Gallus gallus (chicken): 423164
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Entry
423164 CDS
T01006
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
gga
Gallus gallus (chicken)
Pathway
gga04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
423164 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gga04121
]
423164 (RAG1)
Enzymes [BR:
gga01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
423164 (RAG1)
Ubiquitin system [BR:
gga04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
423164 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
Fusion_F0
Motif
Other DBs
NCBI-GeneID:
423164
NCBI-ProteinID:
NP_001026359
CGNC:
6004
Ensembl:
ENSGALG00000007938
UniProt:
P24271
A0A8V1A1U6
LinkDB
All DBs
Position
5:19742333..19745458
Genome browser
AA seq
1041 aa
AA seq
DB search
MSITSRMDLPEEIQHPYAKFSEWKFKLFKVRPFQKEPSDKSQCINKDQEQEVASTDKNIT
LHKDEEVPRGEKLILTQKDFMGNTQALEKDVNDMKIQDNTAHQNNLKQLCRICGVSFKTD
CYKRTHPVHGPVDDETLWLLRKKEKKATSWPDLIAKVFKIDVRGDVDTIHPTRFCHNCWS
IIHRKFSNTPCEVYFPRNSTMEWQPHSANCEVCHTPSRGVKRKSQPPNVQHGKRVKIIAE
RARVNRGIKNQVIKNKNVMKEITNCKNRHLSTKLLAVDYPADFIKSISCQICEHILADPV
ETTCRHLFCRTCILSCIRVMGCYCPSCWYPCFPTDLVTPVKSFLNILDSLSIRCPVPECD
EEILHGKYGQHFSNHKEMKDKELYNPINKGGRPRQHLLSLTRRAQKHRLRELKRQVKAFA
EKEEGGDIKAVCMTLFLLALRAKNEHKQADELEAIMQGRGSGLHPAVCLAIRINTFLSCS
QYHKMYRTVKAVTGRQIFQPLHALRTAEKALLPGYHPFEWKPPLKNVSTNTEVGIIDGLS
GLPLSIDDYPIDTIAKRFRYDTALVSALKDMEEEILEGMKAKNLDDYLNGPFTVVVKECC
DGMGDVSEKHGSGPAVPEKAVRFSFTVMNIAIDHENERIRIFEEVKPNSELCCKPLCLML
ADESDHETLTAILSPLIAEREAMKNSELLLEIGGILRTFKFIFRGTGYDEKLVREVEGLE
ASGSTYICTLCDATRLEASQNLVFHSITRSHAENLERYEIWRSNPYHESVDELRDRVKGV
SAKPFIETVPSIDALHCDIGNATEFYRIFQMEIGEVYKNPDATKEERKRWQLTLDKHLRK
KMKLKPMMRMSGNFARKLMSKETVEAVCELIKCEERHEALKELMDLYLKMKPVWRSSCPA
KECPELLCQYSYNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASE
GNESGNKLFRRFRKMNARQSKFYEMEDVLKHHWLYTSKYLQKFMNAHKTLRSQGFAIDPD
DGLGDSLPPEISLESNDSVEL
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataacatcacgaatggacctccctgaagagattcagcatccgtacgctaaattt
tctgaatggaaattcaagctgtttaaagtgaggccatttcaaaaagaaccttctgataaa
agccaatgcataaacaaggatcaagaacaagaggtagcttctacagacaaaaacatcacg
ctgcataaagatgaagaagttccaagaggagaaaagttaattctgacacagaaggacttc
atgggcaatacgcaagcacttgagaaagatgtcaatgacatgaaaatacaagacaacaca
gctcaccagaacaacctgaagcaactttgccgcatctgtggagtttcgtttaaaactgat
tgctacaagagaactcatccagtacatggaccagtagatgatgaaactctgtggctactg
agaaagaaagagaaaaaagcaacctcttggccagatcttattgcaaaagttttcaagatt
gatgtgagaggggatgttgacactatccatcccactcgattttgtcacaactgctggagt
attatccacaggaaattcagtaatactccatgtgaagtttattttcctaggaacagcacg
atggagtggcagccccactctgcaaactgtgaagtgtgccacacgcccagccggggagtc
