Gallus gallus (chicken): 420823
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Entry
420823 CDS
T01006
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gga03016
]
420823 (CDKAL1)
Enzymes [BR:
gga01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
420823 (CDKAL1)
Transfer RNA biogenesis [BR:
gga03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
420823 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Styelin
Motif
Other DBs
NCBI-GeneID:
420823
NCBI-ProteinID:
XP_004939679
CGNC:
9618
Ensembl:
ENSGALG00000012677
UniProt:
E1BRH0
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Position
2:complement(59039260..59415499)
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AA seq
582 aa
AA seq
DB search
MPAACDSVLEDIEDIVSAQDLKPRDWRFVRKNVFPKVRKRSSQQRAQTDDDPPHDSVIPG
IQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDNSAEADLWLLNSCTVKNPAEDHFRNS
IKKAQEANKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEAIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFRRVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVEQYKFPSLFINQFYPRPGTPAAKMHQVPAAVKKQRTKDLSQ
LFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPALMGKMVEVNIYEA
GKHFMKGQPVSDARVYTASITRPLAKGEVSGLKEEFRHAPRNGTKWKAHRSAEIPVKAPL
IPWMALHLPWHPEGSGLKILSVSLALLAFLAMVYYGGMKREL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgattcggtgcttgaagatattgaagatattgtgtcagcacaagat
ttgaagccccgtgattggcgatttgtaagaaagaatgtttttccaaaagtgcgaaaacgc
agttcacagcaaagagctcagacagacgatgatcctccgcatgacagtgtgattcctggc
attcagaaaatctggattcgtacatggggatgttctcacaataattcagatggtgaatat
atggcgggacagctggctgcgtatggatacaaaattacagataactctgctgaagcagat
ttatggctgctgaacagttgtacagtgaaaaatccagctgaagaccacttcagaaactca
atcaagaaagcccaagaggcgaacaagaaagtggttctagcaggctgtgttccacaagcc
caacctcgtcaggactacctcaaaggcctgagtattataggggttcagcagatagatcgt
gtagtagaagttgtggaggaaactattaaaggtcattctgtgagactgcttggtcagaaa
aaggataatggaaaacgtttggggggagcacgactggatttaccaaagatcaggaagaat
ccacttatagaaatcatttccatcaatacagggtgtctcaatgcatgtacttactgcaaa
actaagcatgccagaggagatctagcaagctatcccattgaagaactagtggatagagcc
aaacagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggct
tatggcagagacattggcacagacctccctacacttctgtggaagctggttgaagctatt
cctgagggagctatgctgaggcttggcatgacaaatcctccctatattttagagcatctg
gaggaaatggcaaagattctcaatcatccgagagtgtatgcttttctgcacataccagtc
cagtcagcctctgacagtgtgctcatggacatgaaaagagaatactgcgtggcagacttc
agacgagtagtggatttccttaaagaaaaagtgcctggaataacaattgctacagacatc
atctgtggttttccaggagagacagatgaagattttcaagaaactatgaaacttgtagaa
cagtacaagtttccaagcttatttattaatcaattttacccacgcccaggaactcctgct
gcaaaaatgcatcaagttccagctgcggtgaaaaaacaaagaacaaaggatctatcccag
ctgtttcattcctacaatccatatgatcataaggttggagaaaggcagagggttctggtg
acagaagaatcctttgattccaactactatgttgctcacaatccattctatgagcaggtt
cttgtgccaaaggatcctgcgttaatgggtaaaatggtagaagtgaatatttatgaagct
gggaaacactttatgaaggggcagcctgtgtcagatgccagagtttacacagcatccatc
acaagaccattagcaaaaggagaagtttctggtttaaaagaggagttcaggcatgcacca
cggaatggcacgaagtggaaagcacatcggtctgctgagatcccagtgaaagcaccactc
attccctggatggctttgcatctcccatggcacccggaaggaagcggactgaagatactg
tctgtcagcctggctctactggcatttcttgctatggtttactatggaggaatgaaaaga
gaactgtga
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