Gallus gallus (chicken): 423655
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Entry
423655 CDS
T01006
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gga03036
]
423655 (JMJD1C)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
423655 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
423655
NCBI-ProteinID:
NP_001186475
CGNC:
2125
Ensembl:
ENSGALG00000002942
LinkDB
All DBs
Position
6:8516339..8663452
Genome browser
AA seq
2529 aa
AA seq
DB search
MAVAVETRPELVGKRFLCVGGGEEPAESGRWRAGVIRAVSQRDSHSPDLAVYVEFDDLEW
EKREWVKVYEDFATFLVEYQLVWAKRKDPSQTQGSKIKQIQWPALTFKPLVGKSVYDSIT
AVEFLVDKQLDFVTEDSAFQPYQDDVDSLNPVLRDNPQLHEEVKAWVKEQKVQEIFMQGP
YSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMVVMNDQVLEPQNVDPSMVQMTFLDDV
VHSLLKGENIGITSRRRSRSNQNSNTVHGHYTRAQANSPRPAMNSQTAPKQNSHQHQQQR
NTRPNKRKGSDSSMPDEEKVKEERFDYIGRGENPKNKNKHFLSKRRKPEEDEKKLNMKRL
RTDNISDYSESSDSEISNKRLTDSSSEQNSENELKSKNTSKINGEEGKSQTVERVEQTLT
DRRSPWDEVQEDKKREEPERLKSSLLDQQEKPSLHAAEQPTPYEQNSKDPHVQECNAEKH
HAAELKNEQFVPKPPTPKSVVDKTSKNSSEKESQDNAASTFGLQTVQKIESHSSDLKQQF
ANANFLEARKQEADQSWVSCVVNKMDLMQPGVVKANEHLNPEKEKVPYGSFMSSLNVASV
AEDSKLRKQSPVPDSVKSKPSASVDHPKTKSPDVKPKFTPSSDTVKSKVSSQNSHAPGLT
RSANKTDHDLPRSSFHPVPARVSALEATKSPLIIDKNEHFTVYRDPTLIGQETGTNHISP
FLHQHNYPLHSSSHRTCLNPNAHHPALTGSSHLLPGSSTQTPLSAINTHPLSTAPHHSVH
HPHLLPAVLPGVPAASLLGGHPRLETAHASSLSHLALAHQQQQQMLQHQSPHLLGQAHPS
ASYNQLGLYPIIWQYPNGTHAYSGLGLPSSKWVHPETPVNTEASLRRNTPSPWLHQPTPV
TSADSLGLLSHIPVRPSSAEPLRPLKLATHSSPPLSKSIVEHHKEELERKAFIEPLRSAT
TAPIKTELEQSRTQAAKESHMHRHFADPMLNQLPRPPQETGERLSKYKEEHRRILQESIE
VAPFTAKMKALEGERENYSRVTSLSSSPKSHSVKYDKDAERSVSELYKMKHSVPQSLPQS
NYFTTLSNSVVNEPPRSYPSKEASSAYVDKQTNCPSTAASPQSLPSYISSLSKPPPLIKH
QPESEGSVSKVPEQLSQSVQSHSVGSFRNDSRSPTQLSVSSSNTLRSMPALHRAPVFHPP
VHQNLEKKESSYSSLSPPTLTPVQPVNAGGGKIQELQKPPTLVPEPKEAQTVYKGSSDQN
LSEAWKSNNTAANEKVDWHGERASGKAQSATASVIVRPPSSTKYESVAAVQSTSKDRVSE
RSSAVTNQADCLKTAEARETGRVILPNMNSDSARTQYEKKFPAVSQGTVARSVTPTTAMI
CSTKMDVTTSAATTTSVLSWGSSEVTYSLSSTALACAPLESAGSRAAGQAAAPAQEHKGS
TPAPAAPAPGKAGSAAQPGPGFSTSADFVHLKKHKAALAAAQFRSSNPSETESNSVKNQT
FSTSLSLDSAIVCNTINKANSVGSGQTSQASQPNYHTKLKKAWLTRHSEEDKNTNKKENS
GNSVSEIIKPCTVNLIASTSNDLQNNIDSKILADKFVKEDKHPRRKAKRTYESGSESGDS
DESESKSEQRTKRQPKPTYKKKQNDLQRKKGDAEEEVKPNGVLSRSAKEKSKLKLQSGSN
TGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECRLIRSKKGEEPTHSPVF
CRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEALSLWTHENYEDDELDLETCKYILDIIGD
KFCQLVTSEKTAMSWVKKDAKIAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDC
YKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHSIRDKFEIKS
HCQCTSKQSMQAGKLPAMNGVSQVLQNVLNHSNKISLCMPESQQQNTPPKSETNGNTSPR
SDVSTDSKLTPPESQSPLHWLADLAEQKAREEKKENKECPSGKHSKEEKDQDNLESQNCK
SSPTASQNNEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTGTASGKSGRTMPNILDD
IIASVVENKIPPNRAPKINVKSEVKDEPKDDRKCIQDDGNKLYSDIQYSWICDKHVLWLR
