Gallus gallus (chicken): 421216
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Entry
421216 CDS
T01006
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
gga
Gallus gallus (chicken)
Pathway
gga04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
421216 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gga04812
]
421216 (SPTBN1)
Cytoskeleton proteins [BR:
gga04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
421216 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
421216 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
SLATT_6
PH_11
Motif
Other DBs
NCBI-GeneID:
421216
NCBI-ProteinID:
NP_001186354
CGNC:
6184
Ensembl:
ENSGALG00000029512
UniProt:
A0A1D5PJY1
LinkDB
All DBs
Position
3:complement(2697015..2819160)
Genome browser
AA seq
2362 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLSAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLMSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEENFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAGSPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALISALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSPNAE
AIQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRKPP
TPEPSPKVAEDGGSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSS
KESSPVPSPTADRKAKAAIQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHNKKASSRS
WHNVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKEAVCEIAVDYKKKKHVFKLRLTD
GNEYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSP
GKREKDKEKDKEKRFSLFGKKK
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacagtggcgacagattatgacaacattgaaatccagcagcagtacagtgat
gtcaacaaccgctgggatgtcgatgactgggacaatgaaaatagttctgctcgactgttt
gaacgatctcgcatcaaggccctagctgatgaacgtgaggcagttcagaagaagactttc
accaagtgggttaattcccacttggcacgtgtgtcatgcagaattacagatttgtacacc
gaccttcgcgatggaaggatgctcatcaaactcctggaagttctttcaggagagagactt
cccaaaccaactaagggaaggatgcgcatccattgtttggagaatgttgataaagccctg
cagttcctgaaggagcaacgagtgcacctggaaaacatgggatctcatgatattgtggat
gggaatcacaggctgactcttggccttatttggactattatcctgagattccagatccaa
gatatcagtgttgaaactgaggacaacaaggagaagaagtctgctaaggatgcactgctt
ttgtggtgccagatgaagacagctggttaccccaacgtcaacattcacaactttacaaca
agctggagggatggaatggctttcaatgcattgatacacaagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gctgagcaacaccttggtcttactaagctcctggaccctgaggatatcagtgttgatcat
cccgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctctaaaatg
aaagctttagctgttgaaggaaagcgcattggaaaggtgcttgacaatgccattgaaaca
gagaaaatgattgaaaaatatgaatcgctggcttctgatcttctggagtggattgagcaa
accattatcatcctcaacaaccgcaaatttgccaactcgctagttggtgtgcaacagcag
ctgcaggcattcaacacctaccgcacagtagagaaaccacccaaatttacagaaaaagga
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagta
tacatgccaagggagggcaaactcatctctgacataaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacgccgatttgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctggtttctcaggataactttggctttgaccttccagcagtagaggctgca
acgaaaaagcacgaggccattgaaacagacattgcagcatatgaagagcgagtccaggct
