Gallus gallus (chicken): 423693
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Entry
423693 CDS
T01006
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gga03009
]
423693
03036 Chromosome and associated proteins [BR:
gga03036
]
423693
Enzymes [BR:
gga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
423693
Ribosome biogenesis [BR:
gga03009
]
Eukaryotic type
Pre-60S particles
Helicases
423693
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
423693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
ERCC3_RAD25_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
423693
NCBI-ProteinID:
XP_015134204
CGNC:
52028
LinkDB
All DBs
Position
6:11498950..11508381
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AA seq
865 aa
AA seq
DB search
MRFHKCKRGVLHVQCGRQHTQRHPVTRGRSTHPVHHSPGGGSCGRGPQGVPERRRRLRPG
TRFRGAPGRGKPEEGTALRCRRKGRRSGRMGAAWGRAARLGLPAAVRAAAPPCARLRGGR
AAPVPGPLLLAAAALSPRAPAPRLAPHFLLAGAGRGPWNCGGEAGARSVTDLCGEQPSAM
PAAGPAASPAEPQAPAAAEPLRRGRRRKPKEDAKGKKPKRREKLKRRGKAEGEQSAPEES
GPGDGGLLQPPSAKKAKKSAEGNGAAEQNGSAPASGHGEAPAAEEPGSDAEELTEEAREG
AFSNFPLSPSTINLLKARGVKYLFPVQVKTFQPIYDGKDLIAQARTGTGKTFSFAIPLTE
KLQSVSQDEKRGRSPKVLVLVPTRELAIQVAKDFKNLTRKLSVACFYGGTPYKAQFDLLK
NGIDILVGTPGRIKDHIQNSKLDLSNVKHVVLDEVDHMLDMGFAEQVEEILGFAYKKGSE
NSPQTLLFSATCPRWVYDVAKKYMKGEYEQVDLIGKKTQRTATTVEHLAIQCRSSQRAEV
LGDIIQVYSGSHGRTIVFCETKKEANELALNSALKQEAQSLHGDIPQKQREVTLKGFRNG
VFEVLIATNVAARGLDIPEVDLVIQCSPPKDVDSYIHRSGRTGRAGRTGICICFYQRKEE
DLLKQVEQKAGITFRRIGVPSATDIIKASSDDAKKCLDAVPPSAIDYFRQSARELIEEKG
AVDALAAALAHISGASSIQQRSLLNSTAGFVTMVLQCSIEMRSMSYAWRGLKEQLGEEID
GKISAMRFLKGKTGVCFDIPVDELSHIQEQWRDTRRWQLAVAKELPELEEQPQDASRGPP
RFGGFKKNGRFGGWKQGRPPARALE
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttcacaagtgcaagagaggggtcctgcatgtccagtgcggacgtcagcacaca
cagcggcacccggttacacgaggccgcagcactcaccccgttcaccacagcccgggaggc
gggagctgcgggcgcggcccgcagggcgtcccggagcggaggaggcgactgcggcccggt
actcggttccggggcgctccgggtcgggggaagccggaggaagggaccgctctccggtgc
cggcggaaggggcggcgcagcggccgtatgggcgccgcgtggggccgtgcggcgcggctc
gggttgcccgcggcggtgcgggcggcggccccgccgtgcgcacggctgcgtggcgggagg
gccgcacccgtgccgggcccgctgctgctggcggcggcggctctgtcgccccgcgccccc
gcgccgcgcctcgctcctcacttcctgctcgcgggggcggggcgaggcccctggaactgc
ggcggcgaggcgggagcgcgttccgtcaccgacctctgtggggagcagccgtccgcaatg
cccgccgccgggcccgccgccagccccgccgagccgcaggcgcccgcggccgccgagccg
ctccgccgcggccgccggaggaagccgaaggaggacgccaaggggaagaagccgaagcgg
cgcgagaagctgaagcggcgcggtaaggcggagggcgagcagagcgcgccggaggagagt
gggccgggcgacggcgggctgctgcagccgccctcggccaagaaggcgaagaagagcgcg
gaagggaacggcgcggccgagcagaacgggtctgcacccgcatccggacacggcgaggca
cccgcggccgaggagcccggcagcgacgctgaggagctgacagaagaagccagagaaggc
gctttctccaattttcctctctccccaagcaccatcaacttgctcaaagctcgaggtgta
aaatacctgtttcctgtgcaagtgaagacttttcagcccatatatgatggcaaagacctg
attgctcaggctcggacaggaactgggaaaacattttcttttgctattccactgactgaa
aagcttcagagtgtctcacaagatgagaaaagaggccgttcaccaaaggtgctggttctg
gttccaaccagggaactggccattcaggtcgccaaggacttcaagaatctcacaaggaaa
ctctcagtggcatgtttttatggaggaactccgtataaagcgcagtttgatctccttaaa
aatggtattgatattcttgtgggaactcctggacggatcaaagaccacattcagaatagc
aagctggacctttccaacgtgaagcatgttgttttggatgaagttgatcacatgttagac
atgggctttgctgaacaagtagaagaaatcttaggatttgcttataagaagggttctgag
aacagcccacagacattgctgttttctgcaacttgtccacgctgggtatatgacgtggca
aaaaaatacatgaaaggtgaatatgaacaggtagacctgattggaaagaagactcagagg
actgccacgactgtggaacacttggctatacagtgtcgctcgtctcagagagcagaagtt
cttggggatatcattcaggtctacagtggaagccatgggaggacgattgtcttctgtgag
acaaaaaaggaagcaaatgagttggctttgaattctgcgctcaaacaggaagcccagtca
ttgcatggtgacattccacagaagcagagagaagttacactaaaaggctttagaaatggt
gtgtttgaggttctgattgcaaccaatgtagctgcccgtggcttggatattcctgaagtt
gacctggttatacaatgctcaccaccaaaagacgtcgattcctacatccatcgttctgga
cgcacgggtcgagctggccggacagggatctgtatttgtttctatcagaggaaggaagaa
gaccttctgaagcaggttgagcagaaagcgggaattacgtttaggcgtatcggtgttcca
tctgctacagatataattaaagcttccagtgatgatgctaagaagtgtttagatgccgtt
cctccttctgcaatagactacttcaggcagtcagctcgagagctcatagaggagaaaggg
gcagttgatgccctggcagcagctctagcccatatttctggggcatcttccatacagcag
cgctccttactcaactcaaccgcgggctttgtgaccatggtgttacagtgctcgatagag
atgcgctccatgagctatgcctggagagggctgaaggagcagcttggcgaggaaatagac
ggcaagatatctgcaatgcgtttcctcaaggggaagacaggggtgtgcttcgatatccct
gtggatgagctgagtcacatacaggagcagtggcgggacacgcggcgctggcagctggcg
gtggccaaggagctgcccgagctggaggagcagccacaggacgcgagccgcgggccgccg
cgctttggcggcttcaagaagaacggaaggttcggcggctggaagcagggccggccgccc
gccagggccctcgagtaa
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