DHKNNNNWKLFKECWKQGRPVLVSGMHKKMNFSLWKAESISLDFGNQQADILNCKDSIIS
NTNVKEFWDGFEDVSKRQKVKNGETALLKLKDWPSGEDFKAMMPARYEDLLKSLPLPEYC
SPEGKLNLASHLPGFFVRPDLGPRLCSAYGVAATKDHDIGTTNLHIEVSDVVNILVYVGI
AKGNGVLSKSGVLKKFEEEDLDDLLRKRLKDSSELPGALWHIYAGKDADKIREFLQKIAK
EQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTVIQFLGDAIILPAGALHQVQNF
HSCVQVTEDFVSPEHLVQSFHLTQELRLSKEEINYDDKLQVKNILYHAVKEMVRALKIHE
SEMEDMEEN
NT seq
7590 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctgtggagacgcggccggagctggtggggaagcggttcctgtgcgtcggc
ggcggagaggagccggcggagagcgggcgctggcgggccggggtgatccgcgccgtctcg
cagcgggactcccacagccccgacctggcggtatacgtggaatttgatgaccttgaatgg
gaaaagcgagaatgggttaaagtttatgaagattttgcaaccttcttggtggagtaccag
ctggtctgggcgaaaagaaaggacccaagccagactcagggatcaaagatcaaacaaatt
caatggcctgcattgacattcaagcccttggttggaaaaagtgtatacgattcgattact
gcagtagaattccttgtggacaaacagctggattttgtaactgaagatagtgcctttcag
ccctatcaggacgacgtagacagtctaaacccagttctcagggataacccgcagttacat
gaggaagtaaaagcctgggtaaaggagcaaaaggttcaggagatttttatgcaaggtccg
tactccttaaatggttatagggtgagagtgtacagacaggattctgccacccagtggttt
actgggatcattactcatcatgatctcttcacccgcactatggttgttatgaatgaccag
gtattagaacctcagaatgttgatccttctatggttcagatgacttttctagatgacgtt
gttcactctttgttgaaaggtgaaaatattggcatcacttcacgccggcggtctcgttcc
aaccagaacagcaacacagttcacggtcattatacacgtgcacaagcaaatagtcccaga
ccagcaatgaattcccaaactgcaccaaaacagaattctcaccagcaccagcagcagagg
aatactaggccaaataagcggaaaggttctgatagcagcatgcctgatgaagagaaggtg
aaagaggaaagatttgattatataggtcgaggagaaaaccccaaaaacaaaaataaacac
ttccttagtaaaagaagaaaacctgaagaggatgaaaagaaattaaatatgaagagactg
cggacagacaatatctcagattactctgagagcagtgactcagaaatctcaaataaaaga
ttaacagattcatcctcagagcaaaactcagagaatgagttaaaaagcaagaacacttca
aagataaatggagaagaaggaaaatctcaaactgttgagagagtagaacagacactaaca
gataggcggtctccatgggatgaagtacaggaggataaaaagcgtgaagagccagaaagg
ctgaagtcatcgctcttggatcagcaggaaaagccttctctccatgcagcagagcaaccg
acaccttacgagcagaattccaaggatccacatgttcaggagtgcaatgcagaaaaacac
cacgctgcagaattaaaaaatgagcagtttgtacccaaacctcctactccgaaaagtgtt
gttgataaaactagtaaaaacagctctgaaaaggagagccaggataatgctgcaagtacc
tttggattgcaaacggttcagaaaatagaatctcacagcagcgatttaaaacagcagttt
gcaaatgcaaatttccttgaagcacgaaagcaggaagctgatcaaagttgggttagctgt
gttgtaaacaaaatggatttgatgcaacctggtgttgtgaaagcaaatgaacatttaaat
cctgaaaaagaaaaagtgccgtatggctcgtttatgtcttcgttaaatgtagcttctgta
gcagaagacagtaaactgcgtaaacaaagtccagtccctgattctgtgaagtcaaaacct
agtgcttcagttgatcatcctaaaacaaagtcacctgacgttaagcctaaattcacccca
tcttctgatactgtgaagtctaaggttagttcccaaaacagccatgctcctggattaaca
aggtcagccaataaaaccgatcatgatttgcctaggtctagttttcatccagttccagct
agagttagcgctctagaagctactaaaagtcctcttatcattgacaagaacgaacatttc
acggtgtacagggaccccactctgattggacaagaaacaggaactaatcacatttcacct
tttttgcatcagcataattatcctctgcattcctcatcccaccgaacctgtttaaatcca
