Gallus gallus (chicken): 422348
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Entry
422348 CDS
T01006
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
gga
Gallus gallus (chicken)
Pathway
gga04510
Focal adhesion
gga04512
ECM-receptor interaction
gga04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
422348 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
422348 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
422348 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gga04147
]
422348 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
gga00536
]
422348 (COL4A5)
Exosome [BR:
gga04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
422348 (COL4A5)
Glycosaminoglycan binding proteins [BR:
gga00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
422348 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
422348
NCBI-ProteinID:
XP_015134091
CGNC:
6170
Ensembl:
ENSGALG00000008141
UniProt:
A0A8V0YLG2
LinkDB
All DBs
Position
4:complement(13901306..13980749)
Genome browser
AA seq
1698 aa
AA seq
DB search
MERRWRSRSPAVGCVVLLLLLLLGCWGPREAAAAACHGCTSVTKCDCSGVKGEKGERGFP
GLEGQPGLPGFPGPEGPPGPRGAKGDDGLPGPIGPKGIRGPPGLPGFPGTPGLPGLPGQD
GPPGPQGIPGCNGTKGERGFPGSPGFPGLQGPPGPPGLPGMKGEAGEIITSLLPGQKGDQ
GFPGLPGIPGPPGSIGIPGPVGPPGPPGLTGPPGPPGLPGPKGNMGLNFQGPKGEKGEQG
LQGPPGPPGQIGEQKRPNDIEFQKGDQGIPGDPGPPGLPGPQGPPGLPGGIKGEKGEQGE
PGKRGKPGKDGEPGQPGRDGLPGGPGVNGVPGRDGEKGEKGDVGPPGPPGSVITRPGIDA
TVGPKGSKGLPGLPGAKGERGFSGRPGPPGLPGSPGITTVGPPGPPGLPGERGQKGDPGL
PGVSIPGQPGLDGPQGPPGPPGPPGPPAPSVPPGEGLCERGPPGPPGIPGQQGFAGERGQ
KGDQGDTCFNCIGTGISGPPGERGPPGPPGSPGSPGFPGPKGEKGLPGLTGLVGPPGFPG
PPGAPGRPGPKGDPGDVLASPRMKGDKGDPGFPGPPGLPGIDGTPGRDGLPGLPGPKGEP
GSVAFKGEMGIPGDPGAPGLPGDKGLPGPPGFGPQGSPGEKGIQGVSGRPGPPGVPGPKG
DPGQTITEPGVPGPPGPPGRNGDPGLPGDPGQPGQRGLSGIPGAKGEPGIPGIGLPGPPG
PKGFPGTPGPPGAPGTPGRPGLDGPPGPPGFPGQKGDRGFGVPGPPGPPGPPGIKGVQGP
KGDPGFPGNPGLPGRAGFDGTPGPKGDPGPSGPPGLPGPPGIPGIGGQGPPGPPGPPGPV
GPPGLQGVPGEKGDPGPPGFDVPGPPGDQGTPGYPGPPGLPGPQGSPGPPGRDGIPGFPG
AKGEMGVMGAPGPPGPPGTPGRSGLPGLKGNNGLPGPPGPPGPLGQKGVKGEAGLPGPPG
TVDPKQLGAKGEKGEPGVPGIPGLSGQKGYQGLPGDPGPPGLSGPPGAPGLPGVKGDMGL
PGQPGPTGPPGLKGAMGEMGLPGPPGSKGSQGIAGRPGQPGPAGFPGLKGEKGDPGLSSI
GIPGLPGPKGDLGLPGYPGSPGSKGIAGNPGLPGLPGSPGAKGEPGLPGFPGTPGIPGPK
GIEGPPGNPGLPGPPGPVGDTGRPGPPGPPGEKGQPGRDGIPGPAGQKGEPGLPGFGRPG
PPGLPGLSGQKGELGLPGPPGPPGLPGLKGEPGFQGFPGLQGPPGPPGLPGPPLEGPKGS
PGPPGVPGRPGPSGPPGSPGPEGPRGPPGSGGLKGEKGNPGQPGPPGLTGQKGDQGPPGR
QGDPGRPGLNGMKGDPGVPGVPGFPGMKGPTGPAGPAGLTGSQGLPGPPGPPGLPGTIGR
SIVVKGDPGPPGPPGLPGSKGPPGLAGPQGLPGPVGVPGDPGRDGLPGFDGPAGRKGERG
LPGQPGSRGIQGPPGPDGLQGPPGPPGTASVAHGFLITRHSQTRDTPLCPQGTSRIYDGF
SLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPM
SMEPLTGQNIQPFISRCVVCEAPAMVIAVHSQTIQIPSCPPGWDSLWIGYSFMMHTSAGA
EGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEVSEMFSKPQSETLK
AGDLRTRISRCQVCMKKT
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggagcggcggtggcggagccgcagcccggccgtgggctgcgtggtgctgctgctgctg
ctgctgctgggctgctgggggccgcgggaggcggcggcggcggcttgccatggatgtaca
tctgtaaccaaatgtgattgcagtggagttaaaggagaaaagggtgaaaggggattccca
ggcttggaaggacagccaggtctgcctgggtttccaggcccagaaggacctcctggtcca
agaggtgcaaagggtgatgatggacttccaggacctattggccccaaaggaatcagagga
ccaccagggcttccgggatttccaggaactccaggacttcctggtttaccaggacaagat
gggccaccaggacctcagggtatcccgggctgcaatggaacgaagggagaacgtggattc
ccaggcagtccaggttttccaggtttacaagggcctcctgggccccctggtctgccaggt
atgaagggcgaagcgggtgaaataattacatccttgctgccaggacagaagggtgaccaa
ggatttccaggtcttccagggatacctggtccacctggttccataggaataccaggtcca
gttggtcctccagggcccccaggtttgacaggacctcctggtccaccaggactgccagga
cctaagggtaatatgggcttgaatttccaaggacctaaaggtgaaaaaggtgaacaaggt
cttcaaggacctccagggccaccaggacaaattggagaacagaagagaccaaatgacatt
gagtttcagaaaggagatcagggtattccaggtgatccaggcccaccaggacttcctggg
ccacaaggccctcctggtcttcccggtggcataaaaggtgaaaaaggtgagcaaggagaa
ccaggcaaaagaggaaagccgggcaaagatggagaacctggtcagcctggtagggatggt
ttacctggtggacctggagtcaacggtgttccaggaagagatggtgaaaagggtgaaaaa
ggtgacgttggtcctcctggccctcctgggagtgtcattacaagaccaggcattgatgca
acagtgggaccaaaaggtagcaaaggattgccagggctcccgggagccaaaggggagcgt
ggattctctggtaggccaggcccacctggcttgccaggttctccagggatcactactgtt
ggacctcctggcccacctggcttacctggtgagagaggacagaagggagatccaggttta
cctggtgtttccattcctggacaaccaggacttgatgggccacagggacctccaggacct
ccaggtcctccaggaccacctgcaccatctgttcctcctggtgaagggttatgtgagcgg
ggtccaccaggtcctccaggaattccaggacaacaaggctttgctggagagagaggccaa
aaaggtgatcaaggagacacatgcttcaattgtataggaactggaatatctgggcctcct
ggtgagagaggaccaccgggacctccaggtagtccaggttctcctggttttcctgggcca
aaaggtgaaaaggggcttccaggattaacaggccttgtagggccaccaggattcccaggg
ccaccaggtgctcctgggagacctggtcctaaaggagaccccggggatgtcttggcttca
ccaagaatgaaaggtgacaaaggagaccctggcttccctggacctccaggtcttcctgga
atagatggcactcctggacgagatggactgccaggtctgcctggccctaaaggggaacct
ggcagtgttgcattcaaaggagaaatgggaattccaggtgacccaggagcaccaggtctt
cctggagacaaaggacttcctggacctcctggttttggtccacaaggttcacctggtgaa
aagggcatccaaggtgtatcaggtcgtccagggcctcctggagttcctggtccaaaaggt
gaccctggtcagactattacagaaccaggagttcctggtcctcctggtcctccaggaaga
aatggtgacccaggtcttccaggggatcctggtcagccaggtcagcgtggcttatcaggc
atcccaggtgcaaagggagagccaggtattcctggcattggacttccaggtccaccaggc
ccaaaaggtttcccagggactccaggcccacccggagctccaggaactccaggtcgccct
ggcctagatggacctcctggaccacctggtttcccaggccagaagggggatcgtggattt
ggagttccaggaccacctggacccccaggaccaccaggcataaaaggagttcaaggacct
aaaggtgatcctggcttcccaggaaaccctggtcttccaggacgggcgggttttgatgga
actccaggacccaaaggtgaccctggaccaagcggaccaccaggacttccaggcccacca
ggcatccccggcattggaggccaagggccacctggacctccaggaccaccaggtcctgtt
