Gallus gallus (chicken): 420725
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Entry
420725 CDS
T01006
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein
KO
K12200
programmed cell death 6-interacting protein
Organism
gga
Gallus gallus (chicken)
Pathway
gga03250
Viral life cycle - HIV-1
gga03272
Virion - Hepatitis viruses
gga04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
420725 (PDCD6IP)
03272 Virion - Hepatitis viruses
420725 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
420725 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gga04131
]
420725 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gga04147
]
420725 (PDCD6IP)
Membrane trafficking [BR:
gga04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
420725 (PDCD6IP)
Exosome [BR:
gga04147
]
Exosomal proteins
Proteins found in most exosomes
420725 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
420725
NCBI-ProteinID:
NP_001026164
CGNC:
9128
Ensembl:
ENSGALG00000033500
UniProt:
Q5ZJ70
LinkDB
All DBs
Position
2:44772822..44805675
Genome browser
AA seq
882 aa
AA seq
DB search
MTNFISVQLKKASEVDLAKPLCKFIQQSYPSGDAQAEHCRAAEELSKLRKSALGRPLDKH
ESALETLLRYYDQLCSIEPKFPFSENQVCVTFTWKDAFDKGSLFGGSVKLALASLGYEKT
CVLFNCGALASQIAAEQNLDNDEGLKAAAKHYQFASGAFQHIKDTVLSALSREPTVDISP
DTVGTLSLIMLAQAQEVFFLKATRDKMKDGIIAKLANQAADYYGDAYKQCQYKDTLPKYF
YFQEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIGRLQHAADLVKTVASRYDEYIN
VKDLVDKINRALTAAKKDNDFIYHDRVPDLKDLEPIGKASLVKSTPVAVPLSQKFTDLFE
KMVPLQVQQSVSVYNQRKADLVNRLIAQMREATNLANGVLASLNLPAAIEDVSGDTVPQS
ILNKSKAVIEQGGVQTIDQLIKDLPELLQRNKEILDESLRLLDEEETTDNELRTKFKERW
QRTPSNDLYKPLRAEGANFHNILNKAVQADGQVREGYQSHRDTIALLCKPEAELNAAIPS
ANPAKTLQGSEVVNVLKTLLASLDEVKKEREQLENDLKSVNFDMTNKFLTALAQDGAINE
EAISVTELDRIYGSYTQKVQESLKKQEELLKNIQNAHQDFSKMKQSNNESNLREEVLKNL
AVANDNFVELLANLKEGTKFYNELTEILLKFQNKCSDIVFARKTERDELLKDLQQSIARE
PSAPSIPLPTYQTTPAGGSKPAASSTPTPAPRTMVGTKPQPPARPPPPVISAASSSPSAS
APSGTAAAPPSAPTPAAPTPAPGASASSTAPSQAQGPPYPTYPGYPGYCQMPMPIGYNPY
MYGQYNLPYAPSPVFQNPGQPPYPAPQQPGYPFPQQPYFPQQ
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacttcatctcggtgcagctgaagaaggcctcggaggtggacctggccaagccg
ctctgcaagttcattcagcagagctaccccagtggcgacgcccaggccgagcactgccgc
gccgccgaggagctcagcaagctgcgcaagagcgcgttgggccgcccgctcgacaagcac
gagagcgcgctcgagaccctcctcagatattatgatcaactgtgttcgattgaaccaaaa
tttccattctctgaaaatcaggtctgtgtaacgtttacatggaaagatgcttttgataaa
ggatcgctttttggaggctctgtcaaactggctctggcaagtttggggtatgagaagacc
tgtgttttgttcaactgtggagcattggcaagccagattgcagcagaacaaaatctagat
aatgatgaagggctaaaagctgcagctaaacactaccagtttgcaagtggtgctttccaa
cacattaaagacaccgtcctgtcagctctgagccgagaacctacagtggacatctctcca
gacacagttggaactctcagtctcattatgctggctcaagcacaagaagtgttttttttg
aaagcaaccagagataaaatgaaagatggcatcatagctaagctagctaatcaagctgca
gattattatggtgatgcttacaaacagtgtcaatataaagatactctgcccaagtatttt
tatttccaggaggtgtttcccgttctggctgcaaagcactgcattatgcaggccaatgca
gaatatcatcaatctatcctggcaaaacagcagaagaaatttggtgaagaaattgggagg
ttgcagcatgcagcagacttggtgaaaacagtggcatctcgttatgatgaatatataaat
gttaaagatttggttgacaaaatcaaccgtgcgcttacagctgccaaaaaagataatgac
ttcatttatcatgaccgtgttcctgacctgaaagatttggagcccattgggaaagccagc
cttgtcaagtctactccagttgctgtgcccctcagtcagaaattcactgacctgtttgag
aagatggttcccttgcaagttcagcaatctgtgagtgtttataaccagagaaaggcagac
ctagtaaacaggttaatcgcccagatgagagaagccacaaatttggcaaatggagtgttg
gcttccctcaatcttccggctgctatagaagatgtgtctggtgatactgttcctcagtct
attttgaacaagtctaaggctgtgattgaacaaggaggagttcagactattgatcagctg
atcaaagatctacctgaactgctacaaaggaacaaagaaatcttagatgaatcactgcgg
ttattagatgaggaagaaactacggacaatgaactccgaacaaaattcaaagaacgttgg
cagcgaacaccatccaatgatctctataaacctttaagggcagagggagccaacttccat
aatatcttgaataaagctgtgcaagcagatggacaagttagagaaggctatcagtctcac
cgagataccattgcacttctgtgtaagccagaagcagaactcaatgcagccattccttct
gccaacccagcaaaaacattacaagggagcgaggtcgttaatgtattaaaaactttgctg
gctagtctggatgaagtcaaaaaggagagagaacaactggaaaatgacctaaaatctgtg
aattttgacatgacaaataaattcctgactgcacttgcacaggatggtgctataaatgag
gaggctatctctgtgacagagttggacagaatttatggaagttacacacagaaagtgcag
gaatccctgaaaaagcaagaagaacttctcaaaaacattcagaatgcacatcaggacttc
tcaaagatgaaacaatcaaacaatgaatctaatttgagagaagaagttttgaagaactta
gctgtagcaaatgacaacttcgtggaactcctagccaatttaaaagaaggcacaaagttt
tacaatgagctgacagaaatccttctgaagttccaaaacaaatgcagtgacattgtcttt
gctcgcaagactgaaagagatgaactgctcaaagatttgcaacaaagcattgctcgggag
cccagtgcaccctctattcctctgcctacttatcagaccacgccagctggaggaagtaag
cctgctgcttcatcgactcccactccagcacccagaaccatggtgggtactaaaccacag
ccaccagcacggccaccaccaccagtgatttctgcagcaagcagttccccttctgcatca
gcaccctctggaacagctgcagcacctccttctgctcctactcctgctgctcctactcca
gctccaggagccagtgcatcaagcactgcgccttcacaggcacagggacctccttaccca
acttatccaggttacccagggtattgccaaatgccaatgccaataggctataatccatac
atgtatggccagtataatctgccgtatgccccatcacctgtatttcagaaccctggacaa
ccaccatatccagcacctcagcaacctggatacccttttcctcaacagccttatttccca
cagcaataa
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