Gallus gallus (chicken): 421216
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Entry
421216 CDS
T01006
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
gga
Gallus gallus (chicken)
Pathway
gga04517
IgSF CAM signaling
gga04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
421216 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
421216 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gga04812
]
421216 (SPTBN1)
Cytoskeleton proteins [BR:
gga04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
421216 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
421216 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
421216
NCBI-ProteinID:
NP_001186354
CGNC:
6184
Ensembl:
ENSGALG00000029512
UniProt:
A0A1D5PJY1
LinkDB
All DBs
Position
3:complement(2874649..2997551)
Genome browser
AA seq
2362 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLSAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLMSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEENFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAGSPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALISALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSPNAE
AIQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRKPP
TPEPSPKVAEDGGSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSS
KESSPVPSPTADRKAKAAIQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHNKKASSRS
WHNVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKEAVCEIAVDYKKKKHVFKLRLTD
GNEYLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSP
GKREKDKEKDKEKRFSLFGKKK
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacagtggcgacagattatgacaacattgaaatccagcagcagtacagtgat
gtcaacaaccgctgggatgtcgatgactgggacaatgaaaatagttctgctcgactgttt
gaacgatctcgcatcaaggccctagctgatgaacgtgaggcagttcagaagaagactttc
accaagtgggttaattcccacttggcacgtgtgtcatgcagaattacagatttgtacacc
gaccttcgcgatggaaggatgctcatcaaactcctggaagttctttcaggagagagactt
cccaaaccaactaagggaaggatgcgcatccattgtttggagaatgttgataaagccctg
cagttcctgaaggagcaacgagtgcacctggaaaacatgggatctcatgatattgtggat
gggaatcacaggctgactcttggccttatttggactattatcctgagattccagatccaa
gatatcagtgttgaaactgaggacaacaaggagaagaagtctgctaaggatgcactgctt
ttgtggtgccagatgaagacagctggttaccccaacgtcaacattcacaactttacaaca
agctggagggatggaatggctttcaatgcattgatacacaagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gctgagcaacaccttggtcttactaagctcctggaccctgaggatatcagtgttgatcat
cccgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctctaaaatg
aaagctttagctgttgaaggaaagcgcattggaaaggtgcttgacaatgccattgaaaca
gagaaaatgattgaaaaatatgaatcgctggcttctgatcttctggagtggattgagcaa
accattatcatcctcaacaaccgcaaatttgccaactcgctagttggtgtgcaacagcag
ctgcaggcattcaacacctaccgcacagtagagaaaccacccaaatttacagaaaaagga
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagta
tacatgccaagggagggcaaactcatctctgacataaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacgccgatttgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctggtttctcaggataactttggctttgaccttccagcagtagaggctgca
