Gallus gallus (chicken): 421223
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Entry
421223 CDS
T01006
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1
KO
K19657
nephrocystin-1
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gga03037
]
421223 (NPHP1)
Cilium and associated proteins [BR:
gga03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
421223 (NPHP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_2
SH3_9
BUD22
Motif
Other DBs
NCBI-GeneID:
421223
NCBI-ProteinID:
NP_001186358
CGNC:
6212
Ensembl:
ENSGALG00000008195
UniProt:
E1C5D4
LinkDB
All DBs
Position
3:complement(3072613..3092121)
Genome browser
AA seq
681 aa
AA seq
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MTGRRARSPLQRVQRQSRELRAQVEALRGEGADAAVGRRAALRQRCFQLQKLVDENINTL
HSLKKADEPAPVGNYNQRKEEEEKLLLKLSQQLQKFCHILDQDNVATNDTVSEGRQKDPQ
REDKVKEEAESADDNGESSEEGESEETDEEDEDKLLDDPDVKECIAVGNFNAQQDGDLTF
TKGEVLLIHDKKADGWWVAENSKGERGLVPRTYLAVHNEDEENQEESDEHIEVVDETADG
TEIRKRTDSHWSAVRKAITESDTVEILATMGAVPTGFRLSTLSQLLEEGNQFRASYFLQP
KLTPSQLAFKDLVWDSEKNTICPIPTRVSLIVTLCSCKTIPLPAASIQVLSRHVRLCLFD
GNRVLSNIHTVRATWQPKNPQMWTFSPRVTGILPSLLDGDCFVRSNSLSSDIGLLLELGI
TYIRNSTGERRELSCGWAFQKLFTSDGMPVPSKMYELLLNGGTPYERGVEVDPSLSRRAG
SGVFHQLISLKKQPVLVVKLRSLSTQSKDILNLLPETLIGSMCYIHLLIFYRQILGDALL
RDRINMQSAELICNPILATFPQLVDQPDLMDALRSAWADRERTLKRSEKRDREFLKSVFI
LVYHDSAFPLLRSTLLPSYKWAEEESEASRWRVIADFLRKSQEKDGALQSLLSAENTHTA
FDISELAYDFLGETRKNNPTV
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgacggggcggcgggcgcgcagcccgctgcagcgagtgcagcgacagagccgggagctg
cgggcacaggtggaagcgctgcggggagagggcgcggacgcagccgtcgggcggcgagcg
gccctgaggcagagatgttttcagctgcagaaactggtggatgagaatataaatactctt
catagtttgaaaaaagctgacgagcctgcacctgtggggaactataatcagaggaaagaa
gaagaagaaaagctattgctaaagttgtcccagcagctgcagaaattttgtcatatcttg
gatcaggataatgtggctacaaatgacacagtgagcgagggacgtcagaaagatcctcaa
agagaagacaaagttaaagaagaggctgagagtgctgatgacaatggagaaagcagtgag
gaaggagaaagtgaagaaacagatgaggaagatgaggataaattgttggatgatcctgat
gttaaagaatgcattgcagtgggaaactttaatgcacagcaggacggggatctcacattt
acgaaaggtgaagtcctgcttatacatgataagaaggcggatggctggtgggtagccgag
aactcaaaaggggagagaggcctcgtgcctagaacctatcttgcggtccataatgaagat
gaagaaaaccaagaggaaagtgatgaacacatagaagtggtggatgaaacagcagatggt
actgaaattagaaaaagaacagactctcactggagcgctgtaagaaaagctatcaccgag
agtgacacagtagagatattggcaaccatgggagctgttcctacaggattccgtctatcc
acactttcccagctcttagaagaaggtaatcagttcagagcaagttacttcttgcagcct
aaacttactccatcccagctggcttttaaagatttggtgtgggactctgaaaaaaatact
atctgtcctataccaactcgagtatccctgattgtaactctatgtagctgtaaaacgatt
cctctcccagcagccagtattcaggttctcagtagacacgttcgactctgtctattcgat
ggcaatcgggtactgagtaacattcatacagtgagagctacgtggcaacctaaaaaccct
caaatgtggaccttttctccaagggtaacaggcattttacccagcttactggatggtgac
tgctttgtcaggtccaattccttatcttcagacattggtttactacttgaacttggcatc
acttacattcgcaactcaacaggtgaacgacgagagctaagctgtggctgggcatttcag
aagctttttacttctgatggaatgcctgttccttccaaaatgtatgagctgctattaaat
ggtggtactccttatgagagaggtgttgaggttgacccatcactatcaaggagagcaggc
agtggtgtttttcatcagcttatatcactcaagaagcagccagtgcttgtagtgaaactg
aggtcattaagcacacagtcaaaggacatcctgaatttgttaccagaaacattaattggc
agtatgtgctacatccatctcttgatattttatcgacaaatacttggtgatgcactcctg
agagacagaataaacatgcaaagtgcagaattaatctgtaatcctattttagcaactttt
cctcaactcgtggatcagccagacctgatggatgcactgcggagtgcttgggcggacaga
gaaagaactttgaagagatcagaaaagagagatcgagaattcctgaagtctgtgttcatc
ctggtgtaccatgactcagccttccctctcctccggtccactttgctccccagctacaag
tgggcagaggaggagtccgaagcgtctcgctggagagtgattgctgacttcctgagaaag
agccaagagaaagatggtgcccttcagtctctgctgtccgcagaaaacactcacacagcc
tttgacatctcagagctggcctatgatttcttgggagaaacgaggaaaaataatcccaca
gtatga
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