Gallus gallus (chicken): 422331
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Entry
422331 CDS
T01006
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X3
KO
K10779
transcriptional regulator ATRX
Organism
gga
Gallus gallus (chicken)
Pathway
gga04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
422331 (ATRX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gga03000
]
422331 (ATRX)
03036 Chromosome and associated proteins [BR:
gga03036
]
422331 (ATRX)
Transcription factors [BR:
gga03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
422331 (ATRX)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
422331 (ATRX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
422331
NCBI-ProteinID:
XP_004940854
CGNC:
51707
Ensembl:
ENSGALG00000007843
UniProt:
A0A8V0YKR8
LinkDB
All DBs
Position
4:complement(12806284..12883792)
Genome browser
AA seq
2380 aa
AA seq
DB search
MTAEPMSESKLNTLVQKLHDFLAHSSEESEDTNSPPASSKTKSIGKSREPERSPASMENN
REEGGSSSERVTFLGSSRSKRKPTVVTKYVGSDDEQVLDETVNEDNSNENSENDVDMKSL
PKEEGLHGIVSCTACGQQVNHFQKDSIYRHPTLKVLICKTCYKYYMSDDISRDSDGMDEQ
CRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTILDENNQWHCYSCHPEPLLDLVTA
CDSVFENLEQLLQQNKKKTKVESEKSKIYDNTVKFSPKRNNSNCNGEEKKLDDSYSGSLT
YSYKALMVPKDMLKKTKKLVETTANMNSSFVSFLKKAAENSEVSPAVQLRQLKAFRSVLG
DIKKAHLALEEGLNLEIQALDVKIKEKNTKEKKTDVRSEKNEVKKDEGKEHVASKGDDTV
KMQKKVVSEQPDNEPMDQDVSTVGKKDSRRTSGEDKRSGTNEEPQYEPNSTEALDMDIVS
VPSSVPEDIFETLESAMEVQTAADEQGNGNTGTDHENPNIKLTTPLKDTKGSKLKASAKG
TKELIVKLTPVSLSESPVKSEDHDSSLEKGSKDERTEKCDSVNQSSNADSERSTENETLS
LAEESDLRRSPRVKTTPLRRQTDVNPLTSNSEEDSNDTSNEKRKRRSSKQSRRKKDKRNS
SDSTVDGPRPNKLCKSKKPAILDNSSDSDEMPAVLKEVAMMSRSSSDIDSNSELPGKDQK
TSNVLKDQPVMDENGKRKRKSSSSGSDLDAKRGKSAKNSATAKKKRQNYSDSSNYDSELE
KEIKHLSKIESAKKAKKRYSRKEDSYDSSEEEQRKKVSKRKVDLKKRKGKSSEDDAAEKS
SPEKEINHSSEDKKASVGSIAKEKLKKNLKKEALKGKHDESSDAEKSLLEKEESSPKGVK
LTEAKKNKDFKKKVQEDSSSESTEKYTEKEHTFDSSKEKFKNKKKSENKEKKSENLKQKI
FKKEQEDSSSDVEKSSPEKGSCNSSENEKTKNETMVKERKRRNLRERVPKRVQIDLSSDA
DKSPLKEESSSEDAVQSKKRPEAKEKKKISHKKKITKKEQNESSSSDEESYEDKKKKIKK
GSVKENKRSNLTEKKKVSKKVIVSSSSSSDKEENDEQNSTGDGSSDEQKIMPVTENLMLS
AGTGFCQSSGDEGETKSRTVPMEEEEDDDDDDPENRIAKKMLLEEIKANLSSDEDASSDE
ESDEGKKKTGKQTENTGDDEENEKEDNSESNSEEEDSKKPRYRHRLLRHKLTVSDGESGE
EKKGKPKETKEGKRRNRRKVSSDDSNDSEFHESAVSEEVSESEDDQRPRTRSAKKAEAEE
NQRSYKQKKKRRRIKVPDDSSSENNNKSNSEDEENDDSKSPGKGRKKIRKIIKDDKLRTE
TQNALKEEEERRKRIAEREREREKLREVIEIEDASPLKCPITTKLVLDEDEETKEPLVQV
HRSIVTRLKPHQVDGVQFMWDCCCESVKKTKTSPGSGCILAHCMGLGKTLQVVSFLHTVL
LCDKLNFRTALVVCPLNTALNWLNEFEKWQEGLEDDEKLEVCELATVKRPQERSYMLQRW
QDEGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVS
KAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADS
TLVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKYEYVLEVRMTPIQCKLYQYYLD
HLTGVGGGNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDDFIA
SDSDETSMSLSSDDYAKKKKSKGKKGKKECSSSGSGSDNDVEVIKVWNSRSRGGGEGNAE
ELGNNPSLVVKSEEGKATSSSNPGSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAE
ELGDKVLVFSQSLISLDLIEDFLELANREKTDKEKPPIYKGEGKWFRNIDYYRLDGSTTA
QSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVY
RFGQSKPVFVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEP
DLLDDPNSEKKKKRDTPMLPKDTILAELLQINKEYIVGYHEHDSLLDHKEEEELTEEERK
AAWAEYEAEKKGLTMRFNMPTGTNMLPTNFNSQTPYIPFNLGALSAMSNQQLEDLINQGR
EKVVEATNSVTAARIQPLEDIISTIWKENVTLTESQVQALALSRQASQELDVKRREAIYN
DVLTKQQMLISCVQRILMNRRLQQQYNQQQQQHMSYQQTAMSHLMMPKPPNLIMNPSNYQ
QIDMRGMYQSVSGGMQPPPLQRAPPPMRGKNAGPSQGKSM
NT seq
7143 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcagagcccatgagtgaaagcaagttgaatacattggtgcagaaactccatgac
ttcttggctcactcatcagaggaatctgaggacacaaactctcctccagcatcatctaaa
accaaaagcataggtaaaagtagagaacctgaaagaagtccagcctcaatggagaacaac
agagaagagggtggtagttcttcagaaagagtcacattcttaggatcgtcacgttcaaaa
aggaaacctacagttgttacaaagtatgttggatcagatgatgaacaagtcttagatgag
actgtaaatgaagataattcaaatgaaaactcagaaaatgatgttgatatgaaaagcttg
cctaaagaggaaggactacatggaattgtaagctgtacagcttgtgggcaacaggtgaac
cattttcagaaggattcaatctatagacatcctacattgaaagttcttatttgtaagaca
tgctacaagtattacatgagcgatgacattagccgtgattcagatggaatggatgaacag
tgtaggtggtgtgctgaaggtggaaatctgatttgctgtgacttttgccataacgccttc
tgtaaaaagtgcattttgcgcaacctgggtagaaaggagctatcaactatactggatgaa
aataaccagtggcattgctacagctgtcatccagagcctctattggacttggtcactgct
tgtgacagtgtttttgaaaatttagaacagttactgcaacagaacaaaaaaaagaccaaa
gttgaaagtgaaaaaagtaaaatatatgacaatacagtcaaattttctccaaagagaaat
aattcaaactgtaatggtgaagaaaaaaaactagatgattcatattcaggttcactaaca
tattcttataaagccctaatggtgccaaaagacatgcttaagaaaacaaaaaaactggtt
gagactacagcaaatatgaattccagctttgtgagctttttgaaaaaggctgcagaaaat
tcagaagtaagcccagccgtgcaacttcgtcagctaaaagcttttagatctgtgctgggt
gacatcaaaaaagctcatctggcactagaagaaggtctgaacctggagattcaagctttg
gatgttaaaatcaaagagaaaaataccaaagaaaaaaaaactgatgttagatcagaaaaa
aatgaggtgaagaaagatgaaggaaaggaacatgtggcatcaaaaggggatgacactgta
aagatgcagaaaaaagttgtatcagaacagcctgacaatgagccaatggatcaagatgtt
tcgacagtaggaaaaaaagacagcagacgtacaagtggtgaagataaaaggtctggcaca
aatgaggagcctcagtatgaacctaatagtacagaggctttagatatggatatagtgtct
gttccctcatctgttcctgaagatatttttgagactctagaatctgctatggaagttcag
actgcagcggatgagcaagggaatggaaatactggaacagatcacgagaatccgaatata
aaattgaccactcctttgaaagatactaagggatctaaactgaaagcatcagctaaagga
accaaggaattgattgtgaaattgactcctgtgtccctttcggagtctccagttaaatct
gaagatcatgacagcagtctagaaaagggaagcaaggatgaaagaacagaaaaatgtgat
tctgtaaaccaaagtagtaatgctgatagcgaacgttccacggagaatgaaactctctca
cttgcagaggaatctgatctcaggagatcaccccgtgtgaagaccacacctctgaggcgc
caaacagatgttaatcctttaacatcaaattcagaagaagatagcaatgacacaagtaat
