Gallus gallus (chicken): 422508
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Entry
422508 CDS
T01006
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
gga
Gallus gallus (chicken)
Pathway
gga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
422508 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
422508 (CNOT6L)
Enzymes [BR:
gga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
422508 (CNOT6L)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
422508 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
422508 (CNOT6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
422508
NCBI-ProteinID:
XP_015132105
CGNC:
7862
Ensembl:
ENSGALG00000010333
LinkDB
All DBs
Position
4:34947919..34982756
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AA seq
549 aa
AA seq
DB search
MPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTALHLND
NNLTRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQTLGLKGNPLSQDILSLYQDPDGTRKLLNYMLDNLAVHPEQLPPRPWITLKERDQILP
SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ
YFTLFLPALKERGYDGFFSPKSRAKIMSEQEKKHVDGCAIFFKTEKFSLVQKHTVEFNQV
AMANSEGSEAMLNRVMTKDNIGVAVVLEVHKELFGASIKSLHVDKQLLIVANAHMHWDPE
YSDVKLIQTMMFVSELKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVVEYLSNG
IVADNHKDFKELRYNECLMNFSGSGKNGASEGRITHGFQLKSAYENNLMPYTNYTFDFKG
VIDYIFYSNTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHPPLLPLV
NGVHLPNRR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctcccgatcctcgccgaatttacaccatcatgtcagca
gaagaggtagccaacgggaagaagtctcactgggctgaattagagatctcgggtagagtg
cggagcttaagtacgtcgctttggtcactgacgcacttgactgctctacacctcaatgac
aataatcttactcgcattccacctgatattgccaagcttcataatctggtttacctggat
ctgtcatccaacaaactcagaagtttaccagcagaactaggaaacatggtgtctctcagg
gaattgcttttaaataacaatctattacgggttttgccttatgaacttggacggctcttc
cagctacaaaccctaggtttgaaaggcaatcctttatcacaagatattctcagcctctac
caagatccagatggaacacgaaagctactgaactacatgcttgacaatctagcagttcat
ccagagcagctgcctccaaggccatggattactttgaaagaacgagaccaaattctgccc
tcagcttcattcacggttatgtgttacaatgtgttgtgtgataaatatgccaccaggcag
ctctatggctactgcccttcttgggcgctgaattgggagtacagaaaaaagggaatcatg
gaagaaattgtcaactgcgatgcagatatcattagtctacaggaagtggaaacggagcaa
tacttcactctttttctgccagccttgaaagaacgaggatacgatggattcttttctcca
aagtcacgtgccaaaatcatgtctgagcaggagaaaaaacatgtagatggctgtgcaata
ttcttcaaaactgaaaaattttcactggtgcagaagcatacagtggagttcaaccaggtg
gcaatggctaactctgaaggttcagaagctatgttaaatagagtgatgacgaaagacaac
attggagttgctgtggtgttagaagtgcacaaagaattatttggagcaagtattaaatct
cttcatgtggacaaacagctgctcattgtggccaatgcccacatgcactgggaccccgaa
tactcagatgtgaaactcattcagactatgatgtttgtctcagaactgaaaaatatcctt
gagaaagcctcaagcaggcctggtagcccaacagcagatcctaattctattcccctggtg
ctttgtgcggatcttaactcactgcctgattcaggtgtagtggaatacttaagcaacggc
atagtagctgacaaccacaaggacttcaaggagttgcgttacaacgagtgtctcatgaac
ttcagcggcagtggaaagaacggggcttctgaaggaagaattacgcatggcttccaactc
aagagcgcctatgaaaacaacttgatgccttacaccaattacacttttgatttcaaaggt
gtgattgactacattttctattccaacactcacatgaacgtgcttggtgtcctggggcct
ttggaccctcagtggctggttgagaacaacatcactgggtgtccacaccctcacatccct
tcagaccacttctcactgttaacacaactcgaactccatcctccgctcctgcctcttgtc
aacggtgtgcacttgcctaacaggaggtag
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