Gallus gallus (chicken): 422319
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Entry
422319 CDS
T01006
Symbol
EPFIP1L
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
gga
Gallus gallus (chicken)
Pathway
gga03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
422319 (EPFIP1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
422319 (EPFIP1L)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
422319 (EPFIP1L)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
422319
NCBI-ProteinID:
XP_025005712
CGNC:
51702
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All DBs
Position
4:12143848..12169403
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AA seq
558 aa
AA seq
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MATELEPPAAGAVSGGAPLEAEEDEEHWLYGDDTTGKQEDGPTSGHAESSHPLQDAPQEN
RPVGSEDREVSQHALPSGEDDEEDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTG
RGYGASASAKLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEE
TWKAYCEKQRRLQLGLDPAPPISAENKITVQQGRTGNAEKEVENNIIKTEFKTDFLALVG
GRMKAGPPPNRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPPQQ
PQQPAQPQQPPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPI
PGLFPPPLAPPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTV
DKGASGSGSSHWEYSGSRRERERERDRERDRDRTPTTSEYNTEDERYRYYGRERSYDFER
DYRRSRDRSREREDRHRERRHRDKEESSKHKSSRRKQHESEEGESHRRHKHKKNKRSKEE
KETSEDGTQEGEEQDSKE
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgagctggagccgccggcggccggggccgtgtcgggcggggcgccgctggag
gcggaggaggacgaggagcactggctgtacggcgatgacaccactggtaagcaagaagac
ggaccaacttctggacatgcagaatcttctcatcctctgcaagatgctcctcaggagaac
cggcccgtcggcagcgaagaccgagaggtgtcacagcatgcccttccaagtggagaagat
gatgaagaagacagtgatagtgacagtgatgatgacgacgtgaaagttacgattggcaat
attaaaacgggagcaccatcatacatgggaactcctatgaatctaaacttaaaaacgggt
agaggctatggagcatcagcttcagccaagttgcagcccaaaggtattgatttagatgcc
gcagggaatataaatggattgcctgttatagaagtggatttagattcatttgaagacaaa
ccatggaggaaaccaggtgctgatctttctgattactttaattacggattcaatgaagaa
acgtggaaagcttattgtgaaaagcagcggcggctccagcttgggctggatcctgctcct
cccatcagcgctgaaaataagatcacggtccagcaaggaagaacaggaaatgctgaaaaa
gaagtggaaaacaatatcatcaaaacagaattcaaaacagacttcctggctctagtggga
ggacgcatgaaagctggccctcctcctaataggaagctgggtgggacaattgatgtgatc
ggtggccaggcaggcacaattaggagagtggaaggaagacgacgtgataagcatgcctct
gaagaaaatccaattcaggttctcggggatcatggaagcaagccccagccccctcagcag
ccccagcagccagcgcagccgcagcagcctccccagcagcagccctttgctcccccagcc
ggtccaccaccacccccactcgccggacctccgccgccgcacttcctgcaccctcctcca
cctgtcacctctgtgccaccaccgctgcaccctccaggtttgccaccacccggtccaatt
ccagggctgttcccgccgcctctggcaccaccgccagctctcctcatcccaacgctggat
gggcagccagccagctacaacaacagacagccccctccgtttggctacaactctgcagac
tcgggtttcatcagctacccacccatctccacgtcccacacgccctgggtgaccacggtg
gacaaaggcgcgagcggctctggcagcagtcactgggagtactccggctcacggcgcgag
cgggagcgggaacgggacagggaacgggacagggaccgcacgcccaccaccagcgagtac
aacaccgaggacgagcggtaccgctactacggccgggagcgcagctatgactttgagcgg
gactaccgccggagccgggaccgcagccgggagcgggaggaccgtcaccgggagcgcagg
caccgcgacaaggaggagagcagcaagcacaagtcctcgaggcgcaagcagcatgagagc
gaggaaggggagagccatcggcgccacaagcacaagaagaacaagcgcagcaaggaggag
aaggagaccagcgaggatggcacccaggagggagaggagcaggacagcaaggagtga
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integrated database retrieval system
