Gallus gallus (chicken): 421002
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Entry
421002 CDS
T01006
Symbol
CARMIL1
Name
(RefSeq) F-actin-uncapping protein LRRC16A
KO
K20493
leucine-rich repeat-containing protein 16
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gga04131
]
421002 (CARMIL1)
Membrane trafficking [BR:
gga04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
421002 (CARMIL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Cep57_CLD
Spectrin_5
IL34
Motif
Other DBs
NCBI-GeneID:
421002
NCBI-ProteinID:
NP_001152842
CGNC:
10202
Ensembl:
ENSGALG00000013605
LinkDB
All DBs
Position
2:complement(89911310..90085500)
Genome browser
AA seq
1325 aa
AA seq
DB search
MAEESAELPRELIESIRDVIGRKIKISVKKKVKLETKGDKVDNKILVLASCRAFLLTSRI
PTKLELTFSYLEIQGVTSCKPGQLVMETEKCSISMKMASSEDVNEVLAHIGTCLRKIFPG
LSPVRILKKVTMDPSERLANLQALWDSQTVAELGPCGGFSQMYACVCDWLGFPYREEVQW
DVDTIYLTQDTRELNLQDFSHLDHRDLIPIVAALEYNQWFTKLSSKDLKLSTDVCEQILR
VVSRSNRLEELVLENAGLRTDFAQKLASALSHNPNSGLHTINLASNPLEDRGVSSLSIQF
AKLPKGLKHLNLSKTSLSPKGVNSLSQSLSANSLIANTLVYLDLSGNALRGDDLSSLYNF
LAQPNALVHLDLSNTECALDMVCGALLRGCLQHLAVLSLSRTLFSHRKGKEVPPSFKQFF
SSSLALMQINLSGTKLPPEPLKALLLGLACNHNLKEVSLDLSSCELRSGGAQVLEGCIAE
IRNITSLDISDNGLESDLSTLVVWLSKNRSIRHLALGKNFNNMKSKNLTPVLDNLVQMIQ
DEDSPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNAMGDMGAKMLAKALQINTK
LRTVIWDKNNITAQGFQDIAVALEKNYTLRFMPIPMNDASQALKTNPEKTEEALQKIENY
LLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRICVKVQDHLNSLRNCGVDAVQEDVKCA
ERLMRDAKNSKTLLPNLYHLGGAAWAGANGSLSNPIQETLESMAGEVTRVVDEQLKTLLE
SMVDAAENLCPNVMKKAHIREDLIEASTEKISIPRTFVKNVLLEQSGIDILNKISEVKLT
VASFLSDRVVDEILDALSHCHHKLADHLTRRGKPLPQQESLEIELAEEKPTKRSIITVDE
LTEIERLEDLDTCMMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEEVPIHIEDPPFPS
SRPDKRTSGFISELPSEEGRKLEHFTKLRPKRNKKQQPSQAAVSAGVPPDGEQNGLMGRV
DEGVDEFFTKKVTKMDSKRPSTKSSESSEPSEAGDEKKKRDSRKSGFLNLIKSRGSKSER
PQTVVVAEEPSSPKVASKSQAVDSSKKELKSAEQNGGTERSEELKTPDSVEEMQPDDAAK
AERGDSKGSPQGGRRYGVQVMGSGLLAEMKAKQEKRAGLASSEKNAKAEPKAEAAAKARS
SSNTPTSPKPPLQSAKPSLAGRPTVPQKPRSASRTEDAPESPSGPSSPKVALLPPVLKKV
PSDKEKDGQSSPTVRSFSQEAAKRSPGHQPHEFQELKQRSLSKDGHQGSKSSDSGEEADK
DFIFV
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggagagcgccgagctcccccgcgagctcatcgaaagcatcagggatgttatt
gggaggaagatcaaaatttcagtcaagaagaaagtaaagctggaaaccaagggagacaaa
gtagataacaaaatattggtgctggcatcatgtcgggcatttcttttaacatctcgcatt
cccaccaagttagaactaactttcagctacttggagatccaaggagtaacttcctgtaag
ccaggtcagctggttatggaaactgagaaatgcagcatctccatgaagatggcgtcctcg
gaggatgtgaatgaggtgctggcacacattggaacctgcctcaggaagatattccccgga
ctctctccagtgaggattctgaaaaaagtaacaatggacccttcagaaagactggctaat
ctccaggccctgtgggacagtcagacagtggcagaacttggaccttgtggaggcttttca
cagatgtatgcctgtgtgtgtgattggcttggatttccatatagagaagaagtacagtgg
gatgttgatacaatttatctgacacaagataccagagagttgaatttgcaagacttcagc
catcttgaccacagagacttaataccaatagttgctgctctggagtataatcagtggttt
acaaagctgtcctccaaggatctgaaattatccactgatgtctgtgagcagattctgcga
gtagtgagtaggtccaatcgattggaagaactggtattagagaatgctgggcttagaaca
gattttgcacagaaactagccagtgcgctatcccataatcccaactcaggactccataca
atcaaccttgctagcaatccacttgaagaccgaggtgtatcatctctaagcatccagttc
gccaaacttccaaagggactgaaacatttaaatttatctaaaacctccttgtcacctaaa
