Gallus gallus (chicken): 419377 Help Entry 419377            CDS       T01006                                  Symbol NPHP4 Name (RefSeq) nephrocystin-4 isoform X1   KO K16478   nephrocystin-4 Organism gga  Gallus gallus (chicken) Brite KEGG Orthology (KO) [BR:gga00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:gga03037]     419377 (NPHP4) Cilium and associated proteins [BR:gga03037]  Primary cilia and associated proteins   Nephronophthisis-related proteins    419377 (NPHP4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TBX2-3_RD Motif Other DBs NCBI-GeneID:  419377 NCBI-ProteinID:  XP_003642568 CGNC:  640 LinkDB All DBs Position 21:692638..714584 Genome browser AA seq 1384 aa AA seqDB search MAEWERLFAQSRAVPPHAQRRHGVPERSVPFQCVLKCLEGSVVKQRSPAELQLRLSLFDA AHRHFFGHTWHSSTRTPCSAPGQPPRVLFNEAVYFHTSLSHPSITAVVEVVAVAPTPEGL SRDVSCGFGLIPLFDSRREPSDLAAKGRALKLYHGTPRALLHPLLQDPLEKNKYVTIMEN SHLEYTLKPHLPLEKIFHLLPENLLVSGLQKIPGLLPAHGDTGDAFLKPRLMGTTPCYLD QLCVRLHPSLEEFEEGLLEQLSSDRLLKQEVGSTLCVQERRLRVGVHNGLRFVQAPQVAV LQPAAEVARGQSTNPTDSAAEQALLLRSRLQLSEMVLHPAFGVCFQLEYVVCAAAKAAAG SALGPAAAMHTVRWALWSPFLGATSSPVLLSLRGGAHPSPGQTLVYRNPADSESSQQVKR IASGCVQFHVSTDAEHGVTSTDVSSKAGKELQEPPTPSLSLRSPLRPVASTQGPGLSLSQ LLASPQGRDERAVSRGRSAPMPRPCSTQRDGCTEHTAGITHLEADLCSGSPHVDASSGEH LWELPFAPTQPPITAVGPPAGSTALSRASLALLHSSGFPEILDGNKEPVELTEPLDPACF SPRLEEVDALQSNEIILQFLAFSRAPQDAVEGIWPTTVFLTFQFYRFPAVTTQRLQLLDV DGERAAGAAVPAQVLLQLNKDGTPSTGAPGLQLRYVVDPTFLRPGEQRVFVHYLAEHSLQ VDIWDGDSLLLVGSAAVKLKPLLRQGRPAVRTLHELEVATTEYEQDAPPAAGRDVLRPLG VRMAVRGHLHLCLANIGHRCEETPVSPRHPSLSHTHLVPSQGSGCLQSHHAGGDVRVSRA RRLAEVDGELAAILRSHRLEQSPDPLHAPHEAAAVQQRKLRCLAVVQQQKDAGWRIPQRM GWCEQRMQYLQVIDAYRERTKRRCISQLLSQAITITHTVYAMLGTAEFFEFALKNPYSVQ HTVTVEVDHPELSVIVDPREWRHFKELTQTATPLEEDMFHLRDDLRPQVYLRPKETVHIP FRYQTFSAEPAVAAVLGPVGLSKDEDAGRMQEEPRAAQMRPIQVAFRVSGGKPIALLQVK VEPRPHVVDQTFRFYHPELTFLKKAIRLPPRHTLPGALAGMQGNEPEVYVRCSDPNVICE TKNMGPGEPQDVFLKVAGGPSPQIKTFFVAIYTDPWLAAPLRIWQFHLHSLQRLDVSCTA GQLSRLAVPLRGTRTLRRVKAFCSHPHELKVDPAGVFILPPNGVLDLFVGVRPRRAGSRF LYLNLVDVECHQLLSSWLLCITCRQPLISKAFEITIPAGSGKGSNKRITYTNPYPTRRLY FLVTSRPDLLQFKEDSFEVAGGEVYTIGLRFAPSQSVGEEEILIHINDHEDKNEETFCVK VIYY NT seq 4155 nt NT seq  +upstreamnt  +downstreamnt atggccgagtgggagcggctgtttgcacagagccgtgctgtcccacctcatgcccagcgc agacacggcgtgccggagcgctccgtgcctttccagtgcgtcctgaagtgcctcgagggt tccgttgtcaagcagaggtccccagctgagctgcagctccggctgtccctctttgatgct gcccaccgccacttctttggccacacgtggcacagcagcacccggaccccctgcagcgcc ccagggcagcccccccgtgtgctcttcaatgaggctgtgtacttccacacctcgctcagc caccccagcatcacggccgtggtggaggtggtggctgtggctcctaccccagaagggctc tcacgggacgtgtcgtgtggctttgggctcatcccactgttcgacagcaggcgggagccc tcagacctggctgccaagggcagagcgctcaagctgtaccacgggacaccacgtgcctta ctgcacccgcttctccaggaccctctagaaaagaataaatacgtgactataatggagaac agccacctggagtacaccctgaagccccacctgcctctggagaagatatttcacctcctt cctgaaaacctgctggtgtctggcctacagaagatccctggcctgctgcctgcacatggg gacacaggtgatgctttcctgaagccacggctcatggggacgaccccctgctacctggac cagctctgcgtccgcctgcacccttctctggaggagtttgaggaagggctgctggagcag ctgagcagcgaccgcttgctgaagcaggaggttggcagcacgctgtgcgtgcaggagcgg cggctgcgtgttggtgtgcacaatgggctgcgcttcgtccaggccccgcaggtggccgtc ctgcagccagcagctgaggtggcccggggacaaagcaccaaccccacggacagcgctgca gagcaggcactgctgctgcggagccgcctgcagctgagtgagatggttctgcacccggcc