Gallus gallus (chicken): 421116
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Entry
421116 CDS
T01006
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
gga
Gallus gallus (chicken)
Pathway
gga04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
421116 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gga01009
]
421116 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gga04131
]
421116 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
gga03029
]
421116 (RB1CC1)
Protein phosphatases and associated proteins [BR:
gga01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
421116 (RB1CC1)
Membrane trafficking [BR:
gga04131
]
Autophagy
Autophagosome formation proteins
ULK complex
421116 (RB1CC1)
Mitochondrial biogenesis [BR:
gga03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
421116 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Lant_leader_dom
Pallilysin
Motif
Other DBs
NCBI-GeneID:
421116
NCBI-ProteinID:
XP_015138140
CGNC:
11357
Ensembl:
ENSGALG00000015259
UniProt:
E1C330
LinkDB
All DBs
Position
2:complement(109618633..109692596)
Genome browser
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQAKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFKFENVYSSYLQ
SIEDIKLKLTHLGSAVSVMAKIPLLECLTRHSYRECLGRLDSSAEHGGAESEETENGKSS
ELVLYSDVSKVNNKSVLASFCKSVEHSALEGTNPENVKDDKESGQNTAVQDNETSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALINDGKHLYEAERAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQTSPQSATTPRMES
TTGTTIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENPASPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTSSCVKDVSVENASRSVCMEKCKVIAQDSKVHLRGIKEDLCHFRTLVQKEQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLKDKHQKELQSLKSEYETKINKLLEDDEESKKKIVKL
KGDLLGLEEVLQNKNDEFAMVKNEKEAVVSLQNEKDQKLHELECQMETQNTEIKKLKQSR
EIVLEDLKKLHVENDEKLQLLRAELQSLEQSHLKELENNLQARHLQEFEKMLAEHKDSLD
KLKKENQHRLEQMEESHAAIVQEKQQQVEELKLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLKSQIDKETESLKKEIEKLNSKIQVSSDEYQVGLSELRTLMTIEKDQ
CISELVDRYEEESNLLRTELNKVTVLHQKTSEAEKRLSDQVTELQCKLELEKNALEKEKT
EKMALCEQQEKYEDIIHRLKEEKDLLVSNQEQDKQLLIQKLNSEKEDAVQTACKEFELQK
EASEKGLLEKIQQLEMQVNQSPPSESSAESSLVAELQEKLQEEKMKFLEQLEEQERRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKMLTQQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVSKLRSSNLSPSTYLAATSEACGACAADVPTDTERLASDIAPEGRMD
SAMETSMMAVHENIHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttctggtcaacactggaactacccttacctttgacacagagctt
gctgtacaaaacgtggctgatctgaaacatgcaatacaagctaagtataagattgccatt
cagcaccaggtattggttgtcaatggaggagaatgtatggccccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaattttcttattcaacaaagaaatgattttg
tgtgagcgtccaccagccatccccaaaaccacattttcagcagagaatgagatggaattg
aaagtagaagaatctctcatgatgcctgcagtttttcatacagtggcatcacgaacacag
cttgctgtggaaatgtatgaagttgccaagaagctttgctcgttttgtgaaggtcttgta
cacgatgaacatcttcaacatcaaggctgggctgccataatggccaacttggaagactgt
acatactcttatcaaaagctgcttttcaagttcgaaaatgtatattcaagctatttgcag
tccatagaagatattaagttgaaacttacacacttgggttctgctgtctctgtcatggcc
aagataccactgctggagtgcctaacaagacatagttacagggagtgtttaggaagactg
gattcatcagcagagcatggaggggcggaaagtgaagaaactgagaacgggaaatcttct
gaactggtgctttattctgatgtatctaaagtgaacaataaatcagtgttagcatcattt
tgcaagtcagttgaacattcagcattagaaggcacaaatcctgaaaatgtaaaagacgat
aaggaatctggtcaaaatactgctgtccaggacaatgaaacatcagtagaactgaaagat
gatgatcagccttccttcaatgtgtctttattagactggataaatgttcaagacagacct
aatgatgttgaatcactggtcagaaaatgttttgattctatgagcaggcttgatccaagg
atcatccagccctttttggcagaatgtcgacaaactattgccaaactagataatcagaac
atgaaggctattaaaggccttgaggataggctctatgcattggaccagatgatagcaagt
tgcagcagactggttaatgaacagaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttccgtgctaccagatttgtgtttgagtcatgcaaat
