KEGG   Gallus gallus (chicken): 420427
Entry
420427            CDS       T01006                                 
Symbol
WDR48
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
gga  Gallus gallus (chicken)
Pathway
gga03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    420427 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gga03400]
    420427 (WDR48)
DNA repair and recombination proteins [BR:gga03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     420427 (WDR48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F WDR54 WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_HPS5 RAWUL WD40_like Nucleoporin_N Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 420427
NCBI-ProteinID: NP_001026135
CGNC: 4538
Ensembl: ENSGALG00000006052
UniProt: Q5F3K4
LinkDB
Position
2:complement(5355491..5379083)
AA seq 678 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVATTKSSVNKWTLKGIHNFRASGDYDNDCTNPIPPLCTQPDQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHIN
PMDEEENEINHAVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETES
MLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEH
VYEKIINLDNESQTTSSSNNEKAGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKH
FIWKSGGDLTLHYRQKST
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggcggcgcatcaccggcagaacacggcggggcggcggaaagtgcaggtctcctatgtg
attagagatgaggtggagaagtataaccgaaatggggtaaatgcacttcagctggatcca
gcgttaaatagactcttcacagcaggccgagactctattataaggatatggagtgtcaat
cagcacaagcaagacccttatattgcatctatggaacatcacacagattgggtaaatgat
attgtactctgctgcaatggtaaaacattgatatctgcttcttcagatactacagttaaa
gtgtggaacgcgcataaaggattttgcatgtcaacactaaggacacataaggattatgtg
aaagccttagcatatgcaaaagataaagaactggtagcatctgccgggctggacagacag
atattcctctgggatgtaaatactctaacagcactgactgcctcaaacaacactgtcaca
acttcttccctgagtgggaacaaagattctatctatagccttgcaatgaatcaaatggga
acagttattgtatcggggtccactgagaaggttctcagggtgtgggatccaagaacttgt
gcaaaactaatgaaactcaaagggcacacagacaatgtgaaagctttgctgctgaacaga
gatggtacccagtgtctttcaggcagttctgatgggactattcgtctgtggtcccttggg
cagcagagatgtatagccacatatcgagtccatgatgaaggtgtttgggctctgcaggtc
aatgaagcattcactcatgtttattcaggaggaagagacaggaagatttattgtacagat
ttacggaatcctgatattcgtgtgcttatctgtgaagaaaaggcaccagttcttaagatg
gaacttgatagatcagctgatcctcctccagcaatttgggttgcaacaactaagtcctct
gtgaataaatggactttgaagggaattcataattttagagcatctggggactatgataat
gattgtaccaatcctataccgcccctatgtacacagcctgaccaagttataaaaggaggt
gctagtatcattcagtgccacattcttaatgacaagagacacatattaaccaaagacaca
aataataatgtggcatactgggatgtcttaaaagcatgtaaagttgaagaccttggcaaa
gtcgattttgaagaggaaattaagaagagatttaaaatggtctatgtgccaaactggttc
tcagtagacttgaaaactgggatgctgacaattactttggatgaaagtgactgctttgca
gcctgggtttcagcaaaagatgctggattcagcagtccggatggttccgatccgaaattg
aaccttggagggcttctattgcaagcacttctggagtactggcctagaacacacatcaat
ccaatggacgaagaagaaaatgaaattaatcatgcagtgaatggtgagcaggagaacaga
gtccagaaaggaaatggctattttcaagtaccaccacatacaccagttatatttggtgag
gctggaggacgcactttgttcaggttattatgtcgggattcaggtggtgaaacggagtct
atgcttctgaatgagactgtgccacaatgggtgattgacatcactgtggataaaaatatg
cccaaattcaataagattcccttctacctccaacctcattcgtcttcaggggcaaaaact
ctaaaaaaagaccggctgtcagcaagtgatatgcttcaggtgagaaaagtgatggagcat
gtgtatgagaagatcataaacttggataatgagtctcagacaacaagctcttccaataat
gagaaagcaggagaacaagaaaaagaggaggacattgctgtgctcgcagaggagaaaatt
gaacttctttgccaggaccaggttttggatccgaatatggaccttcgaactgtaaagcac
ttcatctggaagagtggtggtgatctgactcttcattatcgccagaaatcaacgtga

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