Gallus gallus (chicken): 422590
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Entry
422590 CDS
T01006
Symbol
AFF1
Name
(RefSeq) AF4/FMR2 family member 1 isoform X1
KO
K15184
AF4/FMR2 family member 1
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gga03021
]
422590 (AFF1)
Transcription machinery [BR:
gga03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
422590 (AFF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
422590
NCBI-ProteinID:
XP_004941155
CGNC:
8389
Ensembl:
ENSGALG00000043935
LinkDB
All DBs
Position
4:complement(45743233..45799215)
Genome browser
AA seq
1252 aa
AA seq
DB search
MMKTMAESCQRKVWLGERLVLKEVVKKPGLESPLQPEMGLRPKGASAAFPGSLYNEDRNL
LRLQERQRRNQEALQEKDKFLENTPLFPEPYKTNKEDELSSRIQNMLGNYDDLQDLINDR
CHQNLIGIPESDVPQFPQRKPDRPSFPEKTSRTLSSSFHHATRYPHMGPPVIAPPRPGHY
APHQKAQPGTGPAPGWHAKSHSSSSSWSQGQEHKRGRPDSHAGSHHNRTDRHPAGGGRAP
EPQATLLELSPLLPSLSSPVAPLSPLHSIQHTNSKSQKSSKGHGPAYTQSPQDRAVGSRE
NKSQDNSAVILAGTTQPSSQPFPPPLPSKTSAMQQKPTAYVRPMDGQEQAPVESPDLKPL
LEEYHGEPYENISDLKANTKAKLSKLNISSEPTEQTLPSDSQCVEEILKEMTHSWPPLLT
AIHTPSAAEPSKFPFPTKESQHIPSVAQNHKQYDAPSKTLPSSHPTISVLQEDLQLSDSE
ESGDDQVVEQPPSSLDPPSALQSQPESVASAHSNSTESGSSSDSDSSSDSSETESSSSDS
EANDPPRASAPEPDPPTSNKWQLDNWLTKVNPPAVPTESPSDTAHTDGHEEDKEQPVSNA
SSCEHAVPREPHERSSIRAAQAPQDVHLPTKLSCQKSPVRAEEPSQRQTVGIKRPSKPPV
HEEPKGGLKVESEPAPYEIGEQSSRDKPKPKTKSRSKSCDQKELKPRLQEAPKEKKHKSS
HHADANALPDHRPVSDVLVGSAQEPSTLKHLPEGQGTAPTRTNGHRSAAEVKEGFHKGKL
PVPTKEKKLLPPVRDVPGNPSLLVRIDLPLLSRVPQPPEKGNQKKRAEVKEHPGTKEQDL
EKKSTDTPDRSFKKRKREKEKDVDRKKRKLGKEAKSLQSSPNKDSCKLKARNASPETQNK
DLRQPLPLPPMSPTHPAPKPTKKAHKRPRSENGQPPATASSTALDASNHKDPSSTKQKKM
VEDHSEQVKGNKGSAGDVTNPLPVPSVPNGTSKPRRPQIKFERQHLSEYYLEEAKKMKHE
ADAMMDKTGKAFQYLDAALSFVEYGMALESNAVAPKPAYSIFADTIDLLKYVMTLKPFTD
VSASSHEHVFAVLCMRCQSLLHMAMFRYKRDTAIKYSRILNDHFKSSSRVTQAPSPCVAR
STGMPSPHSPVPSPARSMSSQQGSNGSNCGCNSIGSSVTIPSITSSYVNITSYVLYAYNI
WEHADALSKNNKEFFAELSTAVCPLALTSSMAEMVHYTRQGLHWLRLNTSTP
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaacgatggctgagagctgccagaggaaagtttggctgggagaacggctggtg
ctaaaggaggtggtgaagaaacctggtttagaaagtccattgcagcctgagatgggatta
cgtccaaaaggtgcctctgctgctttccctgggagcttgtacaatgaggacagaaacttg
ctgcgtcttcaggagagacagaggcggaatcaggaggctctgcaggagaaagacaagttc
cttgagaacaccccactctttcctgagccgtacaagactaataaagaggatgagttgtca
agccgtattcagaatatgctgggcaattacgacgacttgcaggatcttattaatgacaga
tgccatcagaatctcatagggataccagagagcgacgttcctcagttcccacaaagaaag
cccgaccgcccatccttccctgaaaagaccagccgtacgttatcgtcttcattccaccat
gcaacccgctatccacacatgggacccccggtcattgctcctccccgtccaggccactac
gctccccaccaaaaggcacaaccaggaacaggaccagctccaggctggcatgccaagagt
cacagctcgtccagcagctggagccaaggtcaggaacacaagcgtggcaggccggacagt
catgccggttctcaccacaacagaactgacaggcatcctgctggtggaggtcgtgctcct
gaacctcaggccactcttttggagctttccccgttgctgccgtctttgtcttctccagtg
gcacccctgtcacctctacattccatccagcacactaattccaagtcacagaagagcagc
aaaggtcatgggccggcctacactcaatcacctcaggaccgagcggtgggttcacgggag
aataaaagtcaggacaactcagccgttatcttggctggcaccactcagccttcctctcaa