ttcggggtctgcttccagctggagtacgttgtctgtgctgcagccaaggctgcagctggc agtgcgttgggcccagcagccgccatgcacacggtgcgctgggcgctttggagccccttc ctgggtgccacctcctccccggtgctgctgtccctgcgtggcggcgcccatcccagcccc ggccagaccctggtgtacagaaaccctgcagacagcgagagctcccagcaggtgaagcgc atcgcgtcgggctgcgtccaattccacgtttccaccgatgcagaacacggtgtgacttct acagacgtctcgagtaaagctgggaaggagctgcaggagcctcctacgccatcgctgagt ctgcgctccccactgcgcccggtggcctccacgcagggaccagggctgtccctctcacag ctgctggcctcaccgcagggcagggatgagcgcgctgtgtcgcgtggccgcagtgcccca atgccccgaccctgcagcacacagagggatggctgcaccgagcacactgctggcatcaca cacctggaggctgacctgtgctcgggctccccacacgtggatgcctccagcggggagcac ctgtgggagctgccctttgcgccgacacagccgcccatcacggccgtggggccgcctgct gggagcactgcactcagccgtgcctcactggcgctcctgcacagctctggcttcccggag atcctggatggcaacaaggagcccgtggagctcacggagccgctggaccctgcgtgcttc agtcctcggctggaggaagtggatgctctgcaaagcaatgagataatcctgcagttcctt gcgttcagtagggctcctcaggatgcagtggaagggatatggccgacgacggtgttcctc accttccagttctaccgcttcccagcggtcaccacgcagcggctgcagctgctcgatgtg gatggcgagagggcagctggggctgctgtgccagcacaagtgctgctccagctgaacaag gatgggaccccgagcactggagccccagggctgcagctgaggtatgtggtggaccccacc ttcctgaggcctggggagcagcgtgtcttcgtgcactacctggctgagcacagcctgcag gtggacatctgggatggggactcactgctgctggtcggctctgctgcagttaaactgaag cccctgctgcgccagggccggccggctgtcaggacactgcatgagctggaggtggccacc actgagtacgagcaggatgcgccaccagcagcaggcagggatgtgctgcggcccctgggt gtccgcatggccgtgcggggccacctgcacctctgcctggccaacattggtcaccgctgc gaggagacccctgtgagccccagacacccatcgctgtcccacacccaccttgtgccctct cagggcagtggctgtttgcagtcccatcacgctggtggggatgtcagggtatctcgggca cgcaggctggctgaggtggatggtgagctggcagccatactgcgcagccaccggctggag cagagcccagaccccctgcatgcaccccatgaggccgcagccgtccagcagcgcaagctg cggtgcctggcagtggtgcagcagcagaaggatgctggctggaggatcccacagcgcatg ggctggtgtgagcagcgcatgcagtacctgcaggtcatcgatgcctaccgggagcgcacc aagcgccggtgtatctcccagctgctcagccaggccatcaccatcacccacaccgtgtac gccatgctggggacggctgagttctttgagtttgccctgaagaacccttacagtgtccag cacacggtgacggttgaggttgaccaccccgagctcagtgtcatagtggacccaagggag tggcggcacttcaaggagctgacccagacagccaccccgctggaggaggacatgttccac ctgcgggatgacctcaggccccaggtctacctgcgccccaaggagaccgtgcacataccc ttccgataccagacgttctctgcagagccggctgtcgcagcagtgctggggccggtgggg ctgagcaaggacgaggatgcagggaggatgcaggaggagccaagggctgcgcagatgagg cccatccaggtggcttttcgtgtgagtgggggcaaacccatcgcgctgctgcaggtgaag gttgagccccggccccacgtggtggatcagaccttccgcttctaccaccccgagctgacc ttcctgaagaaggccatccgcctgcctccacggcacacgctcccaggtgccctggcgggg atgcagggcaatgagcccgaggtctacgtccgctgcagcgaccccaatgtgatctgtgag accaaaaacatgggtcctggggaaccacaggacgtcttcttaaaagtagctggaggaccg agcccgcagatcaaaaccttctttgttgctatttatacggacccctggctggccgcaccg ctgcgcatctggcagttccacctgcattccctgcagcgtttggatgtcagctgcactgca gggcagctctcccgcctggccgtcccgctgcgcggcacccgcaccctgcgcagggtgaag gcgttctgctcccacccccacgagctgaaggtggacccagcaggtgtgttcatcctgccc cccaatggtgtcctggatctgtttgtgggcgtgaggccgcgccgggccggcagcagattc ctctacctcaacctggtggacgtggagtgccaccaactgctgtcctcctggctgctctgc atcacctgccgacagccactcatttccaaggcctttgagatcaccatccctgcgggcagt gggaagggctccaacaagcgcatcacctacaccaacccctaccccacacgcaggctgtac tttctggtcaccagccggcccgacttgctgcagttcaaggaggactccttcgaggttgct ggtggggaggtgtacaccatcgggctgcgcttcgccccgagtcagagcgtgggtgaggag gagatcctgatccacatcaacgaccacgaagacaagaacgaggagaccttctgcgtgaag gtcatctactactga

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