Gallus gallus (chicken): 421595
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Entry
421595 CDS
T01006
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
gga
Gallus gallus (chicken)
Pathway
gga03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
421595 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
421595 (CSTF3)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
421595 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
421595
NCBI-ProteinID:
NP_001012586
CGNC:
8880
Ensembl:
ENSGALG00000011685
UniProt:
Q5F4A0
LinkDB
All DBs
Position
5:7254515..7298117
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AA seq
718 aa
AA seq
DB search
MSGEGGTGEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVA
QFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKV
HSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE
KSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAP
PGLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKLPDTVDEAVRII
TGGLPEIAVEGNGPVENNAMLNKAVKRSNEDSDDDEEKGSVVPPVHDIYRARQQKRIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgagggaggtaccggcgagcaggctgctgaatatgtcccagaaaaagtgaag
aaagctgaaaagaaactagaagagaatccatatgaccttgacgcttggagcattctcatt
cgagaggcacagaatcaacctatagacaaagcacggaagacctatgaacgccttgttgcc
cagttccccagttctggcagattctggaaactgtacattgaagcagagattaaagcaaaa
aattatgacaaagtggaaaagttatttcagcgatgccttatgaaagttttacacattgat
ttatggaaatgttacctttcctatgtacgtgaaaccaaggggaagctgcctagttacaaa
gaaaaaatggctcaggcatatgattttgctctggataagattggcatggaaatcatgtca
taccagatctgggtggattacatcaattttttgaagggcgtagaagctgtaggatcttat
gcagaaaaccagaggataacagctgtccgtagggtgtaccagcgtggctgtgtgaatcca
atgattaacatagaacagctctggagagattataacaaatacgaagagggaatcaatatt
cacctagcgaagaagatgattgaagacaggagtagagattacatgaatgcacgacgtgta
gcaaaggaatatgagacggtcatgaaggggttggaccgcaacgccccctctgtccccccc
cagaacaccccacaggaggctcagcaggtggacatgtggaagaagtacatccagtgggag
aagagcaatcctctgcgtacagaggatcaaactctcatcacaaaaagagttatgtttgcc
tatgagcaatgccttttggttctgggacatcacccagatatctggtatgaagctgcacag
tatcttgagcaatctagtaagctgctagctgaaaaaggggacatgaacaatgctaaactt
ttcagcgatgaggctgctaatatttatgagagagccatcagcactttactaaagaagaat
atgcttctctattttgcatacgcagattatgaagagagtcgaatgaagtatgagaaagtg
cacagcatatataaccggctcttggctattgaagacattgatcccactctggtctatatc
caatatatgaaattcgcaaggcgagcagaaggcataaaatctggaagaatgatatttaaa
aaggcaagagaggacacccggacccgccaccacgtctacgttactgctgctctaatggag
tattactgcagtaaggataagtctgtggcctttaagatttttgagctagggctgaagaag
tacggagacattccagaatacgtgctggcatatatcgactacctgtctcaccttaatgag
gacaacaacacaagagttttgtttgagcgcgttttgacttcagggagcctcccacctgag
aaatcgggggaaatctgggctcggtttctagcttttgaaagtaacattggtgaccttgcc
agtatcctgaaagttgaaaaacggaggtttacagcattcaaggaagaatacgagggtaaa
gaaacagctctgcttgtagacaggtataagttcatggacttgtacccttgctctgcaagt
gagcttaaggctcttggttataaggacgtttcccgtgccaagttggcagctataattcca
gaccctgtggttgcgccgtccattgtgcctgttctcaaagatgaagttgacagaaaacct
gaatatcccaaaccagacactcagcagatgattccatttcagccacgacacttagcacct
ccaggtttacatcctgtaccaggaggtgtatttcctgttccaccagcagctgtagtccta
atgaagctcctgccacctcctatttgttttcagggtccctttgttcaagtggatgagctc
atggagatatttagaagatgcaaactgccagacactgttgatgaagccgtacggataatt
actggaggcctgcctgaaatagccgtggaaggcaatggacctgtggaaaacaatgctatg
ctcaataaggctgtcaagagatcaaacgaggattctgacgacgatgaggagaaaggttca
gtagttccccctgtacacgacatttacagagcacggcaacaaaagagaatccggtga
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