Gallus gallus (chicken): 420560
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Entry
420560 CDS
T01006
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gga04131
]
420560 (VPS50)
Membrane trafficking [BR:
gga04131
]
Protein recycling
Others
EARP complex
420560 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
420560
NCBI-ProteinID:
NP_001012872
CGNC:
7228
Ensembl:
ENSGALG00000009500
UniProt:
Q5ZKV9
LinkDB
All DBs
Position
2:22950158..23019350
Genome browser
AA seq
949 aa
AA seq
DB search
MQKIKSLMTRQGLRSPQESVHDLSPIENLRFPTKEELRESWEEPTDPQAQQEIINSIEEV
YFSNDAFDIVKYELERLPPVLSLQELEEYRDKLKQQQAAELERVTSLQNGLQLAAVICAD
GRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTLQRTDVRLSEMLEEEDYPG
AIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVALSKICKNFDINHYTKVQQ
AYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNTDTKFQKLQYKDLCTHITS
DSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAATVSSVSDGSSVVGTEENSFDRSY
VKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLDVISRLMQVGEEFCGSKSE
VLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSSFDILQLHEFKFMVQSRSP
SVSPSKQPASAISTTVTLFEQYCNGGNPFEIQADSKDDETEDVLASNGYESDEQEKSAYQ
EYDSDSDVPEELKRDYVDEQTGDAPMKSVSRETLRSRKKSDYSLNKGNAPILTNTTLNVV
RLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRNDTFESTGLGLSSSRLRTT
LNRIQESLIDLEVSADPTGTLTAAEERKEKVPSPHLSHLVVLTSGSSLYGLAERVVATES
LVFLAEQFEFLQPHLDAVMPAAKKPFLQQFYSQTVSTANELRKPVYWIVAAKAIDYEQML
LLMANVKWDVKEIMSQHNVYVDSLLKEFEEFNRRLNEVSKRVRIPLIVSNILWEHCMRLA
NRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKEFVETYIKAYYLTEN
DMERWIKEHREYSTKHLTNLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtcgctgatgacccggcagggtctgagaagtcctcaggagagtgtt
catgacctcagtcctattgaaaacctccggtttcctactaaggaggaactcagagaatca
tgggaagaaccaactgatcctcaagctcagcaagaaataattaatagcattgaagaagtt
tatttttccaatgatgcctttgatattgtgaagtacgaattagagaggcttcctcctgta
cttagtcttcaagaactggaagagtacagagacaaattaaaacaacagcaagctgctgaa
ctggaacgcgttacgtcgttgcagaacggccttcagttagcagctgttatttgtgcagat
ggaagaagacacctgaatatcgctaaggaaggcttcacacaaaccagtttgggactgctt
gcgaatcaaaggaagagacagttgcttattggactactgaagtctctgaggacaataaaa
acactgcaaagaactgatgtgcggttaagtgagatgctggaggaagaggactatccagga
gctattcaactgtgtttggaatgccagaaagctgccagcactttcaaacactacagttgt
ataagcgagttgaattcaaagctgcaagatactttggaacaaatagaggaacaattggat
gtagcactctccaagatatgtaagaactttgatatcaatcattatacaaaggttcagcag
gcttacaggctgcttgggaaaacacagacagcaatggaccaattgcacatgcacttcact
caagctattcacaacactgtgtttcaagtagtgcttggatatgtggagctttgtgcagga
aacacagacaccaagtttcagaagttacaatacaaagacctctgtacacatattacatca
gacagctacattccatgtcttgctgatctctgcaaagccctttgggaagtcatgctcagc
tattaccgaacaatgcagtggcatgagaatcatgatcaagatgaggcagcaactgtgtct
tctgtttcagatggcagcagtgtggttggaactgaggagaacagttttgaccgcagctat
gtaaaaaagaaattggaacatgggctttcacgaatatggcaggatgttcaactgaaagtg
aaaacataccttctgggaacagatctgtctaacttcaaatatgatgacttcatatttgta
cttgatgttatcagcaggctgatgcaagttggagaagaattttgtggcagtaagtctgaa
gttttgcaagaatctatcagaaaacaaagcgttaactatttcaaaacataccacagaacc
cgtcttgaagaattaagaatgtttttggagaatgagacctgggaactttgccctgttaaa
tcaagctttgacattttacagcttcatgaatttaaattcatggtgcagtcacgttcccca
tctgtgtcaccaagtaagcagcctgcttcagcaatttcaacgacggtaactttatttgag
cagtactgtaatggaggaaacccatttgaaattcaggctgacagcaaagacgatgagaca
gaagatgtgttagcttccaatgggtatgaatctgatgaacaagaaaaaagtgcctatcaa
gagtatgatagtgacagcgatgttcctgaagagttgaaaagagactatgtagatgagcag
acaggagatgcccctatgaagagtgtttctcgagaaactctgaggagcagaaagaaatcg
gattatagcctcaataaagggaatgcacctatcctgacaaacactacactcaatgtagta
aggcttgttgggaagtatatgcagatgatgaacattctcaagccaattgcatttgatgtc
atccacttcatgtcccagctcttcgactactatctgtatgcagtctatacattttttggc
cgaaatgacacgtttgaatcgacaggattgggcctcagtagtagcagattacgcaccacg
ctgaacagaatccaggagagcctcattgatctagaggtctctgctgatcccacaggaact
ctcacagctgctgaagagagaaaggagaaggtgccaagcccacatctcagtcatctagtc
gttttgacatctggcagttcactctatggtttggcagagagagtggtagccacggaatcc
ttggtttttctggctgagcagtttgagtttcttcagcctcatcttgatgcagtgatgcca
gctgccaagaagccttttcttcagcagttctattctcagactgtgtcaactgccaatgaa
ctacgcaaaccagtttattggattgttgctgctaaagccattgattatgaacagatgttg
cttctcatggctaatgtaaaatgggatgtgaaggaaatcatgtcacaacacaatgtatac
gtagactctcttttaaaggaatttgaagaatttaacagaaggttgaatgaggtatctaag
agagtccgtattccactaatagtatcaaatatactttgggagcactgcatgcgcttggcc
aatagaactcttgtagaaggttatgctaatgtgaagaaatgcagcaatgaaggacgtgcc
ttgatgcaacttgactttcaacagttcttaatgaaactagaaaagttaacagacattaga
cctattccagataaagaatttgtggagacctacattaaagcatactacttaacagaaaat
gacatggagcgttggataaaagaacacagggaatattccactaagcacttgacaaatctg
gtgaatgtttgtctggggtctcacatcaacaagaaggcaagacagaagctgctagctgct
attgatgacatagacaggcctaaaagataa
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integrated database retrieval system