gtggttgcagttgcaaaggagcttgagactgaaaattatcatgatatcaaacgtatcact
gcaagaaaggacaatgttatacgcctgtgggagtacctcctggagctactcagggcacga
agacaacggctggaaatgaatcttggcctacaaaagattttccaggaaatgctatacatt
atggactggatggatgagatgaaggtgcttctgctgtcacaagactatggcaaacatttg
ttaggagtcgaagacctgttgcagaaacatgctctagtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcatctgctcagaagtttgccactgatggagaaggt
tacaagccatgtgacccacaggttattagggatcgcgtcgctcacatggagttctgttac
caagagctgtgccagctttcagctgagcgccgggcccgcttggaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaagagggttggatcagggagaaggagcagatc
ctttcatctgatgactacgggaaggacctgaccagcgtcgtccgtctcatgagtaaacat
aaggcatttgaagatgaaatgagtggtcgcagtggccactttcagcaggcgataaaagaa
ggtgaagacatgatcgcggaagagaattttgggtctgagaaaatcagagaaagaattaag
gatattcgggagcagtgggctaacttggaacagttatctgccattaggaagaaacgtctg
gaggaagcctctctccttcaccagttccaggctgatgctgatgacattgatgcatggatg
ttggacatcctcaaaattgtctccagcaatgatgttggccatgacgaatattccactcag
tccttggtcaagaaacacaaggatgttgctgaagagattgcaagctatcggccaaccatt
gactcgcttcatgaacaggcaaaggctctaccacaggagcatgccgggtctccagatgtg
caaggcaggttgtctggaatagaagaaagatacaaagaggttgctgagctaactcggctg
cgtaaacaggctttgcaggatacccttgctctttataagatgttcagtgaggcagatgct
tgtgagctttggattgatgagaaggagaagtggctgaataatatgcagattccagagaag
ctggaggacctggaagtgatccagcacagatttgaaagcttagaaccagaaatgaacaat
caggcttcccgtgttgctgtagtgaaccaaattgcaagacagctaatgcatagtggccat
ccaagtgagaaggagataaaagcacagcaagataaactcaacacaagatggagccagttc
agagaactggtagacaggaagaaagatgccctgatctctgccttaagtatccagaattac
caccttgaatgtaatgaaaccaagtcctggatcagggagaaaaccaaagtgattgaatcc
acacaagatttgggtaacgatcttgctggagtgatggctctgcagcggaagctgacaggc
atggaacgtgacctggtagccattgaagctaagctcagtgacctgcaaaaggaggcagaa
aagttggaatcagagcatcctgaccaggcgcaagctatcctttcacggcttgcggaaatc
aatgatgtatgggaagaaatgaagaccaccctgaaaaaccgggaggagtctcttggagag
gcaagcaaactgcagcagttcctgagagatctggatgacttccagtcttggctatccaga
acacagactgcaatcgcctctgaagacatgccgaacacactgacagaggctgagaaacta
ctcactcaacatgagaatattaagaacgaaatcaacaattacgaggaagactatcagaaa
atgagggacatgggtgagatggtgacacaagggcagactgatgctcagtacatgttctta
cgccagcgcctacaggctttggatactggatggaatgagcttcacaaaatgtgggagaac
cggcaaaatcttctttcccagtctcatgcctaccagctctttctcagagataccaagcaa
gcagaagcatttcttaacaaccaggagtatgttttggcacacacagaaatgcccactacc
ttggaaggagcagaagctgctattaaaaaacaggaggatttcatgaccaccatggatgcg
aatgaagaaaagatcaatgcagttgtagagacgggcaggaggctagttagtgatgggaac
attaactctgacaaaatccaggagaaagtggactctattgatgacagacataggaagaac
cgtgaagcagccagcgagcttctgatgagactgaaggataacagggatcttcagaagttt
cttcaggattgtcaagagctctcactctggatcaatgagaagatgcttacagcccaggat
atgtcttacgacgaggcaagaaacctgcacagcaaatggctgaagcatcaggcatttatg
gcagaacttgcatccaacaaagaatggctggagaagattgaaaaggagggaatgcagctc
attgcagagaaaccagagactgaagctgtagtgaaagaaaagctaacaggtcttcatcaa
atgtgggaagagctcgaatccactactcagaccaaggctcagcgtctctttgatgcaaac
aaggcggagctttttacccagagctgtgctgatttggataagtggctgaatggtttggag
agccaaattcagtcagatgactacggaaaagacctcaccagtgtcaacatcctattgaag
aagcagcagatgctagagaatcaaatggatgtccgtaagaaggagatagaagagctacaa
