Gallus gallus (chicken): 421929
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Entry
421929 CDS
T01006
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
gga
Gallus gallus (chicken)
Pathway
gga03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
421929 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gga03021
]
421929 (CPSF3)
03019 Messenger RNA biogenesis [BR:
gga03019
]
421929 (CPSF3)
Transcription machinery [BR:
gga03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
421929 (CPSF3)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
421929 (CPSF3)
U7-dependent histone pre-mRNA processing factors
421929 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
421929
NCBI-ProteinID:
XP_015131562
CGNC:
12295
Ensembl:
ENSGALG00000016424
LinkDB
All DBs
Position
3:96191145..96209091
Genome browser
AA seq
691 aa
AA seq
DB search
MAKRKAEALIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALP
YIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVS
NISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKL
LYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGG
RGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIR
KQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVII
AGYCVEGTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHV
ILVHGEQNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADKK
PEQGQRISGILVKRNFNYHILSPCDLSNYTDLAMSTVTQTLAIPYTGPFNLLFYQLQKLT
GDVEEIEIQQKPALKVFKSITVIQEPGMVVLEWVANPANDMYADTVTTVILEVQSNPKIQ
KAAVHKVSTKVDMEEYRKRMEMMLQDMFGEDCVSSKEGSILCVTVDGKTANLSLETRTAD
CEPGSEDDESLREMVELAAQRLYDALSPVYC
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcggaaagcggaggccctgatcccggcggaggagagcgaccagctgctcatc
cggcccctaggagctggccaagaagtaggaagatcgtgcattattctggagtttaaagga
aggaaaataatgcttgattgtggcatccatcctggactggaaggaatggatgctcttcct
tacattgacttgatagaccctgctgagattgacctcctcctgattagccatttccattta
gatcactgtggagccttgccatggtttttgcagaaaacaagttttaagggaaggacgttt
atgactcatgccacaaaagctatttacagatggcttctttcagactatgtcaaagtcagt
aatatatcagctgatgacatgctgtatacagaaacagacctcgaggaaagcatggacaag
attgaaaccatcaactttcatgaagtgaaggaggtggcaggcatcaagttctggtgttac
catgcgggccacgttctgggagcagccatgttcatgattgaaatagctggtgtgaagctt
ttgtatacaggtgatttctcaagacaggaagacagacatctgatggcagctgagattccc
aatattaaacccgatattcttataattgaatccacctatgggactcatattcatgagaaa
agggaagagcgagaggcacggttctgcaacaccgttcatgacattgtaaatagaggaggg
agaggtcttattcctgtgtttgccctgggccgggcacaagagctacttttaattttggat
gaatactggcaaaatcatccggagctccacgacatccccatttactacgcctcctctttg
gcaaagaaatgcatggctgtttatcagacatacgtcaatgccatgaatgacaaaatccgc
aagcaaatcaacatcaacaatccatttgttttcaagcatattagcaatttgaagagtatg
gatcactttgatgatattggcccaagtgttgtgatggcttccccaggtatgatgcagagt
ggcttatccagagagctgtttgagagctggtgcacggataagagaaatggagtaattata
gctgggtactgcgttgaaggaacgctcgctaagcatatcatgtctgaacctgaagagatc
acaaccatgtcagggcaaaaacttccgctgaagatgtctgtggattacatttctttctct
gctcacacagattatcaacaaaccagtgagtttatccgggccctgaaacctccacatgtg
attttagttcatggtgagcagaacgaaatggccagattgaaggcagcattgatacgggaa
tatgaggataacgacgaagtccatatagaagttcataatcctaggaatactgaagctgtg
acattaaacttcagaggagaaaaacttgccaaggtgatggggtctttagcagataagaag
ccagagcaaggacagagaatttctggaatcctggtcaaaagaaattttaactatcacatc
ctttctccatgtgacctctccaattatacagacttggctatgagcactgtaacacagaca
ctggctattccgtatactggccctttcaatctgctcttttatcagctgcaaaagcttact
ggtgacgtagaagaaatagaaatccaacaaaaaccagccctgaaggtcttcaaaagtatt
actgtaatccaggagccgggcatggtagtcctcgagtgggtggcaaatcctgctaatgat
atgtatgcagacaccgtgaccacagtgatactggaagttcagtcaaatcctaaaatacag
aaagctgcagtgcataaagtttccacaaaagtagacatggaagagtatcgcaagagaatg
gaaatgatgcttcaggatatgtttggagaagactgtgtaagttcaaaagaaggctctatt
ctgtgtgtcacagtagatggcaagactgcaaacctttcactggaaactcggactgctgac
tgcgagccaggaagtgaagatgacgaatccctgcgtgaaatggtggaactggctgcacag
aggctctacgatgccctcagcccagtatactgctga
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integrated database retrieval system
