KEGG   Gallus gallus (chicken): 423558
Entry
423558            CDS       T01006                                 
Symbol
WDHD1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gga03036]
    423558 (WDHD1)
Chromosome and associated proteins [BR:gga03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    423558 (WDHD1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Beta-prop_THOC3 Beta-prop_WDR5 Ctf4_C HMG_WDHD1 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_Aladin WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd Beta-prop_IFT140_1st Beta-prop_RIG_2nd ANAPC4_WD40 WD40_Gbeta Beta-prop_EML HMG_box Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_TEP1_2nd eIF2A Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_1st Beta-prop_HPS5 Tricorn_2nd Beta-prop_WDR75_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 HMG_box_2 Beta-prop_SCAP Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 423558
NCBI-ProteinID: XP_015143411
CGNC: 9261
Ensembl: ENSGALG00000012199
UniProt: A0A1D5PDL4
LinkDB
Position
5:56496120..56526813
AA seq 1123 aa
MPSEQKPMRYGHTEGHTDVCFDDSGSCIVTCGSDGDVRIWENLDDDDPKSINVGEKAYSC
ALKNGKLITAVSNNTVQIHTFPEGAPDGILTRFTMNANHVVFNSDGAKIAAGSSDFMVKV
VEVADSSKQKTFRGHDAPVLSLSFDPMDIYLASASCDGSVRVWKVEDQTCVTNWLLLQKC
NDVINAKSICRLAWQPGSGKLLAIPVDKVVKLYRRETWDNQVDLSDTSITQPLNVVVWSP
CGQYLAAGSVNGSIVVWKVETRECTERMKHEKSYSICGLAWHPRYEQIAYTDTEGNLGLW
EDIGDGKKPNDKVASTVTKDYEDLFDGDDDDYLNGDMIEPPSSPNTGANEDHGDDDDLMP
TSGHPRRAIIDDDDNSLDIGMIKANSNLLEKEEDDDDQIGGFPALPTSSTQQPFYDGPRP
TPRQKPFQSGSTPVHLMHRFMVWNSVGIIRCYNDEQDNAIDIEFHDTSIHHATHLPNSLN
HTMADLSTEAILLACESTEELASKLHCIYFSSWDANKEWTVDMPKDEDIEAICLGQGWAA
CATSALLVRLFTVGGVQKEIFCLPGPVVSMAGHGEQLMVIYHRGTGFDGDQCLGVQLMEL
GKKKKQILHGDPLSLTKKSYLVWVGFSAEGTPCYVDSEGIVRMLNRGLGNTWIPVCNTRE
HCKGKSDHYWVVGIHENPQQLRCIPCKGARFPPTLPRPAVAILPFTLPYCQVTTEKGQME
EQYWRSVVFHNYVDYLSKNGYELDENAKSQPVKEQQELLMKLFALSCKLEREFRCVELAD
LMTQNVVNLAIKYASRSRRLNLAQRLSEMAVEKASELATALEDEEEEEEEDFRTHLNAGY
STSATEWGRLPGRSAQQDQEMEEAEETNGYEEAEGTPEVPKQRPNPFSKAVSSAEVITPK
SAVIASSSQGRVNPFKVSSNKKDPLVPSSNVLDTMSKYSKKISSSRAVNKQSSPVIKPLI
PKPKSKQASAASFFQVRTPGSSEKRVGEREEKAGHEPPEVQVTAQDNTENKRPKTGFQMW
LEENRANILTDNPDLNEAEVIKEGMSRFRILSSEERMVWTEKAKGGAVTDLTEDKKRKRP
TAAEDEAKKNEEQKSEDSNVSKKKKPLDQATNVRLSSFAFKQS
NT seq 3372 nt   +upstreamnt  +downstreamnt
atgccgtcagagcaaaagccgatgcggtacggacacacggagggacacacggatgtgtgc
ttcgatgacagcggcagctgcatcgtaacttgtggcagcgatggtgatgttaggatttgg
gaaaacctggatgatgatgatccaaagtccattaacgttggagagaaggcttattcctgt
gctctgaagaatggcaaattgatcacagcagtatcaaacaatactgttcagatacacaca
tttcctgaaggagctccagatggcatccttactcgttttaccatgaacgcaaaccacgtt
gtctttaatagtgatggtgccaaaattgctgctggatctagtgacttcatggtcaaagtt
gtggaggtggctgatagcagcaagcagaaaacgttccgaggacacgatgctcctgtctta
agcctgtcttttgaccccatggatatttatctggcatcagcaagctgtgatggttctgtc
agagtatggaaagtggaagatcagacatgcgtgacaaactggctactgctgcagaaatgt
aatgatgtgataaatgctaaatcaatatgcaggcttgcctggcaacctggcagtggcaag