aatgctcatcatcctgcattaactggttcatcccatctgctgcctgggtcttcaactcag
acccccttgtctgctattaacactcacccccttagtaccgcccctcaccattccgttcat
caccctcatctacttcctgcagtgttgcctggagtgcctgctgcctccttgctgggtggc
cacccgcgactagagactgctcatgctagcagcctaagccatttggcattagcgcaccag
cagcagcaacagatgttacaacaccagtctccacatcttctcggacaagctcatccttct
gcttcctataatcagctagggctttatccaattatttggcagtatccaaatggaacacat
gcttactcaggactcggccttccctcctcgaaatgggtccacccagaaactcctgttaac
acagaggcttccttgagaaggaatactcccagcccgtggttacaccagcccacccctgtg
acctcagctgacagccttggattgctgagtcacattcctgtgcgaccatccagtgcggaa
ccccttcggcctctcaaactggcaacgcactctagtccgccattgtccaaaagcatagta
gagcatcacaaagaagaactggagaggaaagcatttattgaacctttacgttctgctacg
actgcaccgataaagacagagctggagcaaagcagaacacaggcagcgaaggagagccat
atgcacagacattttgcagatccaatgttgaaccagctgccaaggccgccacaggagaca
ggggagcgactgagcaaatacaaagaagaacacaggcgaatactccaagaaagtattgaa
gttgctccttttacagctaaaatgaaggcactggagggagagagagagaactattccagg
gtaacatccttatcttcaagtcccaaaagccattcagtaaagtatgacaaagatgcagaa
cgctctgtgtcagaactgtacaaaatgaagcattcggttccgcagagtttgccacagagc
aactatttcaccaccttgtctaatagtgtggtgaatgaaccaccaagatcttacccatcc
aaggaggcttcgagtgcatatgttgataagcaaactaattgtccttcaacagcagccagc
ccccagtctcttccttcttacatttcttcactctcaaagcctccccctctaattaagcac
caacctgagagcgagggctccgtgagcaaggtacctgagcagctttcacagtccgtgcaa
tctcactcggttggttcttttagaaatgacagcaggagccctactcagttgtcagtctca
tcttcaaatacactccgaagcatgcctgccttgcacagagcgcctgtgtttcatccccct
gtgcaccagaacctggagaagaaggaaagcagctacagcagcctttcacctcccactctg
acccctgttcaacctgttaatgccggtggtggtaagatacaggaattgcagaaaccacca
actttagtacctgaacctaaggaagctcagactgtttacaagggctcttctgatcagaat
ttatcagaagcgtggaagtctaacaacaccgccgctaatgaaaaggtggactggcatggt
gagagggcgagtggaaaagcacagtccgccactgcatctgttattgtacgtcctccttct
agcacgaaatacgagagcgtagcagcggtgcagtcaacttccaaagatcgagtcagtgag
agatcttcagctgtgacaaatcaagcagattgcctgaaaacagcggaagccagggagact
ggaagagtcattctgccaaatatgaactcagacagtgctcgcacacagtatgaaaagaaa
tttccagctgtctcacaaggcaccgttgctcgttctgtcacccctaccacagctatgatc
tgcagtaccaaaatggacgtgaccacatcggcggccacaactaccagtgtgttgagctgg
ggcagctcagaagtgacttattccttgtcaagcacagccctggcctgcgcgccgctggag
agtgccggctcgagagccgcaggtcaggcggcagcaccggcccaggagcacaagggcagc
actccagcgccagctgcacccgcccctggcaaggcaggcagcgctgcgcagcccggcccg
gggttctccacctctgccgacttcgtccatttgaaaaagcacaaggcggcgttggccgca
gctcagtttcgaagtagtaaccccagcgagaccgagtccaactctgtgaaaaatcagaca
ttttcaacctctctctccctagacagtgctatcgtctgtaatacaataaacaaagcaaac
tctgtaggcagtgggcaaacttcccaggcgagtcagccaaactaccacactaaactgaaa
aaggcttggctgacaaggcattcagaggaggataaaaacactaataaaaaagagaattca
gggaacagcgtttcagaaattattaagccgtgtactgtcaatttaatagcttctacatca
aatgatctgcaaaataacatagatagtaaaatcttggcagataagtttgtgaaggaagat
aagcaccctaggagaaaagcaaaacgaacttacgagtctggctctgaaagcggagactct
gatgaaagcgagagcaagtcagagcaaaggactaagaggcagcccaagccaacttataaa
