Gallus gallus (chicken): 419454
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Entry
419454 CDS
T01006
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
gga
Gallus gallus (chicken)
Pathway
gga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
419454 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
419454 (EXOSC10)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
419454 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
419454
NCBI-ProteinID:
NP_001012748
CGNC:
2237
Ensembl:
ENSGALG00000003086
LinkDB
All DBs
Position
21:complement(4114538..4128664)
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AA seq
910 aa
AA seq
DB search
MAAAVGEGKGCAAVGTPAAQGARGDSGGLPAEPEREGNPAAALVLPGFDDVDAFVKHALG
TMVATTKASSGLPQPGDEYDFYRSFPGFRAYCEAQGQRLLHCMSRVMQYHGCRSHMRDHS
KVTELEDKFDMLVDSNDIILERVGILLDEAAGVNKNQQPVLPAGLQVPQTIVSSWNRKAG
EYHKRTKSETFRLLHAKNISRPQLKFREKIDNSNTPFVPKLFIKPNALKPLPEALTKSGR
ERKERPEDLDVPAALADFIHQQRTQQTEQDMFAHPYQYELEHFSPPDGVLKKPEPQMYRP
IKETPCHFITTLDELVELNEKLMNCKEFALDLEHHSYRSFLGLTCLMQISTRTEDFIIDT
LELRSDMSILNETFTDPAIVKVLHGADSDVEWLQKDFGLYLVNMFDTHQAARLLNLGKHS
LDHLLKLYCSVDADKQYQLADWRIRPLPEEMIQYARDDTHYLLYIYDKMREALWERGNEQ
PTQLKVVWQRSRDICLKKYIKPLFSDESYLELYRRQKKHLNTQQLAAFRLLFSWRDKTAR
QEDESIGYVLPNHMLLKIAEELPKEPQGIIACCNPVPPLVRQQINELHLLIQQAREMPLL
KSEIALTVKKRTSLSNPERLENTFFGPHDSSRIPMDDFHNNSALESTSAPVLERDSLFSD
NERTMNIQSVQPESACLVATATVSIFSECDKDEGNEKVLTTAQKKAQRIMESFENPFRMY
LPSEQNPAYVSQSAKFDPSSKIYEISNRWKLMSKTQVQKESRDEAKKKAAQQSAARDQAQ
KAYKEATENIVSVRQQAMQEQANRKRERVMSETGTELPKPEKKRPKASQQPEELEAPKQF
TPFDYSKFNFKVFAGSSKSKQSVQFDPARQVYTGKKFAGANKLQQPAGNRSMSYLAGKAD
RGSKHHWPKR
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgtcggcgagggaaaaggctgcgcggccgtggggacgcccgcggcccaa
ggggctagaggggattcgggggggctgcccgcggagccggaaagagaggggaaccccgcc
gcggcgctggtgctgcccggcttcgacgacgtcgacgccttcgtcaagcatgccctcggc
accatggtggccaccacgaaggcatccagtgggctccctcagcccggcgatgagtacgac
ttctaccgcagcttccctgggttccgggcgtactgcgaggcgcagggccagcgcctcctg
cactgcatgagcagggtgatgcaatatcacggctgccgcagccacatgagagatcacagc
aaagtcacggagctggaagataaatttgatatgctggttgactccaatgacatcattctt
gagagagtgggtattttactggatgaagcagcaggagtgaacaaaaaccagcagcctgtc
cttcctgctgggttgcaggtgccacagacaatcgtttccagctggaaccgcaaggcagga
gagtaccacaaaagaaccaagtctgaaaccttccggttgcttcacgccaagaatatctct
cgcccgcagcttaagtttcgggagaagattgacaattccaacactccctttgtacctaag
ctttttatcaagccaaatgctttgaaaccattgcctgaagccctcacaaaaagcggacgg
gaacgaaaggaacgccctgaggatttggatgtcccagctgctttggcagacttcatacac
cagcagaggacgcagcaaactgagcaagacatgtttgctcatccttaccagtacgaactg
gagcacttttctccaccagatggagttcttaagaagccagaaccccagatgtacagaccc
atcaaggaaacgccttgtcatttcatcaccacactggatgagctggtagaactaaacgag
aagctcatgaactgtaaagagtttgctctggacttagagcaccattcctaccggagtttc
ctgggcttgacatgtctgatgcagatttccactcgaactgaagacttcattattgacaca
ctggagctgcgcagtgacatgagcattctcaatgagaccttcacagacccagcaattgtg
aaggtcctgcacggtgctgattcagatgtggagtggctgcaaaaagactttggcctgtac
ttggtgaacatgtttgatactcaccaagctgctcgtcttctcaatcttggcaagcactct
ttggaccacttgctgaagctgtattgcagtgtggatgctgacaagcagtaccagttggct
gactggaggatacgccctttgccagaggaaatgattcagtatgcccgtgatgacactcac
tacttgctctacatttatgataagatgagggaggcactgtgggagagaggcaacgagcaa
cccactcagctgaaggttgtgtggcagcgcagcagagacatctgcctgaagaaatacatc
aagcccctcttttcggatgaatcctaccttgagctctacaggaggcagaaaaagcatctc
aacacacagcagctagcagcatttaggttgctgttttcatggagagacaagacagcacgt
caggaagatgagagtataggatacgtgttaccaaatcacatgttattgaagatagcagag
gagctgcccaaggaaccccagggtatcattgcttgctgcaatccagtcccaccactagtt
cgccagcagattaatgaattgcatcttctcattcagcaggcccgagagatgcctcttctc
aagtcggagattgctttgacagtcaagaaaaggacatctctctccaaccctgagaggctg
gagaataccttctttggaccacacgacagttcccggattcctatggatgattttcacaat
aattctgctttagaatctacatctgcaccagtcttggaacgtgattctctcttttcagac
aatgagaggacaatgaatattcagagtgttcagccagagtcagcatgccttgttgctact
gccactgtcagcatattcagtgaatgtgataaagatgaaggaaatgagaaggttttaaca
actgcacagaagaaagctcagcgtataatggagtcctttgagaatccatttagaatgtat
ttgccttcagaacagaatcctgcctatgtctcacagtctgcaaagtttgacccatcatca
aaaatttatgaaatcagcaatcgatggaagttgatgagtaagacacaagtacagaaggaa
tccagggatgaagcaaaaaagaaagcagcccagcagtcagctgctcgtgaccaggcccag
aaggcatacaaagaagcaacagaaaacattgtgtctgttcgtcagcaagctatgcaggaa
caagctaataggaagagggagagggtcatgagtgaaacaggaacagaactgccaaaacca
gagaagaaacggccaaaagcctcccagcaaccagaggagctggaagcaccgaagcagttt
accccctttgattacagcaagttcaacttcaaagtgtttgcgggaagcagcaaatcgaag
cagtccgtacagtttgatcctgccagacaagtttacacaggcaagaaatttgctggagct
aacaaacttcaacaaccggctggaaaccgaagcatgtcctacctggcagggaaagctgat
aggggttccaagcaccactggccaaagagatag
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