agccaggcacgggctctaagtcaagaagggaagagtacagatgaggtagatggtaaacgc
cttaccgttgaaaagaaatttttggagttgttggaacctttgaatgaaagaaaagcaaac
ctgctggcctccaaagaaatccaccagttcaaccgggacgtggaagatgaaattttgtgg
gttggagagaggatgcctatagcaacatctactgatcacggacacaacctccagactgtg
cagctactgataaagaaaaatcagacacttcagaaagaaatccaaggacatcagcctcgt
attgatgatatttttgagaggagtcaaaacattatcacagacagtagccctaatgctgaa
gcaattcagcagagacttgcagacctgaagcagctgtggaacctcctaattgaggagaca
gagaaacgccacaaacgcctggaggagtctcaccgggcacagcagtactactttgatgct
gccgaggctgaggcctggatgagtgagcaggagctttacatgatgtcagaagagaaagcc
aaggatgaacagagtgcggtatccatgttgaagaaacatcagattctggaacaggctgtg
gaagactatgctgagactgtgcaccagctttcaaagaccagcagaactttggtggcagat
aatcatcctgaaagtgagcgtatcagcatgcgccagtccaaagtggataagctgtatgca
ggcctgaaggatctggcagaagagagaaggggcaagctggatgagagacacaggctgttc
cagctgaacagagaggtggatgacctggagcagtggattgctgaaagggaggtggtggca
ggatcccatgagctgggacaggattatgaacacgtaacgatgctacaggagcgattccga
gaatttgcccgagacactggaaacattggacaggagcgtgttgataccgttaaccatctg
gctgacgagctcatcaactctgggcactcagatgctgccacaattgcagaatggaaggat
ggtctcaatgaggcctgggctgatctcctggagctcattgacacaagaacacaaattctt
gcagcctcttacgaactgcacaaattttaccacgatgccaaggaaatcttaggacgcatt
caagacaaacacaagaaactgccagaagagcttggtagagaccaaaacacagtggaaaca
ctacagagaatgcacacaacatttgaacatgatatccaagcgctcggcacacaggtaaga
cagctccaggaggatgctgcacgccttcaggctgcctatgctggagacaaagctgatgac
atccagaagagggaaaatgaggtcctagaagcatggaaggcgctgttggatgcctgtgag
ggccgcagggttaggctggtggacacaggagacaaattccgtttcttcagcatggttcgg
gatctcatgctttggatggaagatgttatccggcagatcgaagcccaggaaaagccaagg
gatgtttcatctgttgaactactaatgaacaatcaccagggtatcaaagcggaaattgat
gcccgaaatgacagctttactacctgtattgaactcggcaaatctcttctggcaagaaaa
cactatgcatcagaggagatcaaggaaaagctactgcagctgacagagaaaagaaaagaa
atgattgacaagtgggaagacagatgggagtggctgagactgattttggaggtgcatcag
ttttcaagagacgcaagtgtggctgaggcctggctgctgggacaggagccctacctatcc
agtcgtgaaataggtcagagtgttgacgaagtggaaaaattaattaagcggcatgaagca
tttgagaaatctgcagctacttgggatgagagatttgcagcgctggaaagactgactacg
ttggaactgctggaagttcgtcgacaacaagaggaagaagagaggaagagaaagccacct
actccagagccaagccccaaagttgcagaagatggaggctcccagcagcaatgggatggg
acaaaaggagaacaggtttcccaaaatggtttgccatcagaccaggaatctccacgggtg
gcagaaactgcggaaacaaatgaaatggttaatggagctgcagaacagaggacaagttcg
aaagagtctagtcccgttccttctccaacagcagaccgcaaagccaaggctgccattcag
gctcagactgctgctaccctaccagccaaaacacaggagattccttcagctcagatggag
ggcttcttgcatcgtaaacatgaatgggagacacacaacaagaaagcctcaagcaggtca
tggcataacgtgtactgtgtcataaacaaccaagagatgggcttctacaaggattcaaaa
gctgctgcttctggcattccctatcacaatgagattccagtcagcttgaaagaagcagtc
tgtgaaatagcagtcgattataaaaagaaaaagcatgtgttcaagctaagattgactgat
ggcaatgaatacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggcc
atcacatcagctatctcatctgacaaaatcgaagtgtccccgacaactcagagcactcca
gcctccagccgtgcccagaccctgcctgccagcgtcacaataaccagtgagtccagtcct
ggcaagagagagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaa
aagaagtga
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integrated database retrieval system
