Gallus gallus (chicken): 422361 Help Entry 422361            CDS       T01006                                  Symbol THOC2 Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism gga  Gallus gallus (chicken) Pathway gga03013   Nucleocytoplasmic transport gga03040   Spliceosome Brite KEGG Orthology (KO) [BR:gga00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     422361 (THOC2)   09122 Translation    03013 Nucleocytoplasmic transport     422361 (THOC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:gga03019]     422361 (THOC2)    03041 Spliceosome [BR:gga03041]     422361 (THOC2) Messenger RNA biogenesis [BR:gga03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      422361 (THOC2) Spliceosome [BR:gga03041]  Complex C   Other components    EJC/TREX     422361 (THOC2)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     422361 (THOC2) SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  422361 NCBI-ProteinID:  XP_040556099 CGNC:  6452 Ensembl:  ENSGALG00000008507 LinkDB All DBs Position 4:15640175..15693024 Genome browser AA seq 1613 aa AA seqDB search MATMLPAEWIKNWEKGGRNEFLQLCRALSEDKSHDSLSFRDIQQALYELSSHVVRGNLKH EHASGVLADIIEFREDMPSILADAFCILDIETSCLEEKTKRDCFTQLVLSCLCKTFSGIQ ELDGQTTLSCRKYLVSDTVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFN LLREENEGYAKLIAELGQDLSGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPE YDDFFVPLIESYMYMCEPQTLCHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLED LYVHLLPGDNAIIEEHKREIVEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDN QKLGLLEALLKIGDWQHAQSIMDQMPPFYATSHKPIAIALCQLVHVTIEPLYRRVGVPKG AKGSPISPLPNKRAPKQADSFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEF QSDGSKQEDKEKMEILFSCVLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRL YGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHANPTILFDYI LSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLA SFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAM TGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHL KLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYA HQISSKYDELKKAEKGNKQQHKVHKYITACELVMAPVHEAVISLHPPKVWDDISPQFYAT FWSLTMYDLAVPHSSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEK KQLEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELV HQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKE CGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNI LIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPE NEFHHKDPPARNAVAATVQNGPGGAGMPTSLTINTAKLEESAAEETDKLKEKSQGTVKVI NKTVNATPKVTTSNGNSASNSKIIKEKDDKEKSGKEKDKEKKEKIPATTPETKALGKDGK DKPKEERANKDDKPREIKEKTPKSDKEKEKAKKEEKASKEEKSKTIVTTIESKSVAEKER EKEPSREKDVAKDMKSKENTKGGEKIPVAGSLKSPVPRSEASECEREQKRRKVDIHSSPS HSSTVKDNLNELKDSSTKHYINHTTPTLSKSKEREVDKKDLDKSRERSREREKKEEKDRK ERKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRSNEKEREKSKSKSSGK EKGDSIKAEKMEKSSSGSKKESRHDKEKEKKEKRDSTGGKEEKKHHKSSDKHR NT seq 4842 nt NT seq  +upstreamnt  +downstreamnt atggcgaccatgctccctgccgagtggataaagaactgggagaaagggggcaggaacgag tttttgcagctatgtcgtgctctcagtgaagacaaaagccatgacagtctcagtttcaga gatatccaacaggctttgtatgagctttcatctcatgttgttagaggaaacttaaagcat gaacatgcatctggtgttctcgctgatattattgaatttcgtgaggacatgccttccatc ttagctgatgcattctgcatattagatattgaaacaagttgtttagaggaaaaaactaaa agggattgttttactcagctggtgttatcctgcttgtgcaaaacgtttagtggaatccag gagctggatggccaaacaaccttgtcgtgcaggaagtatcttgtatctgatactgtccta aaggagcgtttagatccagaaacactggaatcattaggacttatcaagcagtctcaacag ttcaaccagaaatctgttaaaataaagacaaaactattttacaagcaacagaaatttaat ttattacgagaggagaatgaaggttacgcaaagctgattgcagaactgggacaagaccta tctggaaatatcactagtgatttaatccttgaaaatatcaaatctttaataggatgtttt aaccttgatcctaaccgagttttggatattatcctagaagtttatgagtgcaggcctgag tacgatgatttctttgtaccactgatagagtcttacatgtacatgtgtgaacctcaaacg ctatgccatatccttgggttcaaattcaaattttatcaggatccaagtggtgagacacct tcctccctatacagagttgctgctgtcctattacaacataatctcatagatttggaagat ctttatgttcatcttcttccaggggataatgccatcattgaagaacacaagcgagagata gtggaagctaagcaaattgtgagaaaacttaccatggtagtcttatcctctgagaagact