gaaaaacgaaagagaagatcatcaaaacaatcaagaaggaaaaaagataaaagaaactct
tctgacagtacagttgatggtcctaggcctaataaactttgtaaatcaaaaaagccagct
atattagataatagttctgactctgatgagatgccagctgttcttaaagaagtagctatg
atgagtcgcagttcttcagatattgacagcaatagtgaattaccaggaaaagaccagaag
acttcaaacgttctgaaggatcaaccagtaatggatgaaaatggaaaacggaaaagaaaa
agttccagttctggttcagatttagatgccaaaaggggcaaatcagctaagaattctgct
acggcaaaaaagaagcgacagaactattcagattcttcaaactatgattctgagctagaa
aaagaaattaaacatttgagtaaaattgagtctgcaaaaaaagctaagaaaagatactca
cgaaaagaagatagctacgattcttctgaagaagagcagaggaagaaagttagtaagaga
aaggtagatctgaagaaacggaaaggtaaatcttctgaggatgatgctgctgaaaagtca
tctccagagaaggagattaatcattcatctgaagataaaaaagctagcgtggggtcaatt
gctaaggaaaaactaaagaaaaacttgaaaaaagaagctttaaagggtaagcatgatgag
tcttctgatgctgagaagtctttactggagaaagaagaaagtagtcctaaaggtgttaag
ctaactgaagctaagaaaaacaaggattttaagaaaaaggtacaagaagattcttcttct
gagagtactgagaaatatacagagaaggaacacacttttgattcttcaaaagagaaattc
aaaaataaaaaaaaatcagaaaacaaagagaagaaatcagaaaatttgaaacagaaaatc
ttcaagaaagaacaagaagattcctcttctgatgttgaaaagtcttcccctgagaaggga
agctgtaattcttctgaaaatgagaagactaagaatgaaacaatggttaaagaaaggaaa
aggaggaatttaagagagagagtacctaaaagagtacagattgatttatcttctgatgct
gacaaatctcccctgaaagaggagagttcttctgaagatgctgtgcaaagtaaaaaacga
cctgaagcgaaggaaaagaaaaaaataagtcacaaaaagaaaattaccaagaaagagcag
aatgagtcgtcctcttctgatgaggagtcttatgaagacaaaaagaaaaagattaaaaaa
ggatccgtgaaagaaaataaaaggagtaacttaacagagaaaaagaaagtgtcaaaaaag
gttattgtctcttcctcgtcctcatctgataaggaagaaaatgatgagcagaattcaaca
ggtgatggaagcagtgatgagcagaaaattatgccagtgactgaaaatttaatgctgtct
gctggtacaggattttgtcagtcgtcaggagatgagggagagactaaatcaaggactgtt
ccaatggaggaggaggaagatgatgatgatgacgatcctgagaatagaattgccaagaaa
atgcttttagaagaaatcaaagccaatctttcctctgatgaggatgcatcttctgatgaa
gagtcggatgaaggaaaaaagaaaacaggaaagcaaactgaaaacacaggagatgatgaa
gagaatgagaaggaagataattctgaatcaaattcagaggaagaagactcaaagaagccc
agatacagacacagactgctgaggcacaaactgacagtgagtgacggagaatctggtgaa
gaaaagaaggggaaacctaaagaaacaaaagaggggaagcgcagaaatagaaggaaagtg
agcagcgatgattcaaatgactcagagtttcatgaatctgcggttagtgaagaagtcagt
gagtctgaagatgaccagcgtccaagaacaagatctgccaagaaagctgaggcagaagaa
aatcagcgcagttacaaacagaaaaagaaacgaagacgtataaaagttccagatgattct
tcaagtgaaaacaacaataagagtaattctgaagatgaggaaaacgatgattcaaaatct
cctggaaaaggcagaaagaaaattaggaagattattaaagatgataagcttagaacagag
acacaaaatgcacttaaagaggaagaagaaagaagaaaacgtatagcagaaagagaacgg
gagagagagaagttgagagaggtgatagagatagaagatgcttcacctctgaaatgtccc
attacaactaagctggttttagatgaagatgaagaaacaaaagaaccattagtgcaggtt
cacagaagtatagttaccagactgaaaccacaccaagtagatggtgttcagttcatgtgg
gattgctgttgtgaatctgtaaaaaagacaaagacatctcctggttctggatgcattctt
gctcactgtatgggtctggggaagacattacaggtagtaagctttctgcacacagtcttg
ctgtgtgacaagctgaatttccggacggcgcttgtagtgtgtcccctgaacactgccttg