ggggtgaacagcctttcccagtcactgagtgccaactcgctgatagcgaacacgctcgtc
tatcttgacctctcagggaatgctctccgtggagatgatctctcaagcctctacaatttt
ttggcccagccaaatgcccttgttcatctggatttatccaacacagagtgtgctctagat
atggtgtgtggagccctccttcgtggatgccttcagcatctagctgtccttagtctttcc
aggacacttttttctcacagaaaaggaaaagaagttcctccctccttcaaacagtttttc
agcagctcacttgctttgatgcagattaatctctcgggaactaaacttcctcctgagcct
ctgaaagcgcttttattaggcctggcttgcaatcacaatctgaaggaggtgtctttagat
ctcagtagctgtgagttaagatcgggaggtgcacaagtcttggaaggatgcatagcagaa
atacgcaatatcaccagcctagatatttcagataatggcctagaatctgacctctcaacc
cttgtagtctggcttagtaaaaaccgatcaataaggcacttggcattaggcaaaaacttt
aacaacatgaaatccaaaaatctcactccagtacttgataatttagttcagatgattcaa
gacgaggattcacccctgcagtcattgtccctcgcagattccaagctgaagactgaggtc
accatcattattaatgctttgggcagcaatacttctcttacaaaagtggatattagtgga
aatgccatgggtgatatgggagcaaagatgctggcaaaagctctacagataaacacaaag
ctcagaactgtaatttgggacaagaataacatcactgctcagggattccaggacatagct
gtggcactggaaaaaaattatactttgagatttatgcctatacctatgaatgatgcttcc
caagcactcaaaacaaaccctgagaaaacagaagaggcactgcaaaagatagaaaactac
ttgcttcgtaatcatgagaccagaaagtacctacaggagcaagcataccggttgcagcaa
ggcattgttactagcactactcagcagatgattgacagaatatgtgttaaagtgcaagat
catctcaactctttaagaaactgtggtgtggatgctgtacaggaagatgtcaaatgtgca
gagaggcttatgcgagacgccaagaactccaaaacgctcttgccaaacctgtaccacctt
ggcggagctgcttgggcaggagcaaacggttcactctccaatccaatccaagagacactg
gaatccatggctggagaagtcacaagggttgtggatgagcagcttaagactctccttgaa
tccatggtggatgcagcagaaaatctttgcccaaatgtaatgaagaaagctcatatccgt
gaagacctgattgaagctagcactgagaagatttccatcccacgcacttttgtgaaaaat
gtccttttggagcaatctggaattgatatcctcaataaaatcagcgaagtaaagctgaca
gtggcttctttcctgtctgaccgagttgtagatgaaattctggatgcactttcccactgc
catcacaaactggctgaccatttgaccagacgtggcaaaccacttccacagcaggaatca
ctggaaattgagttagctgaagaaaaaccaactaaacgctctatcatcacggttgacgag
ttaacagagatagaacgtttggaggacctggacacctgtatgatgacacctaaatcaaaa
aggaaaagtattcacagtagaatgctccggccggtgtccagagctttcgagatggaattt
gatctagataaagcactggaagaagtacctatccatatagaagacccaccatttccttcc
agcaggccagacaagcgaacttctggattcatttcagagttgccatcagaagaagggaga
aaactcgaacactttacaaagttaaggcccaaaaggaataaaaaacagcagcccagccaa
gcagcagtatctgctggagtccctccagatggcgaacagaatggcctcatgggaagagta
gatgaaggtgtggatgaatttttcacaaagaaagtcacaaaaatggattcaaagagacca
tcgactaaaagttcggagagcagtgagcccagtgaagcaggtgatgagaagaagaaaagg
gactcaaggaagagtggctttcttaacttaatcaaatcaagaggctccaaatctgaacgt
cctcagactgtggtggtggctgaggagccctcctcacctaaggtggcttcgaaaagtcaa
gcggtggactcaagtaagaaggagctaaaatctgcagagcagaatggtggtacagagcga
tctgaggagttaaagacgccggactcagtggaggagatgcagccagatgatgctgcaaag
gctgaaagaggtgacagcaaaggaagcccacaaggaggccggagatacggtgtgcaggtg
atgggcagcggtcttctcgcagaaatgaaagccaagcaggagaagagagcaggactggca
tcctctgaaaaaaatgcgaaagctgaaccaaaggcagaagcagcagcaaaggcaagaagc
tcttccaatacaccaaccagccccaaacccccgctgcagtcagcgaagcccagcctggca
ggacggcccacggtgccacagaaaccacgctctgcctctcgcaccgaggatgccccagag
tctccctctggtcccagctccccaaaagttgccctgcttccacctgtgctgaagaaagtt
ccatctgataaagaaaaggatggtcagagcagccccacagtcagatcattttctcaagaa
gccgccaaaagaagccctgggcaccagccccacgagttccaggagctgaagcagaggtcc
ttaagtaaagacggccatcagggaagcaagtccagtgactctggcgaagaggcagataaa
gattttatttttgtttaa
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