gaggaaaaggagaaggaaaaagaaaaagaggaggagaaaactgagaagcctccagataat cagaagcttggtttattggaagctttattaaaaattggtgattggcagcacgcacaaagt attatggatcagatgcctccattttatgctacttcacataagcctattgcgattgccctt tgccagcttgtacacgtgacaattgaacctttgtaccgcagggttggtgtaccaaaaggg gctaaagggtcaccaatttctcctttgccaaacaagagagcaccgaaacaagcagacagc tttgaagacttgagaaaggaagtgttcaacatgctgtgctaccttggtcctcatctctct catgatcccattttattcgcaaaagtggtgcgccttggaaaagcatttatgaaagagttt cagtctgatggaagcaagcaagaagataaagagaaaatggagatactgtttagctgcgtg ttgagtattaccgatcaagttctgcttccttctctttctttgatggactgcaatgcgtgc atgtctgaagaattatggggaatgttcaaaacatttccataccagtaccggtaccgtctt tatggacagtggaagaacgaaacatacaatagtcatccactcctagtgaaagttaaagct caaaccatagaccgagccaagtatataatgaagcgtctaactaaggaaaatgtgaaacca tctggaaggcagattgggaagctcagccatgccaatcctaccattttatttgattatatt ttatcacaaatacaaaaatatgataacttaataaccccagttgttgattcactgaaatac ctcacttcactgaattatgacgtcttggcatattgtatcattgaagctctggcaaacccc gagaaggagagaatgaagcatgacgacactactatctcgagctggctgcagagtctggct agcttttgtggtgctgttttcagaaaatacccaattgaacttgctggtctgcttcaatac gtagccaaccaattgaaagctgggaaaagctttgatttgcttattttaaaagaggtagtg caaaaaatggcagggatagaaattacagaagagatgacaatggaacagttggaagccatg actggtggagaacaactaaaagctgagggtggatactttggccaaattaggaatacaaag aagtcttctcagagattgaaggatgcattattggaccatgatcttgcccttccactctgc ctgcttatggctcaacagagaaatggtgtgatctttcaggaaggtggggaaaaacatctg aagctggtgggaaaactgtatgatcaatgccatgataccttggtacagtttggtgggttt ttggcatccaatctgagcacagaggattacattaagcgagtgccttcaattgacgttctt tgtaatgagtttcacacgcctcatgatgctgcatttttcctctcaagacccatgtatgcg caccaaatttcatcaaagtatgatgaacttaaaaaagctgaaaagggaaataaacagcaa cacaaagttcacaaatacatcacagcatgtgaactggtgatggctcctgttcatgaagct gtgatctctctgcaccctcccaaggtttgggatgacatcagtcctcagttttatgccacg ttctggtctctgactatgtatgaccttgctgtcccacatagcagctatgacagagaagtc aataaacttaaagtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaa aagaaaaaagaaaaagaacgttgcactgctcttcaggacaagctccttgaagaggagaag aaacagttagagcacgttcagagagttttacagaggctgaaattagagaaggataactgg cttctggcaaagtctaccaaaaatgagactatcacaaagtttttgcagttatgtatattt cctcgctgcattttttcggcaatagatgcggtttattgtgctcactttgtagaactggtt catcagcagaaaacacccaacttctccactcttctctgctatgatagagttttctctgat attatatatacagttgcaagttgcactgaaaatgaagctagtagatatggcaggttttta tgctgtatgctggagactgtgactagatggcacagtgacagagtcatatatgagaaggaa tgtggcaactatccaggcttcctaactatattacgagcaactggatttgatggtggaaat aaagctgatcaattggattatgagaattttagacacgtggtacacaaatggcactataaa ttaactaaggcttctgtacactgccttgaaactggtgaatatacacatatcagaaatatc ctgattgtgctgaccaaaatccttccatggtatccaaaagtgttgaacctgggccaagcc ttggaaagaagagtacataagatatgtcaggaagagaaagagaagagacctgatctatat gcgttggctatgggctattctgggcagttgaaaagtaggaagccttttatgatacctgaa aatgaattccaccacaaagacccacctgccaggaatgctgtagctgcaacagtacaaaat gggccaggtggtgctgggatgcctacatctctcacaataaatacggcgaaactggaggaa agtgctgctgaagagactgataaactaaaggagaagtctcagggtactgtgaaagtcatt aataaaactgtcaatgctacaccgaaggtgacaacaagcaatggaaacagtgcttctaat agcaaaattattaaagagaaagatgataaagaaaaaagcgggaaggaaaaagataaagaa aagaaagaaaagattccagctaccactccagagacgaaggcacttgggaaggatgggaaa gataaaccaaaggaagaacgggcaaacaaagatgataaaccaagagagattaaggagaaa acaccgaagtctgacaaagagaaggagaaggccaagaaagaagaaaaagcttcgaaggaa gaaaaatccaagacaattgttaccaccattgagtcaaagtcagttgcagaaaaggagaga gaaaaagagccatctagagaaaaagatgtagcaaaggatatgaaatccaaggaaaatact aaaggaggagaaaagattccagtagctgggtccttgaagtctcctgttccccgatcagaa gcatcagaatgtgagagggaacaaaaacgccgcaaagttgatatccattcttctccatca cattcctcaacagtaaaggacaacctcaacgaactcaaggactcttcaacaaagcactac attaaccacactactccaacactgtccaagagtaaagagagagaagtggacaagaaagac ttggacaagtcaagggaaagatccagagagagagagaagaaagaggaaaaggacaggaaa gaacgaaaaagggatcattccaacagtgaccgagaggtgccacaggattcaactaaacga cgcaaagaggaaaatgggacaacaggttcttcaaaacatagtaaaagtgaaagtccttct gattctcctcgttccaatgaaaaagagagggagaagagcaaatcaaaatcttcaggaaaa gaaaaaggtgattcaatcaaagcagaaaagatggaaaagagctcctctggtagcaaaaag gaatcaagacatgataaagaaaaagaaaagaaagaaaaacgagacagcactggagggaaa gaagaaaagaaacatcataaatcttcagacaagcacagataa

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