Gallus gallus (chicken): 421386
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Entry
421386 CDS
T01006
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gga03036
]
421386 (TRERF1)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
421386 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2
zf-C2H2_4
Myb_DNA-binding
zf-met
PixA
Myb_DNA-bind_7
zf-C2H2_2
Myb_DNA-bind_6
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
421386
NCBI-ProteinID:
XP_015139335
CGNC:
7515
Ensembl:
ENSGALG00000009896
LinkDB
All DBs
Position
3:complement(22963431..23069836)
Genome browser
AA seq
1163 aa
AA seq
DB search
MGDQQLYKTNHTANSNENLYYQHQMNSLPSLNHSYGTSVIDAPQASPLSPQFPQDSRDSI
ALPVGSKSLGSMDTLRQTWTHSGSGNHIPVRNNLSNQSSMWSPLGQGESHDGYQYSYSQP
SENRSQKITSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTETSMADNSGDSALRQLLSQ
KPAVEQQPVTSSVQRYQPVPQQTHQNFASTQQKQQMQVMQHQQLYYDYQQHLSQMQIHSA
FQQGQTHVQQMQSQQLLPQQMQHLQQAQYYAQPQQGHQRLSIHEIQQQQQQPTRQQQQRQ
CPMQIAQYYQTQPVMQLQQQQQQMQLQLPPYHREPDPKTVHEPHQYPQDPSHPVQLIQLG
AAPPYCYQDPHEQYRHLYPQGLLQQHDQQKQYTSEGRAPSLNSHVGLTPPGTAEDPARSE
VNSVGNNVPHRTLLPPSGAHLNNKSSQQDSPGPGWPQVQLSDGRLQPLSPEQSGPNRETL
PERADGKNKLTCSVCLKEFKSLPALNGHMRSHGGVRTSPNFKQDEGEKPPQQPLPKEVDS
LAPIVMPVSVPVKLLSPEPSTQPSASTTTVKDKPANSMSDDEMPVLVKMTFSPPCSPKVA
NPCSSSEISKKPHPNAAKLEENFKPLPDKKKYRHRPEPLFIPPPSFNFSTSHSGATLYQS
QLRSPRVLGDHLLDRTHELPPYTPPPMLSPVRHGSGLFSSVITSSHSTAHTQLPLTPLTP
TPRVLLCRSSSIDGSVIPVTPGPGEQTVEPRINIGSRFQADIPELQDKLLMEKDVHKATL
VWKPWPELENKVFQQRVEDLLNMSCSSVLPGGGTNSEYALHSLFEAKGDIMVTLEKLLLR
KPVRLKCHPLANYHYAGSDKWTHQERRLFKEALSTYSKDFIFVQKMVKSKTVAQCVEYYY
TWKKILRWGRKHRTRLEKKREECMTSGEEEVLEEDEEIEEDRKEEREMQKSPDPPAIPLV
GPIDLPTLQSLSLSSSSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKPRCTIAGTKQ
KSGTQSGYCSIKSSPAHSTTSGETDPTTIFPCKECDKVFFRIKSRNAHMKTHRQQEEQQR
QKAQKAAVAAEMAATIVRTTGPAGHSLIPLDHMSLVKHVGNVGDIDDDVVQELGGVMEEH
EVMDADLLLDDEDADLLQDDAEL
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcaattgtataaaactaaccatactgccaacagcaatgagaacttatac
taccaacaccaaatgaactcccttccatctctaaatcacagttatgggacatctgttata
gatgctccccaggcgtcccctctctccccccagtttccccaagattcaagagatagtata
gctttgcctgtaggttcaaaaagtcttggatcaatggatacacttagacaaacatggacg
cattctggctcaggaaaccacatcccagtgcggaacaatttgagtaatcaaagctcaatg
tggagcccccttgggcagggggaatctcacgatggataccaatattcttattctcaaccc
agcgaaaatcgatcacaaaaaattaccagtggggtcctgcataaattggactcttttaca
caagtatttgctaaccaaaatctgagaattcaagtcaacaacatggctcaggttttacac
actgagacttcgatggcggataattctggtgacagtgcgctcaggcagctgctgtcccag
aagccagcagttgagcaacagcctgtaacttccagcgtacaaagatatcaaccagtgcca
cagcagacacaccagaattttgcaagcacacagcaaaagcaacaaatgcaagtcatgcag
caccaacagttgtactatgactaccagcagcatttgtcacaaatgcagattcattctgcg
tttcagcaaggacagacgcacgttcaacaaatgcagtcccagcagctcttaccgcaacag
atgcagcacttgcagcaggctcagtactatgctcagccgcagcagggacatcagcgactc