ctgctggcaattcctgtagataaagttgttaaactatacagaagagaaacctgggataat
caagttgatctatcagatacttccatcacacagcccttgaatgttgtggtgtggtctcct
tgtgggcagtacctggcagctggaagtgtgaatggaagtatagtggtgtggaaggtggaa
acccgggagtgcacagagaggatgaagcatgagaaaagttattcaatttgcggactggca
tggcatcccagatatgagcaaatagcttatacagatactgaaggaaatctgggattgtgg
gaagatattggtgatgggaagaaaccaaatgacaaggttgccagtactgttacaaaagac
tatgaagatctctttgatggagatgatgatgactatttaaatggagatatgattgaacca
ccatcttccccaaacaccggagctaatgaagatcatggtgatgatgatgaccttatgcca
acatcaggccatccaagacgggcaataattgatgatgatgataactcattagatattgga
atgataaaagctaattccaatctacttgaaaaggaggaggatgacgatgatcagattggt
ggctttccagctctgccaacatcatctacgcaacagcctttctatgatgggccaaggcca
acccccaggcaaaagccattccagtctggctccactcctgtacatctcatgcatcggttc
atggtttggaattcagttggtatcattcgttgttacaacgatgaacaagacaacgctatt
gatatagaatttcatgatacctccatacatcatgccacacacctgcctaactccctgaat
cacacaatggctgacctctctactgaagctattttactagcctgtgagagtacagaggaa
ctcgcaagcaagctccactgcatttattttagctcctgggatgcaaacaaggagtggaca
gtagatatgccaaaggatgaagatattgaagctatctgtctaggtcaaggctgggctgct
tgtgccactagtgccttgctggttcgactgtttacagttggaggagttcagaaagagata
ttctgtctcccaggtccagtggtgtctatggcaggacatggagagcagctgatggttatt
tatcaccgaggtactggatttgatggagaccaatgccttggagtacagctgatggagcta
ggaaagaagaagaaacaaattttgcatggagaccctctttctcttacgaagaagtcctat
ttggtgtgggttggattctcagcagaaggtaccccgtgttacgtggattctgaggggatt
gtgaggatgttgaatcgaggacttgggaacacttggattccagtgtgtaacacacgagag
cattgcaaaggaaaatctgatcattactgggtcgttggcatccatgaaaacccccagcag
ctcaggtgtattccttgcaaaggagcccgattccctccgacgcttccacgtcctgcagtg
gcaatattaccttttacactcccttactgccaagttacaacagaaaaggggcagatggag
gagcaatactggcgttcagttgtatttcacaactatgtggattacttatcaaaaaatggc
tacgagcttgatgaaaatgctaaaagtcagccagtgaaggaacagcaggagcttttgatg
aaattgtttgctctttcttgtaaactggagcgtgaattccgctgtgtggaacttgctgac
ctcatgacacaaaatgttgtgaatttagccatcaagtatgcatcccgctctcgaagacta
aatttagctcaacgactcagcgagatggctgtagagaaagcaagtgaattggcaacagca
ctggaagatgaagaggaggaggaggaggaggatttccgaactcacttgaatgctggttac
agcacctctgccacagagtggggccgactgccaggcagaagtgctcagcaggaccaagag
atggaagaggctgaggaaaccaatgggtatgaggaagcagaaggaactcctgaagtgcct
aagcagaggccaaatcctttctccaaagcagtctcttcagcagaggtgattactcctaag
tctgctgtaattgcatcaagcagccaaggacgagtgaatcccttcaaggtgtcatccaac
aaaaaggacccactggtcccctcatcaaatgttctagacactatgagcaaatactcaaag
aaaatttctagcagtcgagctgtaaacaagcagagctctccagttataaaacctttgatt
cccaagccaaagtccaagcaggcttccgcggcgtccttcttccaggtacgcacacctggc
tccagtgaaaaaagagtgggagaaagagaagaaaaagcaggacatgagccccctgaggtc
caagtcactgcacaggacaacactgaaaacaaaagaccaaaaacaggtttccagatgtgg
ctagaagagaacagagcaaacattttaacagataatcctgatctgaatgaagcagaagta
ataaaagaaggcatgagtcggtttaggattctgtcatccgaagaaagaatggtgtggact
gagaaagcaaaaggtggagcagtaactgatttaacagaagataaaaaacgaaagcgtccc
acagctgctgaagatgaggcaaaaaagaatgaggagcaaaaatcagaggactcaaatgta
tccaaaaagaagaagcctttagatcaagctaccaatgtcagattgtcctcttttgcattc
aagcagagctaa

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