Gallus gallus (chicken): 419869
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Entry
419869 CDS
T01006
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gga03041
]
419869 (DDX20)
Enzymes [BR:
gga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
419869 (DDX20)
Spliceosome [BR:
gga03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
419869 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SiaC
AAA_30
AAA_22
AAA_19
CMS1
Motif
Other DBs
NCBI-GeneID:
419869
NCBI-ProteinID:
XP_417996
CGNC:
1040
Ensembl:
ENSGALG00000001504
UniProt:
F1P5C0
LinkDB
All DBs
Position
26:3285239..3291571
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AA seq
767 aa
AA seq
DB search
MAAPAEGRFRTRDVLLPGGPSDFGSLLLSPPVLAGLEAAGFHRPSPVQLKAIPLGRCGLD
LIVQAKSGTGKTCVFSTIALDALLLDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLE
CHVFIGGTPLSQDKVRLKKCHIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLEEGS
FQEQINWIYSSLPANKQMLAVSATYPESLANALTMYMREPTFVRLNPTDPSLIGLKQYYK
IVNSHPLPHKTFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISG
SMNQSQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPVDWETYMHRIGRAG
RFGTLGLSVTYCCRGEEENMMMKIAQKCNLQLLPLPEPIPPGMMDQFDDWEVEVKPVVYT
GASVNSDTVCLKPEEPVLQPVQNNSAEVPQPHSNLPVGNSSVEKPKNALEQKLVKKHTNS
AKVEKSSRNSKTSSCNTKQKNQVETVSRMAGQSNTEVPDEEALKRNLPRIPCLSSFKNQQ
NSPWNFSEFVEDYEYFIKEGLERDVEILRSFSGPGDQRELPRNGGIEWKEVECNRDTVAN
DVLSDDSDASYISRASSHGSENNSCFEAFSDRQAKNAVPTACQGLTGFCPTPGKLKELSQ
VPKQNQVKKKALKQNAKEKKKHSHQYPNPAPRKTGDDCSCGSWDDGVTGFPHEAWSYEDY
WKSYYQAWQNYYAAVSHFHYRRSYRHLMWMNAYVNSVYFQELLESGD
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgctgagggccggttccgcacgcgggacgtgctgctgcccggcggcccg
tctgacttcgggtcgctgctgctgtcgccgccggtgctggcgggactggaggcggctggg
ttccacaggccgtcgcccgtccagctgaaggccatcccgctggggcgctgcgggctggat
ctcatcgtgcaggccaagtccggcaccggtaaaacgtgcgtcttctccaccatcgctctg
gacgcgctgctgctggacagcccggccacgcaggttcttatcttggctcccacacgagag
atcgctgtacagattcacgctgttatcacaacgattgggataaaaatggaaggtttggaa
tgccatgtcttcattggaggtactcctttgagccaggacaaagtcagactaaagaaatgc
cacatagcagttggctctccaggtcgcataaaacagctcatagagttggactacttgaat
actgccagtatccggctcttcattcttgatgaagcagacaagcttctggaagaaggcagc
tttcaggaacaaatcaattggatttactcttctctgccagccaataaacagatgcttgct
gtttcagctacttaccctgaatcgttagctaatgctttgacaatgtacatgagagaacca
acgtttgtgaggttgaatcctactgatccaagtctcattgggttgaagcagtattacaaa
attgtgaattcccatccacttccacataaaacatttgaggaaaaaacccagcacctacaa
gagttgttcagcaagattccatttaatcaagcattagtcttctcaaatttgcatagcagg
gctcagcatctagctgaaatactgacatccagaggctttcctgctgagtgcatttcaggc
agcatgaatcaaagccagcggcttgatgctatggctaaactaaagcaattccattgtaga
gttctgatttccacagacttgacatctcgtggaatcgatgctgaaaaagtgaatctggtc
atcaatctggatgtccctgtagactgggaaacatacatgcatcgtattggcagagctggg
cgctttggaactttgggcttatctgtgacatactgctgccgtggagaggaagaaaatatg
atgatgaaaattgctcagaaatgtaacctgcagcttcttcctttacctgagcctattcct
cctggaatgatggatcagtttgacgactgggaggttgaagtcaaacctgttgtatacaca
ggtgcttctgtaaattctgacactgtgtgtcttaaaccagaagaaccagtacttcagcct
gtccaaaataattctgcagaggtacctcagcctcattctaaccttccagttggtaattct
tctgtagagaagccaaaaaatgctttggaacaaaagctggtgaaaaagcacacaaattct
gctaaggtggaaaaaagcagcagaaactccaaaacctccagctgcaatacaaagcagaag
aatcaagtagaaactgtctccagaatggctgggcagagtaacacagaggttccagatgag
gaagccttaaaaagaaatctgcccagaattccatgcttatcatctttcaaaaaccaacag
aacagtccctggaacttctcagagtttgttgaagattatgagtactttattaaagaaggg
ttggagagagatgttgaaattttaagaagcttttcaggcccaggagatcaacgtgaactc
cccagaaatggtggtatagagtggaaagaggtggaatgtaatagagacacggtagcaaat
gatgttctgtctgatgacagtgatgcttcatacatttcaagggcttcctctcacggtagt
gaaaataactcttgctttgaagcattttcagacaggcaggcaaaaaatgctgtccccact
gcctgtcagggtcttacaggcttctgtcccacaccagggaagctgaaggagctatcacaa
gtcccaaagcaaaatcaggtgaaaaagaaagctctgaaacaaaatgccaaagaaaagaaa
aaacattcccatcagtaccctaatcctgcaccaaggaaaactggagatgactgctcctgt
ggctcttgggatgatggtgttactggctttcctcatgaggcgtggagttacgaagactac
tggaaatcttactatcaagcatggcagaactactatgctgcagtttctcactttcactac
aggagaagttacaggcacttgatgtggatgaatgcttatgtcaactcagtctactttcag
gaactgctggaaagtggtgattaa
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