Gallus gallus (chicken): 421933
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Entry
421933 CDS
T01006
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gga03021
]
421933 (TAF1B)
Transcription machinery [BR:
gga03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
421933 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
zf-RRN7
DUF5816
Motif
Other DBs
NCBI-GeneID:
421933
NCBI-ProteinID:
NP_001006416
CGNC:
12304
Ensembl:
ENSGALG00000016437
UniProt:
Q5ZJR9
LinkDB
All DBs
Position
3:96396220..96441052
Genome browser
AA seq
582 aa
AA seq
DB search
MDEEDAGDFNERCAQCSEVNWGLTDGGRFYCRTCHNVIERTREVVSTDVIPNARVQTISK
GSRSQKKTDEGWEWYVCEGFQLVLKQQAEALEALGVCPQMKDEVLCNFWRRYLQKSQQAY
CNRPAGETIKALSVCDSSTDMDSEPEQHSLLHFLSVSEIDGDLQTDCSYASSAGKVSEST
SVCSGSVDGSLYVRKNRKEKLRMSMPMTLSFCYMALLWLKEPMTLSDLLRFVVEGHIPYF
NAYQHFPEKMKLYGLDLRIFCVESWPVYEEVYNKMVELAAFLDLPRFPDITDNCFLHPDV
LCMKYLMEANLPDELHNWTCRLVKKTSIGEVDFLTLTPGNKSTRKVKYDVLAAAVIVVVL
KLLFLLDDHYEWLLSDFSAEGNKNNKEGEGGPYFEFKKWYRVIKCTLDVEQKKLDEEKAK
YLWKCEKPLFYSVKKKSKILRRRQMVENLQNQFGKLSGSVQPAGRPNPSSFLLSWSEEST
DGSCFHGHSLKGILQEKHGLLTAINTDYWLCTDKLCNEKLCGHLAHYREEDFPKSYHFVL
RLFSFLLRIQPSSIHEEVCAIEHKLFNKKLYKKPKRKRSLRK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaggacgcgggagattttaatgagcgctgtgcgcagtgttcagaagtaaac
tggggtctcaccgatggaggcagattttattgcagaacttgccacaatgttattgagaga
actcgagaagttgtaagcactgatgttattcctaatgcaagagtccagacaatctccaaa
ggctctagaagtcagaaaaaaactgatgaaggctgggaatggtatgtttgtgaaggcttt
cagctggtactaaagcaacaagctgaagctttggaagcattaggagtgtgtccacaaatg
aaggatgaagttctgtgcaatttttggaggcgttaccttcagaagagccagcaggcatat
tgcaacagaccagctggtgaaactatcaaggcattatcagtatgtgatagcagtacagat
atggacagtgaaccagagcaacacagcctgcttcattttttatccgtctctgaaattgac
ggagatctacagacagattgcagctatgcctcatcagctggcaaggtctcagaaagcacc
tctgtatgctctggatcagtagatggtagcttgtacgtaaggaagaaccgaaaggagaaa
ctgaggatgtcaatgccaatgaccctttcgttttgttacatggcattactctggctgaaa
gaaccaatgacgctatctgatctcttaaggtttgttgttgaaggtcatattccatatttc
aatgcttatcagcactttccagagaagatgaagttatatggccttgatcttaggatcttt
tgtgttgagtcatggcctgtatatgaagaagtctacaacaaaatggttgaacttgcagcg
tttttagacctgcctcgttttccagatataacagacaactgctttctgcatccagatgtg
ttgtgcatgaagtacttgatggaagctaatttacccgatgaattgcacaactggacttgt
cgtctggtgaaaaagacttctattggagaagtggatttcctcactctcacgcctggaaat
aaatcaacaaggaaagtgaaatacgatgtccttgcagcagcagttattgtggtggttcta
aagttactgtttctattagatgatcactacgagtggttgctctcggacttctccgcagaa
ggaaataaaaataacaaagaaggtgaaggtggtccgtatttcgagttcaaaaagtggtac
agggttatcaaatgtaccttggatgtggagcaaaaaaaactggatgaagaaaaagccaag
tatctgtggaaatgtgaaaagccactgttttattcagtcaagaagaaatctaaaatcctt
aggagaagacagatggtggagaacttgcaaaatcagtttggcaagctgtctggttcggtg
caacctgcaggaaggccaaatccatcgagttttctgttaagctggtctgaagaaagcaca
gatgggtcttgttttcatgggcacagcctgaagggaattttgcaagaaaaacatggttta
cttacagccatcaacactgactattggctttgtacagataaactgtgcaatgagaaattg
tgtggtcacctggctcactacagagaagaggactttcccaagagttaccattttgtactg
agacttttctcctttcttctgaggatacagccctcctccatccacgaagaggtgtgtgcg
atagaacacaaactctttaataaaaaactctataaaaagccaaaacgcaaaaggagccta
aggaagtaa
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