Gallus gallus (chicken): 422621
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Entry
422621 CDS
T01006
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
gga
Gallus gallus (chicken)
Pathway
gga03020
RNA polymerase
gga03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
422621 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
422621 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gga03021
]
422621 (POLR2B)
03400 DNA repair and recombination proteins [BR:
gga03400
]
422621 (POLR2B)
Enzymes [BR:
gga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
422621 (POLR2B)
Transcription machinery [BR:
gga03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
422621 (POLR2B)
DNA repair and recombination proteins [BR:
gga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
422621 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
422621
NCBI-ProteinID:
NP_001006448
CGNC:
8655
Ensembl:
ENSGALG00000011387
UniProt:
Q5ZMN9
F1NCB0
LinkDB
All DBs
Position
4:complement(49178379..49197790)
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEARWIVISSYFDEEGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcggacgaagatatgcaatacgatgaagacgacgacgagatcacccccgat
ctgtggcaggaggcgcgctggattgtcattagctcctattttgatgaagaaggtttagtc
agacaacagctggattcttttgacgagtttattcagatgtctgtgcagagaattgttgaa
gatgctccaccgattgatttacaagcagaagcccagcatgccacaggagaagtggaagaa
ccaccccggtatctcctgaagtttgaacaaatctatctctccaaacctacgcactgggaa
agagatggagcaccatcacctatgatgcccaatgaagccaggctgagaaaccttacgtat
tcagcccccttgtacgtggatataactaaaacagttattaaagaaggggaagatcagtta
cagacacaacatcagaaaacttttataggaaaaattcccattatgttacgatcaacgtac
tgtttgttaaatggcttaactgaccgtgacctttgtgaactgaatgaatgccctctggat
ccaggtggctattttatcattaatggatcagaaaaggttctgattgctcaagaaaaaatg
gctacaaacacagtatatgtgtttgcaaaaaaagattccaaatatgcctacacgggagag
tgtcgatcttgtctggagaattcctctcgaccaacaagtactatatgggttagcatgcta
gccagaggtgggcagggtgcaaagaagagtgctattggtcagcgcattgtagcaacgttg
ccatatatcaaacaagaagtgccaatcataatcgtcttccgtgccctagggtttgtgtct
gacagggacattttagagcacatcatttatgattttgaagatccagaaatgatggaaatg
gttaagccatccctggatgaagcctttgtgattcaggagcaaaatgttgctctgaacttc
attggatcaagaggtgcaaagccaggcgtcaccaaggaaaagagaatcaagtacgctaag
gaagtcctgcagaaagaaatgcttccacacgttggtgtcagtgacttctgtgaaaccaag
aaggcctatttcctagggtatatggttcatagattgttgttggctgcactgggcagaagg
gagcttgatgacagagatcattatggcaacaaaaggctggatcttgctgggccactgctg
gcttttctgttcagaggaatgtttaagaatttgctgaaggaagtgagaatatatgcacag
aagtttattgacagagggaaggatttcaacttggagctggcaattaaaacgagaattatt
tctgatggtttgaaatactcactggccactggaaactggggtgatcagaagaaagctcat
caggccagagcaggtgtatctcaggtgttaaaccgcctgacttttgcatcaacactttcc
cacctgagacgcctgaattctccaattggtagagatggaaagctagcaaagcccaggcag
ctgcacaatacgctgtggggaatggtttgcccagctgagactccagagggtcatgcagta
ggacttgtgaagaacttagccctgatggcttacatttctgtggggtctcagccatcccca
attctggaattcttggaagagtggagtatggaaaacctggaagaaatatctccagcggcg
atcgcagatgctaccaagatttttgttaatggctgctgggtaggaatacacaaagatcca
gagcagcttatgaataccctaaggaagctccgtcgtcagatggatatcattgtgtcagag
gtctcaatgattagggatattcgtgagcgagaaatccgcatctatactgatgcaggcaga
atttgccgacctcttctaattgtagaaaagcagaagttactgttgaagaaaaggcatatt
gaccaactgaaggaacgagagtataacaactacagttggcaggaccttgtggccagtggt
gtcgtagagtacatcgatacactggaagaagagactgtgatgctggccatgactccagat
gacttgcaggagaagggtgttgcatattgttcaacatatacccactgtgagattcaccca
tccatgatcctgggagtgtgtgcatctattattcctttccccgatcacaaccagtctcct
aggaacacataccagtctgctatgggtaaacaggcaatgggagtctacattacaaacttc
cacgttcgtatggacacgctggcccatgttctgtactatcctcagaagccccttgtaaca
acgcgctccatggagtacttgcgatttagagagttaccagcaggtatcaattcaatcgta
gccattgcgtcatatacaggctataaccaggaagattctgtcatcatgaaccgttctgct
gtcgacagaggctttttcaggtctgtgttctatcgctcctacaaagagcaagagtccaag
aaaggctatgaccaagaggaagtttttgagaagcctacccgtgagacttgccaaggtatg
agacatgcaatctatgacaaactggatgacgacggtttgattgcacctggggtacgtgtg
tctggggacgatgtcatcattggcaaaacagtaactctgccagaaaacgaagatgaactg
gaaagcactaacaggcgcttcactaagagagactgtagcacttttctgcgaactagcgag
actggcattgtagatcaggtcatggtaacccttaaccaggaaggatataagttctgcaag
atcagggtacggtctgtaagaatccctcaaataggagataaatttgccagcaggcatggt
cagaaaggaacctgtggtatccagtacaggcaagaggatatgcccttcacctgtgagggc
atcacaccagatatcatcatcaacccccacgccatcccttcccgcatgaccattggtcac
ttgattgaatgtcttcaggggaaggtgtcggcaaacaagggagaaattggtgatgctaca
ccatttaatgatgctgtcaatgtgcagaagatttccaatcttctatcagattatggctat
catttaagaggaaatgaggtcctctacaatggcttcactgggcgaaaaatcacatcacag
atcttcattggtcctacgtattatcagcggctgaagcacatggtagatgacaaaattcat
tctcgtgcaagagggcccatccagatacttaacagacagcccatggaaggtagatctcgt
gatggcggccttcgttttggagaaatggaacgggattgtcagattgcccatggagcagcc
cagttcttgagagagaggctgtttgaggcgtcagatccgtaccaagtccacgtatgtaac
ctgtgtggaatcatggcaattgcaaacacaaggactcacacgtatgaatgccggggatgc
cgaaataaaacacagatatctttggttcgaatgccctacgcctgcaaactcctcttccaa
gaactgatgtctatgagcattgcacctcggatgatgagtgtttag
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integrated database retrieval system
