Gallus gallus (chicken): 423207
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Entry
423207 CDS
T01006
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
gga
Gallus gallus (chicken)
Pathway
gga04140
Autophagy - animal
gga04148
Efferocytosis
gga05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
423207 (VPS18)
04148 Efferocytosis
423207 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
423207 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gga04131
]
423207 (VPS18)
Membrane trafficking [BR:
gga04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
423207 (VPS18)
Hops complex
423207 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-RING_Vps41
zf-RING_16
Lact-deh-memb
zf-RING_5
zf-RING_11
zf-ANAPC11
zf-RING_UBOX
zf-RING_2
zf_RING_Vps8
Nup54_57_C
STX17_N
DUF5600
zf-rbx1
DUF1664
KNOX2
Motif
Other DBs
NCBI-GeneID:
423207
NCBI-ProteinID:
NP_001186584
CGNC:
6443
Ensembl:
ENSGALG00000008496
UniProt:
A0A8V0ZV73
LinkDB
All DBs
Position
5:24519457..24528309
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AA seq
974 aa
AA seq
DB search
MASILDEYEDSLYRSASVQQSRASVGIPHSGYVNARLEKETPIFNKQRIDFTPPEKINSL
VVSSNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEAKVYKMFLDHTGSHLLIALNTSE
CLYLNRSVQKVRALSRWKGHLIESVGWNKFLGTETNTGPILVGTAQGQIYEAEISVSEGS
LFSTNPDQYFRLVYTLEEESGSAPVCCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTE
QQGFSSIFAMHADHLPSFREFPASFGFSEIAFYTPKLRSNPRSFAWMMGNGVLYGTLDYS
RPDSILSDERVWVYPSDIDITANKPISIVLTQFHFLLLLPDRVMAVCTLNEQVVFQDLFL
EKFGTLTRMIKDPMVQQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLNNL
KHSEKTQTTLLTTWLTELYLNWLGILEGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGSRLDARNLIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQ
QAIHNYLLSLYALCRPDSLLSYLEQAGTNPNRIHYDLKYALRLCAEHGHHHACVHIYKVM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
ALLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQK
KLAATSQPSKGHHRPKDADTASLGKGQQSREQIKADIDDIVAAECVYCGELMIRSIDKPF
IDPQKYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcttccattctggacgagtacgaggactccctgtatcgttccgcctccgtgcagcag
agccgcgccagcgtgggcatcccgcactccggatatgtgaatgcacgactggagaaggaa
acaccaatatttaacaagcaaaggattgattttactcctccagagaaaattaacagcttg
gtggtctcctctaaccagctctgtatgagccttggcaaagacacccttctcaggattgat
cttgggaagccagatgaacctaatcaagtagaattgggacgcaaagatgaagccaaagtc
tacaagatgtttttggaccacacaggctctcatctcctgatcgctctgaacaccagtgaa
tgcctttacctgaacagaagtgttcagaaagtacgagcgctctcccgctggaaaggccac
ttaattgaaagcgtgggctggaacaaatttcttggtacagagaccaacactgggcctatc
ctggtgggaacagcccaggggcaaatctacgaagctgaaatatctgtcagcgagggaagc
ctcttcagcactaatcctgaccagtacttccgactggtctatactctggaggaggaatcg
ggatctgcccctgtctgctgcttggagattgaacgagggatagaagggaaattttttatt
atagcaaccactcgaaagagacttttccagtttgtcggcaaagtgcctgaaggtacagag
cagcaaggcttcagctccatatttgctatgcacgctgaccacttgcccagcttcagggag
tttccagccagctttggattcagtgagatagccttttatactccaaaactgcgctccaac
ccacgctcctttgcctggatgatgggaaatggtgtcttatatgggacactggattatagc
cgtcctgattcaattttgagtgatgaacgggtctgggtttatccttctgatattgacata
actgcgaacaagccaatatccattgtgctcacccagttccactttctgttgctgctgcct
gatcgggtgatggctgtgtgcacgctgaatgagcaggttgtttttcaagatctgttcttg
gagaaatttggcacattgacgcgcatgatcaaggatcctatggtccagcagatctggatc
cacactgagaaagtcgtgttccgctatcacgtccagcgggaatctagagatgtgtggaag
atgtatatgaatatgaacaaatttgatttagccaaagaatattgtaaagaccgtccagag
tgcctagatattgtgctggcaaaagaagcagaacactgcttccaaaacaagaggtatcta
gacagtgccaagtgttatgcgctgacccagaattattttgaggaaattgcccttaagttc
attgaagccaagcaagaagaggccctgatggagtttctaattaagaagttaaataaccta
aagcattctgagaagacacagaccactttgctgaccacgtggctaacagagctgtacctg
aactggctaggtatactggaaggagatccctcgcagcgaaatctctatttggatacccgg
gagaagtttcgcaccttcctgagcagccctaagaacaaagactgtctgtttaataaccgg
gcatctatttatgagctcttggcgagccatggggacacagagcacatggtctattttgca
gtcatcatgcaggactatgagcgagtagtagctcatcattgccagcatgatgagtacgat
gaagctctaaacgtgctgtccaggcacagagatgagaaactgttctacaagttctctcca
gtcctcatccagcatattcccaagaaagtagttgatgcttggatttctatgggctccaga
ctggatgccaggaaccttattccagcccttgttaactatagccagagtgccagcactcag
cagatcaatgaagccattagatacatggagttctgtgtgtatcagttggaggaaacccag
caagctattcataactacctgctatctctctatgctttgtgtcggccagattcattgcta
tcatacctggaacaagcaggaaccaacccaaacaggatccactatgatctgaagtatgca
ctgcgcctatgtgcagagcatgggcaccatcatgcgtgtgtccatatttacaaagtgatg
gaattatatgaggaagctgtggatcttgcactacaggtggatgttgatcttgccaagtcc
tgtgcagatctccctgaagatgatgaggaactccggaagaagctctggttgaagattgct
cgccatgttgttcaggaagagaaggatgtcaagaaggcaatggcctgcctctccagctgt
gccctgctgaagattgaagatgtcctgccattctttccagactttgtcactattgaccat
ttcaaggaggctatctgtaattccctggaggactacaacaagcacattgaggagctgaaa
agggagatggaggaagccacgcagagtgccaagagaatccgagaggacatccaggaaatg
agaaataaatatggctctgttgaacctcaggaaaaatgtgctgcttgtgactttcctctt
ctaaaccgcccattttaccttttcctttgtggtcacatgtttcattatgactgtcttctc
caagcagtttttccaaaccttcctgcctataagcaggcaaagctagaagatcttcagaag
aagttggcagctaccagtcagccttccaagggccaccatcgtcccaaggatgcagatact
gctagtctggggaaggggcagcagagccgggaacagatcaaagctgacattgatgatatt
gtggcagctgaatgcgtgtactgtggtgagctgatgatccggtccattgacaaacctttt
attgatccccagaagtacgaagaggagatgcagagctggctgtag
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integrated database retrieval system