tcaatacatgagatccaacagcagcagcaacagccaactcggcagcagcagcagaggcag
tgtccgatgcaaatagctcagtattaccaaacgcaacctgtcatgcagctacagcaacaa
cagcagcaaatgcaactgcagcttcctccgtatcacagggaacccgatccaaagactgtg
catgaaccccaccagtacccccaggatccgagtcatcctgtgcagctcatccagttggga
gcggcgcctccgtattgctaccaggatccccacgaacagtacaggcatttgtacccccag
ggtttgctgcagcagcacgaccagcagaagcaatacacaagtgagggtagagctccatct
ctgaactcccacgtcggcctcactccaccggggacagcagaggatcctgcgcggtcggag
gtcaattctgtgggtaacaatgtacctcatcgaactcttttgccaccctcaggagcacat
ctgaacaacaaaagctctcagcaggactctcctggccctgggtggcctcaggtgcaattg
tcagatggcagactgcaaccactgtccccagaacaaagtggcccaaacagagaaacactt
cctgagagagctgacgggaagaacaagctaacgtgttcagtatgcttgaaggaatttaag
agtttgcctgctctgaatggtcacatgaggtctcatggaggagtgagaacatctcctaac
ttcaaacaggatgaaggagagaaaccaccacagcagccgctgcctaaagaggtggatagc
ctcgcgcccatcgtcatgccagtgtctgtccctgtaaagcttctgtcacccgaacccagc
acgcagccctctgccagcactaccacagtcaaagacaagcctgccaactctatgtcagat
gatgagatgcccgttctcgtgaagatgactttctctccaccgtgcagtccaaaagtggcc
aacccctgctcatcctctgaaattagcaaaaaacctcatccaaatgctgcaaaattggaa
gaaaacttcaaaccattaccagacaagaagaagtatcggcacagacctgaacctctcttc
atacctcctccttccttcaacttcagcacgtcccactctggtgccacgctgtaccagagc
cagcttcgctctccccgtgtccttggagaccatttgctggaccgaacacacgagctcccc
ccctacactccaccgccaatgcttagtcctgttcggcatggatctggtctcttcagtagt
gttatcacatcatctcatagcaccgcgcacactcagctgccgctcactccactgacacca
actccacgggtgctcctctgtcggtccagtagcattgatggaagtgtaattccagtgacg
cctgggcctggtgaacagactgttgaaccacgaattaatattgggtccaggttccaggcc
gatattcctgagcttcaggacaaactgctgatggagaaagatgtgcacaaggctactctg
gtttggaaaccgtggcccgaactggagaacaaagtcttccaacaaagagtggaagacctc
ttaaatatgagctgttccagcgtgttacctggtggaggaactaactcagaatatgctttg
cactctctctttgaggcaaaaggagatattatggttactcttgagaagctgctgttgagg
aagccagtgagattgaagtgtcatcctttggcaaattaccactatgctggctccgacaaa
tggacacatcaagaaaggaggctgttcaaagaggcattgtccacctacagcaaagatttt
atatttgtacagaaaatggttaagtctaagacagttgcacagtgcgtggaatactactat
acctggaagaaaatcctgcgctggggacggaaacacagaacgcgtttagagaagaaaaga
gaggaatgcatgacaagtggagaagaggaagtgttagaggaagatgaggagattgaagaa
gacagaaaggaagaaagggaaatgcagaagtctcctgacccaccagctatccctcttgtt
ggacctatagacctgcctacccttcagagtctttcactttcttcatcctctttcatctgt
gaaatgccaaactgtggtgctgtgttcagttcccgacaagcactaaatggccacgctcgc
attcatggaggtacaaatcaggtgacaaagccacgatgcaccattgcaggcactaagcag
aaatctggtacacagagcgggtactgctccatcaagagctcacctgcccacagcacaaca
agtggtgagaccgacccaacaacaatttttccttgtaaggaatgtgacaaagtatttttc
agaatcaaaagccgcaatgctcatatgaagacacacagacaacaagaagaacagcagaga
cagaaggctcagaaagctgcagtggcagcagaaatggcagccactattgtgagaactact
gggccagctgggcatagtttgatccctctggatcatatgagtttggttaaacatgttgga
aatgtcggtgacattgatgacgatgttgttcaggagttaggtggtgtcatggaagagcat
gaagtcatggatgctgaccttttattggatgatgaagatgcagacctactgcaggatgat
gctgagttgtaa
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integrated database retrieval system