ggcccaccagggttgcagggcgtaccaggggagaaaggggatccaggtcctccaggcttc
gatgttcctggtcctccaggtgaccaaggaaccccaggatatccaggaccccctggcctc
ccaggccctcagggttcacccggaccacctggccgggatggaatacctggatttccaggt
gccaaaggtgagatgggcgtcatgggagcccctgggcctccagggcctcctgggactcct
ggaagaagtggccttcctggcttgaaaggtaataatggattgcctggcccaccagggcct
cctggaccattaggacagaaaggtgttaaaggtgaagcaggcctgccaggtccacctgga
acagttgatccaaaacagctaggagcaaaaggagaaaaaggcgagccgggtgttccaggt
attcctggtttatcggggcagaaaggttatcaaggtctcccaggtgacccaggtccacca
ggacttagtggtccaccaggcgcaccagggttgccaggcgtcaagggagacatggggctt
cctgggcagccaggaccaacaggacctccggggctaaaaggtgccatgggagagatgggc
cttccaggtcccccgggaagtaaaggcagtcaaggaatagcaggacgtccggggcagcct
gggcctgctggatttcccggactgaaaggggagaaaggtgatcctggtctttcaagcatt
ggtattcctggtctgcctggaccaaagggcgatcttggtttgcctggatatccaggtagt
ccaggcagtaaaggtatagctggaaatcctggtttgcctggattgccaggcagtccaggt
gcaaaaggagagccgggccttcctggattcccaggaacaccaggaattccaggaccaaaa
ggtatcgaagggcctccgggtaatcctggtctgcctggaccacctgggccagtaggtgat
accggtcgtcctggccctcctggtcctcccggggagaagggacagcctggtcgagatggt
atccctggaccagctggtcagaagggcgaaccaggtctgccgggttttgggcgcccagga
cctccgggactgccaggattatcagggcaaaaaggtgaattggggttacctggcccacca
ggaccccctggacttccaggtctgaagggagaaccaggtttccagggattccctggccta
cagggcccaccaggtccaccaggattaccagggccccctctggaaggtcctaaaggtagc
cctggcccaccaggtgttccaggaagaccaggtccctcaggtcctccaggttcaccgggc
ccagaaggtccacgagggccaccaggcagtgggggactcaaaggggaaaaagggaaccca
ggacagcctggcccacctggcctgactggtcaaaagggagaccaaggaccacctggacgc
cagggagatcctggtcgtcctggtctcaatggaatgaagggtgaccccggggttccaggc
gttccaggattcccaggtatgaagggtcccactggccctgcaggacctgctggcctcacg
ggcagtcaaggactgccaggcccaccaggtccaccaggtttaccaggtaccattggacga
agcattgttgtcaaaggtgaccccggtcctccaggacctccaggattgcctgggtcaaaa
gggccacctggactggcagggccacagggattgccaggtccagttggtgttcctggtgat
ccagggagagatggactccctggttttgacggcccagcaggacgtaaaggagagagaggt
cttccaggccaaccaggttcacgaggaatacagggacctcctggtcctgatggcttacaa
ggcccacctgggcctcctggcacagcttctgttgctcatggattccttataactcgtcac
agccagactagggatacaccactatgtccacaaggaacttcaagaatatatgatggattc
tctcttttgtatgtgcaaggaaatgagagagcgcatggccaggacttgggtactgctggg
agctgtcttagacgttttagcaccatgcctttcatgttctgcaacatcaacaacgtttgt
aattttgcatcaaggaacgactattcctactggctatcaactccagagccaatgccgatg
agcatggagccactgactgggcagaacattcagccattcattagccgatgtgttgtgtgt
gaagctcctgctatggtgatagctgtccacagtcagaccattcagattccttcgtgtcct
ccaggctgggactccctttggatcggttactctttcatgatgcacactagtgctggagca
gagggctccggacaggccttggcatcacctggatcctgtttagaagaattccgctcagct
ccatttattgagtgtcatggtcgaggcacttgtaactactatgccaattcatatagtttc
tggctggcaactgtagaggtgtcagaaatgttcagtaaacctcagtcagagacactgaaa
gctggagacttgaggacgcgtattagtcgctgtcaagtttgcatgaagaagacgtaa
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integrated database retrieval system
