KEGG   Gallus gallus (chicken): 420128
Entry
420128            CDS       T01006                                 
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
gga  Gallus gallus (chicken)
Pathway
gga03018  RNA degradation
gga03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    420128 (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    420128 (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gga03019]
    420128 (LSM4)
   03041 Spliceosome [BR:gga03041]
    420128 (LSM4)
Messenger RNA biogenesis [BR:gga03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     420128 (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     420128 (LSM4)
Spliceosome [BR:gga03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    420128 (LSM4)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 420128
NCBI-ProteinID: XP_418245
CGNC: 2465
Ensembl: ENSGALG00000003385
LinkDB
Position
28:4068726..4075072
AA seq 138 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQQKQQKGRGVGGAGRGVFGGRGRGIP
GSGRGQQEKKPGRQSAKQ
NT seq 417 nt   +upstreamnt  +downstreamnt
atgctgcccctgtcgttgctgaagacggcgcagaaccaccccatgctggtggagctgaag
aatggagagacgtacaacgggcacctggtgagctgtgacaactggatgaacatcaacctg
cgggaggtcatctgcacctcacgggatggtgacaagttctggagaatgccggagtgttac
atccgtggcagcacaattaaataccttcggatccccgatgaaataattgacatggtgaaa
gaagaggtggtctccaagggcagaggccgtggtgggatgcaacagcagaagcaacagaaa
ggccgtggtgttggaggtgctggacgaggtgtgtttggtggccgtggccgaggaataccg
ggcagtggaagaggccagcaggaaaaaaagccaggcaggcaatcagcgaagcagtga

DBGET integrated database retrieval system