aagagaaagagccaaccacccaacgtacaacatggcaaacgtgtgaagatcattgcagaa
cgtgctcgagttaacagaggcataaagaaccaagtgataaagaacaaaaatgtaatgaaa
gagattacaaactgcaagaacagacatctcagcaccaaactgcttgcagttgattatcca
gcagatttcattaaatccatctcttgccagatctgtgagcatattttggcagacccagtg
gaaacaacgtgtagacacttgttttgcagaacttgcattctcagttgcatcagagttatg
ggatgctattgcccttcctgctggtatccttgcttccctactgatctggtaaccccagtg
aaatccttcctgaacatccttgatagcctgagcataagatgccctgttccagaatgtgat
gaagagatcttgcacggaaaatatggccaacacttctctaaccacaaggagatgaaagat
aaagagctctataaccccataaataaaggtggccgaccaaggcagcatcttctgtctttg
accaggagagctcagaaacatcgtctgagagaactgaaacgtcaagtcaaggcttttgct
gagaaagaagagggtggtgatataaaggctgtatgcatgactttgttcctgctagcttta
agagcaaaaaacgaacacaagcaagcagatgaattggaggctataatgcaaggcagagga
tctggacttcatcccgctgtttgcctggcaatacgaatcaacacttttctcagctgtagc
cagtatcacaaaatgtaccgaactgtaaaagctgtcactgggaggcagattttccagcca
ctgcatgctcttcgcaccgccgagaaagccctcttaccaggttatcatccttttgaatgg
aaacctcccttgaaaaatgtatccactaacacagaagtgggaattatagatggactatca
ggactacccctctcgattgatgactacccaatagacacaattgcaaagagatttcgatat
gatacagccttggtttctgctttaaaggacatggaggaagaaatcttggagggcatgaag
gctaaaaacctggatgactatctgaatggtcccttcactgtggtagtaaaagagtgctgt
gacggaatgggagatgtcagcgagaagcatggaagtggtcctgctgtcccagagaaggct
gtacgcttttcatttacagtcatgaacattgctatagaccacgagaacgaaaggataagg
atctttgaagaagtaaagcccaattcagagttgtgttgcaaacccttgtgtcttatgctg
gctgatgaatcagaccatgaaactctgacagcaatcctgagccctctcatagcagagaga
gaggctatgaagaacagtgaactgcttcttgaaataggaggcatcctgagaacattcaaa
ttcatctttcgaggtacaggctatgatgagaaacttgtaagggaagtggaagggctggag
gcctcaggttccacttatatctgtaccctctgtgatgcaacccgcctagaggcctcccag
aatttggtcttccactccatcaccaggagccacgctgaaaatctggagcgatatgaaata
tggaggtccaacccatatcacgaatctgttgatgagctccgtgacagagtgaagggtgtt
tcggccaaaccttttatagagactgttccctccatagacgcgttgcactgtgacattggc
aacgcaacagaattttacaggattttccagatggagattggtgaagtctataagaatcct
gatgcgactaaagaggagaggaagaggtggcagttgactcttgacaaacatctcaggaag
aagatgaaattaaaacctatgatgaggatgagtgggaactttgctagaaagctcatgtcc
aaagagacagtagaggcagtatgtgaattaataaagtgtgaggaaaggcatgaagcccta
aaagaactaatggacctttatctgaaaatgaaaccagtatggcgatcttcgtgccctgcc
aaagagtgtccagaattgctgtgccagtacagctataattcacagcgttttgcggagctc
ctgtctaccaagtttaaatacagatatgagggcaagattaccaattatttccacaaaacc
cttgctcatgtacctgaaatcattgaaagagatgggtccattggtgcttgggcaagtgaa
ggaaatgagtccggaaacaaactatttaggaggttccggaaaatgaatgcgaggcagtcc
aaattctatgaaatggaggatgtcttaaagcatcactggctatatacctctaagtacctc
cagaagttcatgaatgctcataaaacgttaagaagccagggcttcgcaattgatccagat
gatggcttaggtgattctttgccaccggagatctctttggaaagcaatgattcagtggaa
ctctaa
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