ccctttcctccacctttgccatcaaaaaccagtgcaatgcagcagaaaccaactgcctac
gtcagaccaatggatggccaagagcaggctccggtggagtcaccggatctcaagcctcta
ctggaggaataccacggtgaaccgtatgaaaacatctcagatttgaaggcaaacaccaag
gccaaattatccaaattgaacatctcttccgagcccactgagcaaaccttgcccagtgat
agccagtgcgttgaagaaattttgaaggaaatgacacactcatggccacctctcttgaca
gctattcacacgccaagtgctgcagagccctccaagtttccctttccaacaaaggaatcg
cagcatatcccatctgtagcacagaatcacaagcagtatgacgcaccttccaaaacgttg
cctagttctcatccaacaatatcagtgctccaggaggacctgcagctcagtgatagtgaa
gagagtggtgacgaccaagttgttgaacagccaccttcttcacttgatcctccaagtgcc
ctgcagtcccagcctgagagcgtggcatcagcacattccaacagcacagagtcagggagc
agcagtgactcagacagctcttcagactcttcagagacagagagcagctcgagtgacagt
gaagccaacgaccctccaagagcgtcagctcctgagcccgacccaccaacttccaataag
tggcagcttgacaactggctcaccaaggtgaacccaccagcagtgccaacagaaagcccc
agcgacactgcccacacagatggccacgaggaggacaaggaacaacccgtcagcaacgct
tcctcctgcgagcatgctgtgccaagggaacctcacgagagaagctccatccgagcagcc
caggctcctcaggatgttcatcttccgaccaaacttagctgccagaagtctcctgtgcgc
gctgaggagccctcacagaggcagactgtggggatcaaaaggcccagcaagcctccagtg
cacgaggaacccaagggaggcctgaaggtggagagcgagcccgctccttatgagattgga
gagcagtcttccagagacaagccaaaacccaaaacaaaaagcagatccaaatcctgtgac
caaaaagaactgaaaccccggctgcaggaggctcctaaagagaagaagcacaagagctcc
caccacgccgatgccaatgccctgccggaccacagacccgtgagtgatgttctggtaggc
agtgcccaggagccttccactctcaaacacctccctgagggccagggcacagctcccacc
aggactaacggccacaggtctgctgctgaggtcaaggagggttttcacaaggggaagctt
cctgtgcccaccaaggagaagaagttgctgccaccggtgagggacgtgcctggcaatccc
agcctcctggttagaattgatctcccactcctgtcaagagttccccagcctcctgagaag
gggaaccaaaagaagagagcagaggtgaaggagcaccctggcaccaaggagcaggacttg
gagaagaaaagcacagacactcctgacaggtccttcaaaaagcgaaagagagaaaaggag
aaggacgtcgataggaagaaaaggaagttgggcaaagaggcaaaatcattgcagtcttca
cctaacaaagactcctgtaaattgaaagcacggaacgcttcgcctgagacccagaacaaa
gatctcaggcaacccctgccactgccgcccatgtctcccacgcatcctgcaccaaagcca
accaagaaggcccacaagaggcccaggagtgagaacggccagccgcctgccactgccagc
agcactgccctggatgcaagcaaccacaaggatccttcttccaccaagcagaagaagatg
gtggaagaccactctgagcaggtgaagggcaacaaaggatctgcaggggatgtcacaaat
cctttaccagtgccttctgtgccaaatggtacctccaaaccaaggagacctcagatcaag
tttgaaagacagcatttgtcagaatattacctggaagaggccaagaagatgaagcacgag
gctgatgccatgatggacaagactggaaaggcctttcagtacctcgatgctgccctttcc
tttgttgaatacgggatggccctggaatcgaatgcggtagcaccaaaacctgcttacagc
atctttgctgacacaatagatctcctcaaatacgtaatgacactaaaaccctttacggat
gtctcggcatcttcacatgaacacgtctttgctgtgttatgcatgcgctgccagtccctc
ctgcacatggcaatgtttcgttacaaaagagacactgcaataaagtattccaggatcctg
aatgaccacttcaagagttcttccagagtaacacaggcaccttctccatgtgttgcaaga
agcacaggcatgccttctcctcattctccagtgccctctcctgccagatctatgagttct
cagcagggatcaaatggtagcaattgtggttgcaacagcattggctcttcagtcaccatc
ccaagcatcacctcttcatacgtcaacatcacttcctatgtcctctatgcgtataatatt
tgggaacatgctgatgcactgtccaagaataataaggagttttttgctgaactcagcaca
gcggtgtgccctctggcactgaccagtagcatggccgaaatggtacactacactagacag
ggtttacattggctgagactgaacacaagtacgccttaa
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integrated database retrieval system
