Gallus gallus (chicken): 420554
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Entry
420554 CDS
T01006
Symbol
PEX1
Name
(RefSeq) peroxisome biogenesis factor 1 isoform X1
KO
K13338
peroxin-1
Organism
gga
Gallus gallus (chicken)
Pathway
gga04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
420554 (PEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gga04131
]
420554 (PEX1)
Membrane trafficking [BR:
gga04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
420554 (PEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_lid_3
AAA_16
AAA_14
nSTAND3
RuvB_N
DUF815
RNA_helicase
TIP49
AAA_5
AAA_28
AAA_33
AAA_22
ABC_tran
AAA_18
Sigma54_activat
AAA_29
NACHT
Sigma54_activ_2
AAA_2
AAA_19
AAA_7
ATPase
APS_kinase
CoaE
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
420554
NCBI-ProteinID:
XP_004939352
CGNC:
7155
Ensembl:
ENSGALG00000009410
UniProt:
A0A8V0XEE6
LinkDB
All DBs
Position
2:complement(22652717..22674966)
Genome browser
AA seq
1291 aa
AA seq
DB search
MWGSGNPGGGGAGVAAATVVLSGTRDCFLHLPAVLASHLHLQQGQAVKVSYGDEPIYLSW
MEIRHRGHRSENIAEMNRHLAEKLGIADGEQVFLEPCSHVSSCQQVEVEPLSADDWEILE
LHASSLEKHLLDQIRIVFPKAIFPVWVEHHTHIYIRIGTLMPAAPYGRLEPRTELLICPK
ARELEENIIDMPSTESDILLKSFVKNNMEQDETVKEPFATQPHLNPGVPEQSKADANVTF
GSNVLPNMWNFIGSIFSRSPEQKQKTLCDKDEMNTFKDKLLNLIHMDSIFRVCQSQPPSV
QNASAVHAFLKYSAVHIFPWNLEFTDLDPNAVVSYGKINELLSPRQRHQEAKQNLSSEKQ
KHLTSTQDKNNSNSIQASGEGSVVQIVWNGFEDLKSVIEYGNGGEALHVGRVWIPDGLRK
KLRIEMHSTVRIKSLESIPKIPISLRLQPKQNLHKDTREDDVKCAFSAWLKDSATEDLPW
IMTSTNCIHLHIKEGMEEFVLSVVDNMHTEEDKSENTFILSPSLLQRTNIQVLLHPLTQK
ADADSQLPMRDTDRNLPYKRLNHLGGVDKLGTSSFEHISHSLLGRPLSQKLAGIAVGLRS
GGVLLTGGKGSGKSTLAKAICKEAFDRLDAHVEVIDCKALRGKRLGNIRKNVEEAFLEAS
WRQPSIILLDDLDHIVGVPPTPEHENSPETVQSSRLAYVLKDLIKEVISLGSLIALIATS
QSEHALHPSLVSAQGTHIFQCFKCIQSPDQKQRCEMLCSVIKNKLNCDVKKFSDLDLQYV
AKETEGFVARDFTMLVDRAIHACISNQNAFQHGAELNLSTVDFQKALKDFTPLALRNVSL
HKPKDIGWDRIGGLKDVRQILMDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTGKTLLA
GVVARESGMNFISVKGPELLSKYIGASEQAVRDIFSRAQAAKPCIVFFDEFDSIAPRRGH
DNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDQS
SRCEILKALSHSLSLANDVDLEYLAAKTEHFTGADLKALLYNAQLEAIHNLSSGLTQDFG
SSSDSDFSLSSMVFLNHSSGSDDSAIDGEAAPEQSLISLDMSELLPEDSRSNMYRLYFGS
SYESELGNGTPSELSSLCLSGPNSITHDFTNISQRDTALSQPSMLRTVSQEDPLENNQEQ
QIEHLRTEITALKANYRSKNGEDSTLNQSVLAKNTLIITQSHLMTALEGIRPSISQDDWK
NFTELYDNFQNPKRKGQVGSAFRPGQKMTLA
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgtggggcagcggcaaccccggcggagggggcgctggagtcgccgcggcgacggtcgtg
ctgagcgggacccgggactgcttcctgcacctgcctgccgtgctggcctcgcacctccac
ctgcagcagggccaagctgtgaaagtatcctatggtgatgagcccatatacttgagctgg
atggaaataaggcatcgaggtcaccggagtgaaaatattgcagagatgaacaggcattta
gcagagaaactcggcattgcagatggagaacaggtattcctggagccctgttcacacgtc
tcctcctgccagcaagtagaagtggaacctctctcagcagatgattgggaaatactggaa
ctgcacgcttcctctcttgaaaagcatcttctggaccagatccgaattgtattcccaaaa
gccatctttcctgtatgggttgaacaccacactcacatttacatcagaattggtacactt
atgccagcggccccctatgggagattagaaccacgcacggagcttctgatatgccccaaa
gcacgtgagcttgaggaaaacatcatagatatgccttctacagaaagtgacatcttactc
aagagttttgtgaaaaataacatggagcaagatgaaactgtaaaggagccttttgccact
caacctcacttaaatccaggagtccctgaacagagtaaggctgatgcaaatgtgacgttt
ggctcaaatgttctcccaaatatgtggaatttcatagggagcattttctctcgttcacct
gaacagaaacaaaagactttgtgtgataaagatgaaatgaacaccttcaaagacaagctg