aagaaacaaaacgatttgcagaggaaaaagggtgatgcggaggaagaagtaaaaccaaat
ggtgtccttagcaggagtgccaaagagaaaagcaagctgaagttgcagagcggcagtaac
actggaatacctcgctcggtgttaaaggattggcgcaaagtgaagaagctgaagcaaaca
ggagagtccttcttgcaggatgattcgtgctccgaaattggaccaaatttgcaaaaatgc
agagaatgtaggttaataagaagcaagaagggtgaagaaccaactcactcgccggtgttc
tgtaggttttactacttccgacggttatcttttagtaaaaacggagtggttaggatagat
ggtttctcctctcctgatcagtatgatgatgaggcactgagtttatggacgcatgaaaac
tatgaagatgatgaactggacctggaaacttgtaaatatattttagatatcataggggac
aagttttgtcagttggtaacatcggagaaaacagccatgtcctgggtgaaaaaagacgcc
aaaattgcatggaagagagcagtgagaggagtccgtgagatgtgtgatgcatgtgaagcc
acattatttaacatccactgggtctgccaaaaatgtggatttgtggtctgcctcgattgt
tacaaggcgaaggaaagaaaaagttctagagataaggaactgtacgcctggatgaagtgt
gtgaagggccagcctcatgatcacaagcacctgatgccaacacagattatcccaggctct
gttttgacagatcttctggatgctatgcacagtattagagacaaatttgaaataaagtcc
cactgtcagtgtactagcaagcaaagcatgcaagctggcaagctcccagcaatgaacggt
gtgtctcaggttttgcagaatgtccttaatcacagtaataaaatttctctgtgcatgcct
gagtctcagcagcagaacactcctccgaagtctgagacaaacggcaatacgagtccgagg
agcgatgtcagcacagacagcaagctgacgccgcccgaatcccagtcaccgctgcattgg
ttggctgatcttgcagagcagaaagccagagaagaaaagaaagaaaacaaagagtgtcct
tctggaaaacattcaaaggaggagaaagaccaggataatttggagtcccaaaactgcaaa
agctcccctactgcatcccagaacaatgagcagggctcaaccttacgagatctgttaaca
acaacagcaggcaaactgcgtctgggttctactgatgctggtattgcttttgctccggtt
tactccacgggaacagcaagtggcaagagtggaaggactatgccaaacattctcgatgac
atcattgcttcagtggtagaaaacaagattccaccaaatagagcaccaaagattaatgta
aaatctgaagtaaaagatgagccaaaggatgacagaaaatgtattcaggatgatggcaat
aagttgtacagtgatattcagtattcttggatctgtgataaacatgttttgtggctcaga
gaccataaaaacaacaacaactggaagctcttcaaagagtgctggaaacaagggaggcct
gttctagtgtccggtatgcataagaaaatgaacttcagcctgtggaaagctgagtccatt
agtctagattttggaaaccagcaagctgatatcttgaattgcaaagacagtattatttca
aacaccaacgtcaaggagttctgggatggttttgaagacgtttcaaaacggcagaaagtg
aaaaatggagaaacagctttactgaaattgaaagattggccttctggtgaagatttcaag
gctatgatgccagcaagatatgaagacttactaaaaagtttacccttgcctgaatattgt
agtccagaagggaaattgaatttggcttctcatctgccaggattttttgtccgtccagat
ttgggacccagactatgcagtgcttatggtgtggctgctactaaagatcatgatatagga
actacaaatctccatatagaagtttcggatgtagtgaacatcctcgtttatgttggcata
gcaaaaggaaatggagtactttccaagtcaggagtactgaagaagtttgaagaagaagat
ttggatgacctcttaaggaagcggttgaaagattcaagtgaattacctggtgctttatgg
catatttatgctggcaaagatgctgacaagatccgagaatttctgcagaagatagcaaaa
gagcaaggcttggaagttttaccagagcacgatccaatacgtgatcagagttggtatgtg
aacaaaaaacttcgccaaagacttcttgaggaatacggtgtaaaaacctgtacggttatt
cagtttcttggtgatgctattattctaccagcaggagcacttcatcaggtgcaaaatttt
cacagctgcgttcaagtaaccgaagactttgtgtctccagaacatcttgtacagtcattt
cacctaacacaggagctgaggctgtcaaaggaagaaatcaattatgatgataaactgcag
gttaaaaatatcttgtatcatgcagttaaagaaatggtgagagctttgaagatccatgaa
agtgaaatggaagatatggaagaaaactaa
DBGET
integrated database retrieval system
