Gallus gallus (chicken): 422358
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Entry
422358 CDS
T01006
Symbol
SMARCA1
Name
(RefSeq) probable global transcription activator SNF2L1 isoform X2
KO
K11727
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 [EC:5.6.2.-]
Organism
gga
Gallus gallus (chicken)
Pathway
gga03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
422358 (SMARCA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gga03036
]
422358 (SMARCA1)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
422358 (SMARCA1)
CERF complex
422358 (SMARCA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
CHDII_SANT-like
AAA_14
DUF7760
UBA_2
Motif
Other DBs
NCBI-GeneID:
422358
NCBI-ProteinID:
XP_040556086
CGNC:
6391
Ensembl:
ENSGALG00000008431
UniProt:
A0A8V0YVN1
LinkDB
All DBs
Position
4:14272711..14301618
Genome browser
AA seq
994 aa
AA seq
DB search
MEQGPAAASARSDGEVPSTSAASAQEPGAEEKNDPPFQLKLPPKAARPEKEVDPEYEEKM
KADRAKRFEFLLKQTELFAHFIQPAAQKSPTSPLKVKLGRPRIKKDEKQSLISAGDYRHR
RTEQEEDEELLSESRKTSNVCIRFEESPSYVKGGTLRDYQVRGLNWMISLYENGVNGILA
DEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDK
DARAAFIRDVMMPGEWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIV
REFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKNCLGDQKLVERL
HAVLKPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKM
RLLNILMQLRKCCNHPYLFDGAEPGPPYTTDTHLITNSGKMLVLDKLLAKLREQGSRVLL
FSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSKFIFMLSTRAGGL
GINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIK
LRLDSIVIQQGRLIDQQSNKLAKDEMLQMIRHGATHVFASKDSELTEEDITTILERGEKK
TAEMNERLQKMGESSLRNFTMDTEMSLYNFEGEDYREKQKLSMMEWIEPPKRERKANYAV
DAYFREALRVSEPKVPKAPRPPKQPNIQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNP
DLPNAAQVQKEEQKKIDESMPLNPEETEEKEKLLTQGFTNWNKRDFNQFIKANEKYGRDD
IDNIAREVEGKSPEEVIEYSAVFWERCNELQDIERIMAQIERGEARIQRRISIKKALDAK
IARYKAPFHQLRIQYGTNKGKNYTEEEDRFLICMLHKMGFDKENVYEELRQCVRNAPQFR
FDWFIKSRTAMSRNILLKVLRGDSTNRSSLGGCK
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggagcagggacccgcggccgcctctgcccgatcggatggcgaagtgccctccacgtcc
gcggcctccgcgcaggagcccggcgccgaggagaaaaatgatcctccgtttcaactcaaa
cttcctccaaaggcagccaggcctgaaaaagaggttgacccagaatatgaagagaagatg
aaagcagatcgtgcaaaaagatttgaattcctcctgaagcagacagaactcttcgctcat
tttatccagcctgcagcacaaaaatcaccaacatctccattaaaagtcaagctgggacgt
ccacggataaagaaggatgaaaagcagagtttgatctcagctggagattaccgtcacaga
cgcacagaacaagaagaagatgaagaactgttgtcagaaagtcggaagacatctaacgtg
tgtattcgatttgaggagtctccttcatatgtgaaaggaggaacgctaagagattaccaa
gtcagaggtctgaattggatgatctccttgtatgaaaatggcgttaatggcattctggca
gatgaaatgggtcttggtaagactctgcaaacaatagcactgttgggctatctgaagcat
tatcgaaacattcctgggccacatatggtcctggttccaaaatcaactcttcacaattgg
atgaatgaatttaaacgctgggttccttcattacgtgctgtttgccttatcggagataaa
gatgccagagctgcttttatccgcgatgttatgatgcctggtgaatgggatgtttgtgtt
acatcatatgaaatggtcattaaagagaaatcagtcttcaagaagtttaactggaggtac
ctggtaattgatgaagcacacagaataaagaatgagaagtctaaactgtcagagattgtc
cgggagttcaagacaacaaacagattgctgcttacagggactcctttacagaataacctc
catgaactgtgggcattgcttaattttcttctacctgatgtctttaattctgcggatgat
tttgactcatggtttgataccaaaaattgtcttggtgatcagaaacttgtagaaagactt
cacgctgttttgaaaccatttttactgcgtcgcataaaggctgaagttgaaaagagtttg
cctccaaagaaagaagtaaaaatttatcttggactcagcaaaatgcagagggaatggtat
acaaggatcttgatgaaagatattgatatcctaaattcagctgggaaaatggataagatg
cgtctgctgaacattctgatgcagttgcggaaatgctgtaaccatccttacctgtttgat
ggtgctgagcccggccctccttacaccactgacacacatctcatcactaacagtggtaaa
atgttagttctggataaactgctggcaaaactcagagagcaaggttccagagtgctactt
ttcagtcagatgacccgtttattggatattttggaagattattgcatgtggcgtgggtac
gagtactgccgacttgatgggcagacaccacatgaagaaagagaggaagcaatagataca
tttaatgctcccaacagcagtaaattcattttcatgctgagtaccagagctgggggccta
ggaattaatttggcaactgctgatgtggttattctctatgattcagattggaaccctcaa
gtagatctgcaagccatggatcgtgcgcatcgtattggtcaaaagaaaccagtacgggtg
ttccgactaatcactgataatactgttgaagagaggattgtagaaagagctgaaataaaa
ctgaggctggactctatagttatacaacaagggaggctcatagaccagcagtctaacaaa
ctggcaaaggatgaaatgctgcaaatgatccggcatggagctacacatgtctttgcttcc
aaagacagcgagttgacggaagaagacataaccactattctagaaagaggagaaaagaag
acagctgaaatgaatgaaagactgcagaaaatgggggagagctctttaagaaatttcact
atggacacagagatgagcttatacaactttgaaggtgaagattatagagaaaaacaaaag
ttgagcatgatggaatggatagagcctcccaaacgagaacgcaaagctaattacgcagtt
gatgcgtatttcagagaagccctacgtgtcagtgaacccaaagtcccaaaggctccgcga
cctccaaaacagccaaatattcaggatttccagttttttcccccgcggttatttgaactt
ctggaaaaagaaattctatattatcgtaagacgataggttataaggttcccaggaatcct
gacctccccaatgcagctcaggtgcaaaaagaagaacaaaagaagatagatgagtctatg
cctctgaatcctgaagaaactgaagagaaagagaaactactaacgcagggctttacaaac
tggaataagagagattttaatcaatttattaaagctaatgagaaatatggtcgtgatgat
attgataatattgctcgtgaggtggagggaaagtcacctgaggaggtcattgagtattca
gctgttttctgggaacgttgcaatgaactgcaggacattgagagaattatggctcagatt
gaacgaggagaggcaagaattcaacggaggatcagtatcaagaaagcccttgatgccaaa
atcgcaaggtataaagcgcccttccatcagttgcgtattcagtatggaacaaacaaagga
aaaaactacacagaggaggaagacagatttttgatctgcatgttgcacaagatgggcttt
gacaaagagaatgtgtatgaggaactaaggcagtgtgtgcgcaacgctcctcagttcaga
tttgactggtttatcaaatccagaacagcaatgagcagaaacatacttttaaaagtgttg
agaggtgacagcactaacagaagcagccttggtggctgcaaataa
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