ctgaacttaattcacatggattccatttttagagtatgtcagtcccagcctcccagcgta
cagaatgcatcagccgttcatgcatttctgaaatacagtgctgttcatatttttccatgg
aatttagaatttactgatttggatccaaatgctgtagtatcttatgggaaaattaatgag
ctgctttcccccagacagcgtcatcaagaagcaaagcaaaatctgtcatctgaaaagcaa
aagcatttgactagtacacaagacaaaaataattccaatagcattcaagcgtccggtgag
ggatctgttgttcaaatcgtttggaatggatttgaagacctaaagagtgtcatagagtat
ggcaacggtggggaagccctacatgttggaagagtttggattccagatggcctgagaaaa
aagctacgtattgaaatgcattcaacggtccgcattaagtcacttgaatctattcctaaa
attcctatatctcttagactgcaacccaaacagaacttacataaagatacacgtgaagat
gatgttaaatgtgctttcagtgcttggctgaaggattctgccactgaggatcttccatgg
ataatgacaagcacgaactgtatacatctgcacattaaagaaggaatggaggagtttgtc
cttagtgtagtggataacatgcacactgaagaagataagtctgagaatacttttatactg
agtcccagtttgctgcaaaggactaatatacaagttctcttacatcctctaactcaaaaa
gctgatgctgacagccaactgcctatgcgtgatacagacagaaaccttccttacaaaaga
ctaaaccatttagggggagtggacaaattaggaacgtcttcttttgaacacataagccac
agtcttttgggtcgtcctttatctcaaaagctggctggtatcgctgtgggactgcgcagt
ggaggggtgcttctcacagggggaaagggaagtggaaaatcaactttagcaaaggccatc
tgcaaagaagcgtttgatagattggatgctcatgtagaagtaattgattgtaaagcttta
agaggaaaaagattaggaaacataaggaaaaatgtggaagaagcttttttagaggcatcg
tggagacaaccatccattattttactggacgatcttgatcacattgttggagtacctcct
acaccagagcatgagaacagccctgaaacagttcagagcagtagacttgcttatgttttg
aaagatttgataaaagaagttatttccttggggagtttgattgctttaattgctacaagt
cagtctgagcacgctctgcatccttccctggtttcagctcaaggaactcatatatttcag
tgtttcaaatgtatccagtcaccggatcagaagcaaagatgcgaaatgctctgttctgta
ataaaaaataaactgaactgtgatgtgaagaagttctctgatcttgatctccagtatgtt
gcaaaagaaacagaaggttttgttgctcgagattttactatgctggttgatcgtgccatt
catgcctgtatttctaaccagaatgcatttcaacatggcgcagaattgaatctgtccact
gtggattttcagaaagctctaaaagattttactccattagctctgagaaacgtcagcctc
cataaacctaaggacatcggctgggataggataggtggcttaaaagatgtgaggcaaata
ctcatggataccatcatgttacctgcaaagtatccagaattatttgcgaacctgcctata
cgacagagatcaggagtcttgctctatggagcacctggaacaggaaaaacactgttagca
ggagtagttgctcgagagagtggaatgaatttcatcagtgtcaaaggaccagagctgctc
agcaaatatattggagcaagtgagcaagcagtccgagatatctttagcagagctcaggca
gccaaaccttgcattgttttctttgatgagtttgattctattgcccctcgccgaggtcat
gacaacactggagttacagaccgagtggttaatcaactgttgactcagttggatggtgtg
gaaggtttacaaggtgtttatgtgctggctgctactagtcgcccagacttgattgatcct
gctttgttaagaccaggccgactggataagtgcctttactgtccacctccagatcagagt
tcacgctgcgaaatcttaaaagctctcagtcattctctgtccttggcaaatgatgtggac
cttgagtatttggctgcaaaaacagagcacttcacaggggctgacctaaaagctttatta
tacaacgctcaattggaggcaatacataatttaagctcaggtttaacacaggattttggt
tctagttctgatagtgacttcagtctgtcttccatggtttttctaaaccatagcagtggc
tcagatgactcagcaatagatggagaagcagcacctgagcaatctcttatttctttggac
atgtctgagttgcttccagaagattcaagatccaacatgtatcgtctttattttggaagc
tcttatgaatcagagctaggaaatggaactccttcagaactgagctctttgtgtttgtct
ggaccaaactctataactcatgattttaccaacatctctcaaagagacacagcattgtca
caaccttcaatgcttagaacagtctcccaagaagacccactggaaaataaccaggagcag
caaatagagcacctgaggacagaaatcactgctctcaaagccaattacagaagcaagaat
ggagaggacagcacccttaatcagtctgtgcttgccaagaacactttaattattacccaa
tcccatttgatgactgctcttgagggtataagaccatccattagccaagatgactggaag
aattttactgaactgtacgataattttcagaatcccaagaggaaaggacaagttgggtca
gcattcagaccaggacaaaaaatgactctagcatag
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integrated database retrieval system
