINEIKPQSVCAPSEQLLHLIKLGMENDDSA
VQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDGQLIA
TGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLAFHPT
EQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPTLRLY
DINTFQCFVSCNPQDQHIDAICSVNYNASANMYVTGSKDGCIKLWDGVSNRCITTFEKAH
DGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVKYTGAGLSGRQVHRTQAVFNHT
EDYVLLPDERTISLCCWDSRTAERRNLLSLGHNSIVRCIVHSPTNPGFMTCSDDYRARFW
YRRSTTD
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccttcgcggaggagcattcttcggtctcggccgccgccgccgcctcctccc
ttaccgccgccgccaatcgatgcgctcagggctccggtcgccattttagggggagagcga
gggaggcagaaggaagggtcggcccctccaaggcattctttgctcacaatgtataggaca
aaagtcagcttgaaagatcgtcagcaactttataaactaataattagtcagctactgtat
gatggatacataaatattgctaatggcttaataaatgagattaaaccacaatccgtttgt
gcgccatctgaacaactgctgcatcttattaaattagggatggagaatgatgacagtgct
gttcaatatgcaattggacggtcagatacagtagctccaggcacaggaatcgacttagaa
tttgatgcagatgtacagaccatgtctcctgaggcctctgagtatgagacttgttatgtc
acctctcataagggaccgtgtcgtgtagcaacatatagcagagatggacagctaatagct
acaggatctgccgatgcctcaataaaaattcttgatacagagagaatgctggccaaaagc
gctatgcctattgaggttatgatgaatgagacagcacagcaaaacatggaaaatcaccct
gttattcggactttgtatgatcatgtggatgaggttacatgtttagcttttcatcctaca
gaacagatcctagcatctggttcaagggactacacacttaaattgtttgactattcaaaa
ccttctgccaaaagagccttcaaatacatacaggaagcagagatgttgcgctcaatctct
ttccatccttctggagatttcatacttgtgggtacccagcaccctactttgcgactctat
gatatcaatactttccagtgtttcgtgtcttgcaatcctcaagatcagcacatcgatgcc
atttgttcagtaaattacaacgcaagcgcaaacatgtatgtgacgggaagtaaggatgga
tgcatcaaactgtgggatggtgtttcaaatcgctgcatcactacttttgagaaggcacat
gatggagctgaagtctgttctgctattttttccaaaaattcaaagtatatcttgtcaagt
ggaaaagactctgtagctaaactgtgggagatatctactggtcggacgctggtcaagtac
acaggagctggtttgagtgggcgtcaagtacacaggacacaagcagtcttcaaccacaca
gaagactacgtgctgctgccggatgaaaggaccataagtctctgctgctgggattcgaga
actgctgagcgaaggaatctcctttctcttgggcacaacagcatcgtccgctgtattgtc
cattctcctaccaaccctggcttcatgacctgcagtgacgactacagagctagattttgg
tacagaaggtcaacaacagactaa
DBGET
integrated database retrieval system