cagttgatgattatgttaactaatcacagaaagctgttagatattaaacagaaatgtacc
actgccaagcaggagcttgcgaataatctacaagtcagactaaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactgcaagcattgcttcgtcttgtgacagaa
ctcctagagagggtcaaggttgtagaggctctcagtactgttcctcagatgtactgtcta
gctgtcgttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttaataaatgatgggaaacacctatatgaagctgaaagggcaaaaagagaatctttc
ggtaaactgttcaggaagtcttttctaaggaatcgcttgttcagaggacttgattcctgg
cctccatccttttgtacaagaaaacctcgcagatttgacagtgagcttccagatatctca
ttaagtgacttgcagtttctgcagtctttttgtccttcagaagttcagccgttactcagg
gttccaatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctg
gtaaaagcagcacagagtttggatgaaatgtcacaaaccattaccgacctgctgaatgaa
caaaaggcctccaatagtcaaacatcaccacaatctgctactacaccaaggatggaaagt
acaacaggaaccacaattgctacctcttcaagaactcctccatcactcagtcttcagggt
cccctgtgtcctcctgtgtgtccccctgctccactagaagaattgtctccagacagcatt
gatgctcatacatttgattttgaaactattgcccacccaaacctggagcaagctctcaag
caagggtcattggacttggattcattggcagaaagtccagaatctgactttatgtcagca
gtaaatgaattcgtaatagaggaaaatccagcctctcctaatgttataagtgatccacag
agtcccgaaatgatggtggaatctctttattcttctgttatcaatgcaatagacagtaga
cgtatgcaagacacaagttcttgtgtaaaggacgtttcagtagaaaatgcttctcgcagt
gtttgcatggagaagtgtaaggttattgctcaagattcaaaagtacatttaagaggtata
aaagaagatctttgccactttagaacacttgtacaaaaagaacagtgtgacttttctaat
tctttaaaatgcacttcattagaaatagtaaatactattgaaaaggtaaaactttcactt
gaaaaaacactaaaagataaacatcaaaaagaacttcagtctttgaaaagtgaatatgaa
accaaaattaataaattactggaggatgatgaggaaagcaaaaaaaagattgttaagtta
aaaggtgacttgttaggccttgaggaagtacttcagaataagaacgatgaatttgcaatg
gtgaaaaatgaaaaggaagctgtagtttcccttcagaatgaaaaagatcagaaactacat
gaattggaatgtcaaatggagacacaaaatactgaaattaagaaactgaaacagtcacgt
gagatagtactcgaagacttgaaaaaacttcacgttgaaaatgatgaaaaactacaactt
ctgagggcagaactccagagtttagaacaaagccatttaaaagaactggaaaacaacctt
caggccaggcatttacaggaatttgagaagatgcttgctgagcacaaggacagtttagat
aaattaaaaaaagagaaccagcatagacttgaacaaatggaggaatctcatgcagcaatt
gtgcaagagaaacagcaacaggtagaagagttaaaactcaaagtttcagatctgtctgat
ttgaggtgcaaattagaagttgaacttgccctgaaagaagcagaaactgatgaaatgaag
cttctcttggaagaaagccgaaaccagcaacaagagaccttaaaatctcagattgataag
gaaactgaaagcttaaaaaaagagatagagaaattaaacagtaagatacaagttagcagt
gatgaatatcaagtgggcttatcagaactaagaactttaatgacaattgagaaagatcaa
tgcatttctgagctagtagacagatatgaagaagaatcaaatttgcttagaactgaacta
aacaaagtgacagttctgcatcaaaaaacttctgaagcagaaaaaagactttcagatcaa
gtaacagaactgcagtgcaagttagagttggaaaagaatgccctagaaaaggaaaaaaca
gaaaaaatggcactctgtgagcagcaggaaaaatatgaagatattatccataggcttaag
gaagagaaagatctgttagtgtctaaccaagaacaagacaagcagttgctcattcagaag
ctcaattctgaaaaagaagatgcagtacaaactgcctgtaaggaatttgaattacaaaag
gaagcttctgaaaaagggcttttggaaaaaatacaacaacttgagatgcaagtaaatcag
agtcctcccagtgaatcatctgctgaatcaagcttggttgctgaacttcaagaaaagctt
caggaagaaaaaatgaaattcttggagcagcttgaagaacaagaaagaaggaagaatgaa
gaaatgcagaacattagaacatctctaactgcagaacagcagaccaactttaacactgtt
ctagcaagagaaaaaatgaagaaagaaaatataattaatgatcttagtgacaaattaaaa
atgctaacacagcagcaagaaaaagataaggatttgattgaaacactttctgaagatcga
gctcgtttacttgaagaaaagaaaaagcttgaagaagaagtcagtaagctgagaagtagt
aatctttctccatcaacctacttagcagcaacttcagaagcttgtggagcctgtgcagct
gatgttcccactgatacagagagattggcttctgacattgcacctgaagggaggatggac
tctgccatggaaaccagtatgatggctgtgcatgaaaatatccacatgtctgaagaaaaa
cagaggatcatgttgttagaaagaactttgcagttgaaagaagaggagaataagagatta
aatcaaagattgatgtcccagagcatgtcatcagtatcctcaagacattctgaaaaaata
gcgattagagattttcaggttggcgacttggttctcataatcttagatgaaagacatgac
aactacgtattatttactgttagtccaaccttgtatttcttgcactcagaatctcttgct
gcactggacctcaaaccaggtgagtgtgcttcaggtgcatctaggagaccttgggtgctg
ggaaaagtgatggaaaaggaatattgccaggcaaaaaaggctcaaaacagatttaaagtt
cctctgggtacaaaattctacagagtgaaagcagtaccatggaacaagaaagtataa
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integrated database retrieval system