acgaaaaagcacgaggccattgaaacagacattgcagcatatgaagagcgagtccaggct
gtggttgcagttgcaaaggagcttgagactgaaaattatcatgatatcaaacgtatcact
gcaagaaaggacaatgttatacgcctgtgggagtacctcctggagctactcagggcacga
agacaacggctggaaatgaatcttggcctacaaaagattttccaggaaatgctatacatt
atggactggatggatgagatgaaggtgcttctgctgtcacaagactatggcaaacatttg
ttaggagtcgaagacctgttgcagaaacatgctctagtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcatctgctcagaagtttgccactgatggagaaggt
tacaagccatgtgacccacaggttattagggatcgcgtcgctcacatggagttctgttac
caagagctgtgccagctttcagctgagcgccgggcccgcttggaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaagagggttggatcagggagaaggagcagatc
ctttcatctgatgactacgggaaggacctgaccagcgtcgtccgtctcatgagtaaacat
aaggcatttgaagatgaaatgagtggtcgcagtggccactttcagcaggcgataaaagaa
ggtgaagacatgatcgcggaagagaattttgggtctgagaaaatcagagaaagaattaag
gatattcgggagcagtgggctaacttggaacagttatctgccattaggaagaaacgtctg
gaggaagcctctctccttcaccagttccaggctgatgctgatgacattgatgcatggatg
ttggacatcctcaaaattgtctccagcaatgatgttggccatgacgaatattccactcag
tccttggtcaagaaacacaaggatgttgctgaagagattgcaagctatcggccaaccatt
gactcgcttcatgaacaggcaaaggctctaccacaggagcatgccgggtctccagatgtg
caaggcaggttgtctggaatagaagaaagatacaaagaggttgctgagctaactcggctg
cgtaaacaggctttgcaggatacccttgctctttataagatgttcagtgaggcagatgct
tgtgagctttggattgatgagaaggagaagtggctgaataatatgcagattccagagaag
ctggaggacctggaagtgatccagcacagatttgaaagcttagaaccagaaatgaacaat
caggcttcccgtgttgctgtagtgaaccaaattgcaagacagctaatgcatagtggccat
ccaagtgagaaggagataaaagcacagcaagataaactcaacacaagatggagccagttc
agagaactggtagacaggaagaaagatgccctgatctctgccttaagtatccagaattac
caccttgaatgtaatgaaaccaagtcctggatcagggagaaaaccaaagtgattgaatcc
acacaagatttgggtaacgatcttgctggagtgatggctctgcagcggaagctgacaggc
atggaacgtgacctggtagccattgaagctaagctcagtgacctgcaaaaggaggcagaa
aagttggaatcagagcatcctgaccaggcgcaagctatcctttcacggcttgcggaaatc
aatgatgtatgggaagaaatgaagaccaccctgaaaaaccgggaggagtctcttggagag
gcaagcaaactgcagcagttcctgagagatctggatgacttccagtcttggctatccaga
acacagactgcaatcgcctctgaagacatgccgaacacactgacagaggctgagaaacta
ctcactcaacatgagaatattaagaacgaaatcaacaattacgaggaagactatcagaaa
atgagggacatgggtgagatggtgacacaagggcagactgatgctcagtacatgttctta
cgccagcgcctacaggctttggatactggatggaatgagcttcacaaaatgtgggagaac
cggcaaaatcttctttcccagtctcatgcctaccagctctttctcagagataccaagcaa
gcagaagcatttcttaacaaccaggagtatgttttggcacacacagaaatgcccactacc
ttggaaggagcagaagctgctattaaaaaacaggaggatttcatgaccaccatggatgcg
aatgaagaaaagatcaatgcagttgtagagacgggcaggaggctagttagtgatgggaac
attaactctgacaaaatccaggagaaagtggactctattgatgacagacataggaagaac
cgtgaagcagccagcgagcttctgatgagactgaaggataacagggatcttcagaagttt
cttcaggattgtcaagagctctcactctggatcaatgagaagatgcttacagcccaggat
atgtcttacgacgaggcaagaaacctgcacagcaaatggctgaagcatcaggcatttatg
gcagaacttgcatccaacaaagaatggctggagaagattgaaaaggagggaatgcagctc
attgcagagaaaccagagactgaagctgtagtgaaagaaaagctaacaggtcttcatcaa
atgtgggaagagctcgaatccactactcagaccaaggctcagcgtctctttgatgcaaac
aaggcggagctttttacccagagctgtgctgatttggataagtggctgaatggtttggag
agccaaattcagtcagatgactacggaaaagacctcaccagtgtcaacatcctattgaag
aagcagcagatgctagagaatcaaatggatgtccgtaagaaggagatagaagagctacaa