aactggttgaatgagtttgaaaaatggcaggaaggtttagaagacgatgagaaattagag
gtctgtgaattagcaactgtgaaacgccctcaagagagaagctatatgctgcagcgttgg
caagatgaaggaggtgtgatgataataggctatgagatgtatcgtaatcttgcacaaggc
aggaatgtgaagagtagaaaactgaaagaaatatttaataaagctttagtagatccaggc
cctgactttgttgtttgtgatgaagggcacatattaaaaaatgaagcatctgctgtttct
aaggcaatgaattcaattcgttctaggagaagaataattctgacaggaacaccactgcaa
aataatcttatagaatatcactgcatggttaactttattaaggagaatttgcttggttca
attaaagaattccgaaatcgatttataaatccaattcagaacggtcagtgtgcggactcc
actctggtagatgtcagagtaatgaagaagcgggcacatattctctatgagatgttagct
ggatgcgttcagaggaaagattacacagcattaacaaagttcctcccaccaaaatatgag
tatgttctagaagttagaatgacacctattcagtgcaagctctaccagtattacttggat
catttgacaggtgtaggtggtggcaatgaaggtggacgaggcaaagctggagctaaacta
ttccaggatttccagatgttgagcagaatctggactcatccctggtgtttgcagctggac
tatattagcaaagaaaataagggctactttgatgaagacagtatggatgacttcatagct
tcagattccgatgaaacttcaatgagtttaagttctgatgattatgcaaagaaaaaaaaa
tccaaggggaaaaaagggaagaaagaatgtagttcaagtgggagtggcagcgataacgat
gttgaagtcattaaagtctggaattcaagatctcgtggaggtggagaaggaaatgcagaa
gaacttggaaacaacccttcattagttgtgaaatcagaagaaggtaaagctacttcctca
tccaatcctggtagcccagccccagactggtacaaagattttgtcactgatgctgatgct
gaggtgttggaacactctgggaaaatggttcttctctttgaaattcttcgaatggcagag
gagcttggggacaaagtcctagtgtttagccagtccctaatatcattggatttgatagaa
gattttctggagctggctaacagagagaaaactgacaaagagaagcctcctatctataaa
ggtgaaggaaaatggttccgaaacattgattactatcgcttagatggttcaactacagct
cagtcaagaaagaaatgggctgaagaatttaacgatgaaactaatgtgagaggccgtttg
tttattatatccactaaggcaggttcccttggaattaatctcgtggctgctaatagagta
atcatctttgatgcttcttggaacccatcatatgatatccagagtattttcagggtctac
cgctttgggcagagcaaacctgtgtttgtgtacagatttttggcccagggtacaatggaa
gacaaaatctacgatcggcaggtaacaaagcagtcactgtctttccgggttgttgaccag
cagcaagttgaacgtcattttaccatgaatgagcttacagagctgtacacttttgagccg
gatttgctggatgatcctaattcagaaaagaaaaagaagagggatacaccgatgttgcca
aaagatacaatcttggcagaattgctccaaatcaataaagagtatatagtagggtatcac
gagcatgattcactcctggaccataaggaggaagaggagctcactgaagaggaaaggaag
gcggcctgggcagaatatgaagcagaaaagaagggcttgaccatgcgtttcaacatgccg
acagggaccaacatgcttcccactaatttcaactctcaaacaccatatattcctttcaat
ttgggcgctctgtcagcgatgagcaatcaacagctggaggacctcattaatcaaggaaga
gaaaaggttgtggaagcaaccaacagcgtaactgcagcaaggattcagccccttgaagac
atcatttcaactatatggaaagagaatgtaacgcttacagagagccaagtgcaggccctg
gccctaagtagacaggcaagccaagagcttgatgttaagcgacgagaagccatctataac
gacgtccttactaaacaacagatgttgatcagttgtgttcagaggatacttatgaacaga
agactacagcagcagtacaatcagcagcaacaacagcacatgtcttaccagcaaacagca
atgagtcatctcatgatgccaaagcctccaaatttaatcatgaatccttccaactaccaa
cagatagatatgagaggaatgtatcagtcagtgtctggtggtatgcagccgccgccttta
cagcgagcaccacccccaatgagaggcaaaaatgcagggccttcccaagggaaatcgatg
tga
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integrated database retrieval system