agccaggcacgggctctaagtcaagaagggaagagtacagatgaggtagatggtaaacgc
cttaccgttgaaaagaaatttttggagttgttggaacctttgaatgaaagaaaagcaaac
ctgctggcctccaaagaaatccaccagttcaaccgggacgtggaagatgaaattttgtgg
gttggagagaggatgcctatagcaacatctactgatcacggacacaacctccagactgtg
cagctactgataaagaaaaatcagacacttcagaaagaaatccaaggacatcagcctcgt
attgatgatatttttgagaggagtcaaaacattatcacagacagtagccctaatgctgaa
gcaattcagcagagacttgcagacctgaagcagctgtggaacctcctaattgaggagaca
gagaaacgccacaaacgcctggaggagtctcaccgggcacagcagtactactttgatgct
gccgaggctgaggcctggatgagtgagcaggagctttacatgatgtcagaagagaaagcc
aaggatgaacagagtgcggtatccatgttgaagaaacatcagattctggaacaggctgtg
gaagactatgctgagactgtgcaccagctttcaaagaccagcagaactttggtggcagat
aatcatcctgaaagtgagcgtatcagcatgcgccagtccaaagtggataagctgtatgca
ggcctgaaggatctggcagaagagagaaggggcaagctggatgagagacacaggctgttc
cagctgaacagagaggtggatgacctggagcagtggattgctgaaagggaggtggtggca
ggatcccatgagctgggacaggattatgaacacgtaacgatgctacaggagcgattccga
gaatttgcccgagacactggaaacattggacaggagcgtgttgataccgttaaccatctg
gctgacgagctcatcaactctgggcactcagatgctgccacaattgcagaatggaaggat
ggtctcaatgaggcctgggctgatctcctggagctcattgacacaagaacacaaattctt
gcagcctcttacgaactgcacaaattttaccacgatgccaaggaaatcttaggacgcatt
caagacaaacacaagaaactgccagaagagcttggtagagaccaaaacacagtggaaaca
ctacagagaatgcacacaacatttgaacatgatatccaagcgctcggcacacaggtaaga
cagctccaggaggatgctgcacgccttcaggctgcctatgctggagacaaagctgatgac
atccagaagagggaaaatgaggtcctagaagcatggaaggcgctgttggatgcctgtgag
ggccgcagggttaggctggtggacacaggagacaaattccgtttcttcagcatggttcgg
gatctcatgctttggatggaagatgttatccggcagatcgaagcccaggaaaagccaagg
gatgtttcatctgttgaactactaatgaacaatcaccagggtatcaaagcggaaattgat
gcccgaaatgacagctttactacctgtattgaactcggcaaatctcttctggcaagaaaa
cactatgcatcagaggagatcaaggaaaagctactgcagctgacagagaaaagaaaagaa
atgattgacaagtgggaagacagatgggagtggctgagactgattttggaggtgcatcag
ttttcaagagacgcaagtgtggctgaggcctggctgctgggacaggagccctacctatcc
agtcgtgaaataggtcagagtgttgacgaagtggaaaaattaattaagcggcatgaagca
tttgagaaatctgcagctacttgggatgagagatttgcagcgctggaaagactgactacg
ttggaactgctggaagttcgtcgacaacaagaggaagaagagaggaagagaaagccacct
actccagagccaagccccaaagttgcagaagatggaggctcccagcagcaatgggatggg
acaaaaggagaacaggtttcccaaaatggtttgccatcagaccaggaatctccacgggtg
gcagaaactgcggaaacaaatgaaatggttaatggagctgcagaacagaggacaagttcg
aaagagtctagtcccgttccttctccaacagcagaccgcaaagccaaggctgccattcag
gctcagactgctgctaccctaccagccaaaacacaggagattccttcagctcagatggag
ggcttcttgcatcgtaaacatgaatgggagacacacaacaagaaagcctcaagcaggtca
tggcataacgtgtactgtgtcataaacaaccaagagatgggcttctacaaggattcaaaa
gctgctgcttctggcattccctatcacaatgagattccagtcagcttgaaagaagcagtc
tgtgaaatagcagtcgattataaaaagaaaaagcatgtgttcaagctaagattgactgat
ggcaatgaatacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggcc
atcacatcagctatctcatctgacaaaatcgaagtgtccccgacaactcagagcactcca
gcctccagccgtgcccagaccctgcctgccagcgtcacaataaccagcgagtccagtcct
ggcaagagagagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaa
aagaagtga
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integrated database retrieval system
